Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|762
Gene name
LocationContig_116:2355..4511
Strand-
Gene length (bp)2156
Transcript length (bp)1854
Coding sequence length (bp)1854
Protein length (aa) 618

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 1.1E-11 263 439
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.1E-06 6 45

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 6 569 1.0E-11
sp|Q10086|YAO7_SCHPO Uncharacterized transcriptional regulatory protein C11D3.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.07c PE=3 SV=3 269 582 5.0E-07
sp|O94490|YC79_SCHPO Uncharacterized transcriptional regulatory protein C417.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.09c PE=3 SV=1 256 574 1.0E-06

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0060255 regulation of macromolecule metabolic process No
GO:0050789 regulation of biological process No
GO:0018130 heterocycle biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0009889 regulation of biosynthetic process No
GO:0003674 molecular_function No
GO:0009059 macromolecule biosynthetic process No
GO:0005488 binding No
GO:0008150 biological_process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0140110 transcription regulator activity No
GO:0010468 regulation of gene expression No
GO:0043170 macromolecule metabolic process No
GO:0046914 transition metal ion binding No
GO:0008152 metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0016070 RNA metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0003676 nucleic acid binding No
GO:0009058 biosynthetic process No
GO:0044238 primary metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0009987 cellular process No
GO:0019222 regulation of metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0051252 regulation of RNA metabolic process No
GO:0044237 cellular metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0050794 regulation of cellular process No
GO:1901363 heterocyclic compound binding No
GO:0044249 cellular biosynthetic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0065007 biological regulation No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 530 552 22

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|762
MPTRRRACDACYKRKIQCDAAQTDAQCNWCTHHGLDCTFGRVSSRNTKKRLMPTTGPQHDQRFDQRRLPSPCSTV
STPPLSLLSPPRSASRRTTNAVLGQIYFAGQNLAVFGSQNGIPQLTCQGEQWVYSRTGQQPCFQTSNARYDHGHT
QPSTAASYPGPSRCAYRGIEVRLPEPWAVQAMLQEYLSSDFSLVFPMVDGVLFQDVIRLAYKSEYPHSVEEQSAR
ACILAFICLRSSNVPESEPISAINIDACASQAQALLFNHLEDASIVTLQTLFMMVLYETCCGRFRSASMYHSLAC
RATFILGAHTLVLKPSDSGALSIEDRQDRLLRMLFWLCYIFDKDIALRSGQAPIINDEYCDLTPPEGSDQCRFQA
IVTGKDTGNLGENLSTPWFPGDLRASLLKSKTCRLLYSASSLRMSDAELLRTIRELDEELESWRLSVPHHIAPTL
AACKHRWLVPDADKHRSMLHIELHLNYYHLMNAIHTASGRCMVDGNGLGATGIQSSLELSVEASRSTLTYLSVAT
HRLLGETFWVFIFYPMSALMTVFFNILRNPLDDAASRDVELLSSSYDVIRSMPISRITRVERDYLQEVDAFIAEL
YRLGKCAISKSRAEQQV*
Coding >OphauB2|762
ATGCCGACTCGTCGGCGAGCATGTGATGCTTGCTACAAGCGCAAGATCCAATGCGACGCTGCCCAGACGGACGCA
CAGTGCAACTGGTGCACCCACCATGGGCTCGACTGCACCTTTGGCCGTGTAAGCAGCAGGAACACCAAGAAACGT
CTCATGCCTACAACTGGCCCGCAGCATGACCAGCGTTTTGACCAGCGCAGGCTGCCTTCGCCTTGTTCCACCGTT
TCTACGCCGCCGCTTTCACTGCTATCACCACCACGCTCTGCATCGAGACGCACCACCAATGCCGTCCTCGGGCAG
ATATACTTTGCCGGCCAGAATTTGGCAGTCTTTGGCTCCCAAAACGGCATCCCCCAATTGACTTGTCAGGGTGAA
CAATGGGTATACTCGAGAACGGGACAGCAACCTTGTTTTCAAACGTCAAATGCCAGATATGACCATGGGCACACA
CAGCCGTCGACAGCTGCCTCGTATCCGGGGCCGTCACGTTGTGCTTACCGGGGTATAGAGGTTCGGCTGCCCGAG
CCGTGGGCTGTACAAGCCATGCTTCAGGAATATCTAAGCTCCGACTTTAGCCTCGTCTTCCCCATGGTTGACGGT
GTCTTGTTTCAAGATGTAATCAGACTGGCCTACAAATCCGAATATCCACATTCAGTCGAAGAGCAAAGTGCTCGA
GCTTGCATATTGGCCTTTATATGTCTCAGAAGCTCAAACGTTCCCGAATCTGAGCCCATATCAGCCATCAACATT
GATGCCTGCGCCTCTCAAGCTCAAGCTTTGCTATTCAATCATCTCGAAGATGCCAGCATTGTCACCCTACAGACA
TTATTCATGATGGTCTTGTACGAGACGTGTTGTGGTCGTTTCCGCAGTGCTTCCATGTATCACTCTCTTGCCTGC
CGAGCCACCTTTATACTTGGTGCACACACTCTTGTACTGAAGCCTTCGGACAGTGGTGCATTAAGCATAGAAGAT
CGGCAGGATCGACTGCTTCGCATGCTCTTTTGGCTTTGCTACATTTTTGACAAGGATATTGCCTTGCGCTCAGGG
CAAGCTCCCATAATCAATGACGAGTACTGCGACCTTACCCCGCCAGAGGGCTCCGATCAATGCCGATTCCAAGCA
ATTGTTACTGGCAAGGACACGGGGAATCTAGGCGAAAATCTGTCGACACCTTGGTTCCCAGGGGACTTGCGAGCC
AGCCTCCTCAAATCCAAGACTTGTCGCCTATTATACTCTGCCTCTTCGCTACGAATGTCTGATGCTGAGCTCTTG
CGGACAATTCGCGAGCTGGACGAGGAGCTTGAGAGCTGGCGCTTGTCTGTTCCTCATCACATTGCACCCACCCTG
GCGGCGTGCAAGCACAGATGGCTGGTGCCAGATGCGGACAAGCACCGAAGCATGCTCCATATCGAATTGCATCTC
AACTATTATCATCTCATGAATGCCATACACACAGCTAGCGGTCGGTGCATGGTGGATGGAAATGGACTTGGCGCT
ACTGGAATACAGTCGAGCTTGGAGCTGTCTGTTGAAGCCAGCCGCTCAACACTGACGTATTTGAGCGTAGCGACT
CATCGATTGCTTGGTGAAACATTTTGGGTATTCATCTTTTATCCCATGTCTGCTCTCATGACGGTATTTTTCAAT
ATTCTGCGGAATCCACTCGACGACGCGGCATCACGGGATGTGGAGCTTCTTAGTTCGTCGTATGATGTGATTCGA
AGCATGCCAATCAGTCGCATCACACGCGTGGAAAGGGATTATCTGCAGGAAGTGGATGCATTTATTGCCGAGCTT
TACAGGCTGGGAAAATGCGCCATTTCCAAGTCTCGCGCAGAGCAGCAGGTTTAA
Transcript >OphauB2|762
ATGCCGACTCGTCGGCGAGCATGTGATGCTTGCTACAAGCGCAAGATCCAATGCGACGCTGCCCAGACGGACGCA
CAGTGCAACTGGTGCACCCACCATGGGCTCGACTGCACCTTTGGCCGTGTAAGCAGCAGGAACACCAAGAAACGT
CTCATGCCTACAACTGGCCCGCAGCATGACCAGCGTTTTGACCAGCGCAGGCTGCCTTCGCCTTGTTCCACCGTT
TCTACGCCGCCGCTTTCACTGCTATCACCACCACGCTCTGCATCGAGACGCACCACCAATGCCGTCCTCGGGCAG
ATATACTTTGCCGGCCAGAATTTGGCAGTCTTTGGCTCCCAAAACGGCATCCCCCAATTGACTTGTCAGGGTGAA
CAATGGGTATACTCGAGAACGGGACAGCAACCTTGTTTTCAAACGTCAAATGCCAGATATGACCATGGGCACACA
CAGCCGTCGACAGCTGCCTCGTATCCGGGGCCGTCACGTTGTGCTTACCGGGGTATAGAGGTTCGGCTGCCCGAG
CCGTGGGCTGTACAAGCCATGCTTCAGGAATATCTAAGCTCCGACTTTAGCCTCGTCTTCCCCATGGTTGACGGT
GTCTTGTTTCAAGATGTAATCAGACTGGCCTACAAATCCGAATATCCACATTCAGTCGAAGAGCAAAGTGCTCGA
GCTTGCATATTGGCCTTTATATGTCTCAGAAGCTCAAACGTTCCCGAATCTGAGCCCATATCAGCCATCAACATT
GATGCCTGCGCCTCTCAAGCTCAAGCTTTGCTATTCAATCATCTCGAAGATGCCAGCATTGTCACCCTACAGACA
TTATTCATGATGGTCTTGTACGAGACGTGTTGTGGTCGTTTCCGCAGTGCTTCCATGTATCACTCTCTTGCCTGC
CGAGCCACCTTTATACTTGGTGCACACACTCTTGTACTGAAGCCTTCGGACAGTGGTGCATTAAGCATAGAAGAT
CGGCAGGATCGACTGCTTCGCATGCTCTTTTGGCTTTGCTACATTTTTGACAAGGATATTGCCTTGCGCTCAGGG
CAAGCTCCCATAATCAATGACGAGTACTGCGACCTTACCCCGCCAGAGGGCTCCGATCAATGCCGATTCCAAGCA
ATTGTTACTGGCAAGGACACGGGGAATCTAGGCGAAAATCTGTCGACACCTTGGTTCCCAGGGGACTTGCGAGCC
AGCCTCCTCAAATCCAAGACTTGTCGCCTATTATACTCTGCCTCTTCGCTACGAATGTCTGATGCTGAGCTCTTG
CGGACAATTCGCGAGCTGGACGAGGAGCTTGAGAGCTGGCGCTTGTCTGTTCCTCATCACATTGCACCCACCCTG
GCGGCGTGCAAGCACAGATGGCTGGTGCCAGATGCGGACAAGCACCGAAGCATGCTCCATATCGAATTGCATCTC
AACTATTATCATCTCATGAATGCCATACACACAGCTAGCGGTCGGTGCATGGTGGATGGAAATGGACTTGGCGCT
ACTGGAATACAGTCGAGCTTGGAGCTGTCTGTTGAAGCCAGCCGCTCAACACTGACGTATTTGAGCGTAGCGACT
CATCGATTGCTTGGTGAAACATTTTGGGTATTCATCTTTTATCCCATGTCTGCTCTCATGACGGTATTTTTCAAT
ATTCTGCGGAATCCACTCGACGACGCGGCATCACGGGATGTGGAGCTTCTTAGTTCGTCGTATGATGTGATTCGA
AGCATGCCAATCAGTCGCATCACACGCGTGGAAAGGGATTATCTGCAGGAAGTGGATGCATTTATTGCCGAGCTT
TACAGGCTGGGAAAATGCGCCATTTCCAAGTCTCGCGCAGAGCAGCAGGTTTAA
Gene >OphauB2|762
ATGCCGACTCGTCGGCGAGCATGTGATGCTTGCTACAAGCGCAAGGCACGTTGAACAAGAAATTATGCTCGTCTT
GTTTTGTTTTGCTTTTTATGCTGGGTGCTTATGCAAGCCTCTTTCTCTCTCCAGATCCAATGCGACGCTGCCCAG
ACGGACGCACAGTGCAACTGGTGCACCCACCATGGGCTCGACTGCACCTTTGGCCGTGTAAGCAGCAGGAACACC
AAGAAACGTCTCATGTCAGTACATAGTCGTTTCTGCAGTCTGTCATGACGTAGTCTGACACTGTTTAGCCCCCTA
CTGACCCGCACGCAGGCCTACAACTGGCCCGCAGCATGACCAGCGTTTTGACCAGCGCAGGCTGCCTTCGCCTTG
TTCCACCGTTTCTACGCCGCCGCTTTCACTGCTATCACCACCACGCTCTGCATCGAGACGCACCACCAATGCCGT
CCTCGGGCAGATATACTTTGCCGGCCAGAATTTGGCAGTCTTTGGCTCCCAAAACGGCATCCCCCAATTGACTTG
TCAGGGTGAACAATGGGTATACTCGAGAACGGGACAGCAACCTTGTTTTCAAACGTCAAATGCCAGATATGACCA
TGGGCACACACAGCCGTCGACAGCTGCCTCGTATCCGGGGCCGTCACGTTGTGCTTACCGGGGTATAGAGGTTCG
GCTGCCCGAGCCGTGGGCTGTACAAGCCATGCTTCAGGAATATCTAAGCTCCGACTTTAGCCTCGTCTTCCCCAT
GGTTGACGGTGTCTTGTTTCAAGATGTAATCAGACTGGCCTACAAATCCGAATATCCACATTCAGTCGAAGAGCA
AAGTGCTCGAGCTTGCATATTGGCCTTTATATGTCTCAGAAGCTCAAACGTTCCCGAATCTGAGCCCATATCAGC
CATCAACATTGATGCCTGCGCCTCTCAAGCTCAAGCTTTGCTATTCAATCATCTCGAAGATGCCAGCATTGTCAC
CCTACAGACATTATTCATGATGGTGAGTTTTTAAAACAAGTAGTTGAGATATACGAGTGTAGTGGCACATGCCAC
CGAGGCTGACCAAGCCACAGGTCTTGTACGAGACGTGTTGTGGTCGTTTCCGCAGTGCTTCCATGTATCACTCTC
TTGCCTGCCGAGCCACCTTTATACTTGGTGCACACACTCTTGTACTGAAGCCTTCGGACAGTGGTGCATTAAGCA
TAGAAGATCGGCAGGATCGACTGCTTCGCATGCTCTTTTGGCTTTGCTACATTTTTGACAAGGATATTGCCTTGC
GCTCAGGGCAAGCTCCCATAATCAATGACGAGTACTGCGACCTTACCCCGCCAGAGGGCTCCGATCAATGCCGAT
TCCAAGCAATTGTTACTGGCAAGGACACGGGGAATCTAGGCGAAAATCTGTCGACACCTTGGTTCCCAGGGGACT
TGCGAGCCAGCCTCCTCAAATCCAAGACTTGTCGCCTATTATACTCTGCCTCTTCGCTACGAATGTCTGATGCTG
AGCTCTTGCGGACAATTCGCGAGCTGGACGAGGAGCTTGAGAGCTGGCGCTTGTCTGTTCCTCATCACATTGCAC
CCACCCTGGCGGCGTGCAAGCACAGATGGCTGGTGCCAGATGCGGACAAGCACCGAAGCATGCTCCATATCGAAT
TGCATCTCAACTATTATCATCTCATGAATGCCATACACACAGCTAGCGGTCGGTGCATGGTGGATGGAAATGGAC
TTGGCGCTACTGGAATACAGTCGAGCTTGGAGCTGTCTGTTGAAGCCAGCCGCTCAACACTGACGTATTTGAGCG
TAGCGACTCATCGATTGCTTGGTGAAACATTTTGGTAAGTGCTTTATATAGTCTTGATGTGCTCTGCGGCTCTGG
TATATTGGGACGCTAACAAGGGAAACAGGGTATTCATCTTTTATCCCATGTCTGCTCTCATGACGGTATTTTTCA
ATATTCTGCGGAATCCACTCGACGACGCGGCATCACGGGATGTGGAGCTTCTTAGTTCGTCGTATGATGTGATTC
GAAGCATGCCAATCAGTCGCATCACACGCGTGGAAAGGGATTATCTGCAGGAAGTGGATGCATTTATTGCCGAGC
TTTACAGGCTGGGAAAATGCGCCATTTCCAAGTCTCGCGCAGAGCAGCAGGTTTAA

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