© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7647 |
| Gene name | |
| Location | Contig_84:40900..41880 |
| Strand | + |
| Gene length (bp) | 980 |
| Transcript length (bp) | 921 |
| Coding sequence length (bp) | 921 |
| Protein length (aa) | 307 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09130 | DUF1932 | Domain of unknown function (DUF1932) | 2.5E-21 | 204 | 277 |
| PF03446 | NAD_binding_2 | NAD binding domain of 6-phosphogluconate dehydrogenase | 1.0E-08 | 12 | 136 |
| PF03807 | F420_oxidored | NADP oxidoreductase coenzyme F420-dependent | 1.6E-07 | 12 | 92 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P21336|Y7SR_METFE | Uncharacterized 28.5 kDa protein in 7S RNA 5'region OS=Methanothermus fervidus PE=4 SV=1 | 12 | 208 | 2.0E-09 |
| sp|P0ABQ2|GARR_ECOLI | 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1 | 12 | 142 | 3.0E-07 |
| sp|P0ABQ3|GARR_ECOL6 | 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=garR PE=3 SV=1 | 12 | 142 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050661 | NADP binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7647 MQQEQQQEQVVVGILSMGDMGAGIAKLLMAQGMAVVTNCQDRSQETMARAREAGVRVLWSDRALVEECDVVMSIV PPGKAEATADRVAQAAAGSGQCRISFYLDLNAVSPATSGRIEAAMGASGWIRFVDGCIIGGPPRRIDDGGAWWQP SVPISGPHAASLPAALCRALGTRRIEGSASGLKMCFAGLAKGFTALATQTLTTACQLGLGDELAREMEALLPAHW AAVQRGLPDMPPKAYRWVAEMDQIADTMRDNGAWPDDAAATFRGAAAVYRAVASQALPSHQSETRLTATQLAAAM AQRLGP* |
| Coding | >OphauB2|7647 ATGCAACAAGAGCAGCAGCAAGAACAAGTGGTAGTGGGCATACTGTCCATGGGAGACATGGGAGCTGGCATAGCC AAGCTGCTCATGGCGCAGGGCATGGCGGTTGTGACCAACTGCCAGGACAGAAGTCAAGAGACGATGGCTCGGGCA AGGGAAGCGGGCGTCAGGGTGCTATGGTCGGACAGGGCGCTGGTGGAGGAGTGCGACGTCGTCATGTCGATTGTG CCGCCGGGCAAGGCAGAGGCGACGGCAGACAGAGTGGCCCAGGCGGCGGCAGGCAGCGGGCAGTGCCGCATCAGC TTCTACCTTGATTTGAACGCCGTGTCGCCGGCAACGAGCGGGCGCATCGAGGCCGCCATGGGGGCGTCGGGCTGG ATTCGCTTCGTCGACGGATGCATCATTGGCGGGCCGCCTCGGCGAATAGACGACGGGGGCGCATGGTGGCAGCCC AGCGTTCCCATCTCGGGCCCGCACGCAGCGTCTCTGCCGGCGGCGCTGTGCAGGGCGTTGGGGACGCGGCGCATC GAGGGCAGTGCCAGCGGGCTCAAGATGTGCTTTGCCGGACTGGCCAAGGGCTTCACGGCGCTGGCGACGCAGACG CTGACGACGGCCTGCCAGCTGGGCCTGGGCGACGAGCTGGCCCGCGAGATGGAGGCGCTGCTGCCGGCGCACTGG GCGGCGGTGCAGCGCGGCCTGCCCGACATGCCGCCCAAGGCATACCGCTGGGTGGCCGAGATGGACCAGATTGCC GACACCATGCGTGACAATGGCGCCTGGCCCGACGACGCCGCCGCCACCTTTCGCGGCGCCGCAGCCGTCTATCGC GCCGTGGCCAGCCAAGCACTCCCGAGCCACCAGTCCGAGACGCGCTTGACTGCCACCCAGCTTGCTGCCGCCATG GCACAGCGCCTGGGCCCCTAG |
| Transcript | >OphauB2|7647 ATGCAACAAGAGCAGCAGCAAGAACAAGTGGTAGTGGGCATACTGTCCATGGGAGACATGGGAGCTGGCATAGCC AAGCTGCTCATGGCGCAGGGCATGGCGGTTGTGACCAACTGCCAGGACAGAAGTCAAGAGACGATGGCTCGGGCA AGGGAAGCGGGCGTCAGGGTGCTATGGTCGGACAGGGCGCTGGTGGAGGAGTGCGACGTCGTCATGTCGATTGTG CCGCCGGGCAAGGCAGAGGCGACGGCAGACAGAGTGGCCCAGGCGGCGGCAGGCAGCGGGCAGTGCCGCATCAGC TTCTACCTTGATTTGAACGCCGTGTCGCCGGCAACGAGCGGGCGCATCGAGGCCGCCATGGGGGCGTCGGGCTGG ATTCGCTTCGTCGACGGATGCATCATTGGCGGGCCGCCTCGGCGAATAGACGACGGGGGCGCATGGTGGCAGCCC AGCGTTCCCATCTCGGGCCCGCACGCAGCGTCTCTGCCGGCGGCGCTGTGCAGGGCGTTGGGGACGCGGCGCATC GAGGGCAGTGCCAGCGGGCTCAAGATGTGCTTTGCCGGACTGGCCAAGGGCTTCACGGCGCTGGCGACGCAGACG CTGACGACGGCCTGCCAGCTGGGCCTGGGCGACGAGCTGGCCCGCGAGATGGAGGCGCTGCTGCCGGCGCACTGG GCGGCGGTGCAGCGCGGCCTGCCCGACATGCCGCCCAAGGCATACCGCTGGGTGGCCGAGATGGACCAGATTGCC GACACCATGCGTGACAATGGCGCCTGGCCCGACGACGCCGCCGCCACCTTTCGCGGCGCCGCAGCCGTCTATCGC GCCGTGGCCAGCCAAGCACTCCCGAGCCACCAGTCCGAGACGCGCTTGACTGCCACCCAGCTTGCTGCCGCCATG GCACAGCGCCTGGGCCCCTAG |
| Gene | >OphauB2|7647 ATGCAACAAGAGCAGCAGCAAGAACAAGTGGTAGTGGGCATACTGTCCATGGGAGACATGGGAGCTGGCATAGCC AAGCTGCTCATGGCGCAGGGCATGGCGGTTGTGACCAACTGCCAGGACAGAAGGTGTGCCTCGGCTTGATGTTGC AGGAATTGGCGGTCGGCCACTGACCAAAGGCTGGCAGTCAAGAGACGATGGCTCGGGCAAGGGAAGCGGGCGTCA GGGTGCTATGGTCGGACAGGGCGCTGGTGGAGGAGTGCGACGTCGTCATGTCGATTGTGCCGCCGGGCAAGGCAG AGGCGACGGCAGACAGAGTGGCCCAGGCGGCGGCAGGCAGCGGGCAGTGCCGCATCAGCTTCTACCTTGATTTGA ACGCCGTGTCGCCGGCAACGAGCGGGCGCATCGAGGCCGCCATGGGGGCGTCGGGCTGGATTCGCTTCGTCGACG GATGCATCATTGGCGGGCCGCCTCGGCGAATAGACGACGGGGGCGCATGGTGGCAGCCCAGCGTTCCCATCTCGG GCCCGCACGCAGCGTCTCTGCCGGCGGCGCTGTGCAGGGCGTTGGGGACGCGGCGCATCGAGGGCAGTGCCAGCG GGCTCAAGATGTGCTTTGCCGGACTGGCCAAGGGCTTCACGGCGCTGGCGACGCAGACGCTGACGACGGCCTGCC AGCTGGGCCTGGGCGACGAGCTGGCCCGCGAGATGGAGGCGCTGCTGCCGGCGCACTGGGCGGCGGTGCAGCGCG GCCTGCCCGACATGCCGCCCAAGGCATACCGCTGGGTGGCCGAGATGGACCAGATTGCCGACACCATGCGTGACA ATGGCGCCTGGCCCGACGACGCCGCCGCCACCTTTCGCGGCGCCGCAGCCGTCTATCGCGCCGTGGCCAGCCAAG CACTCCCGAGCCACCAGTCCGAGACGCGCTTGACTGCCACCCAGCTTGCTGCCGCCATGGCACAGCGCCTGGGCC CCTAG |