Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7584
Gene name
LocationContig_82:44112..45147
Strand+
Gene length (bp)1035
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 8.9E-25 3 301
PF00324 AA_permease Amino acid permease 8.5E-09 20 210

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 29 302 4.0E-24
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 16 302 1.0E-16
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 5 302 3.0E-15
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 44 301 2.0E-14
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 5 302 2.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 29 302 4.0E-24
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 16 302 1.0E-16
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 5 302 3.0E-15
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 44 301 2.0E-14
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 5 302 2.0E-14
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 32 302 4.0E-10
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 12 302 1.0E-07
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 12 302 3.0E-07
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 43 271 9.0E-07
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 6 302 2.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0022857 transmembrane transporter activity Yes
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0005575 cellular_component No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 63 85 22
3 100 122 22
4 151 173 22
5 201 223 22
6 235 257 22
7 272 294 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7584
MCWVLVNIFAVRAIHYINSFALALHVFGFFIVIGVLAAFTKEKHNADFVFTALTNNSGWNSDFVAWSISLLPALY
AYMSVDTAIHFCEEVAEPRTVIPRVMILQAITTSLMTFPFIITVVFCLGNVDQILASPIALTSPFTQILINSTGK
VGLSCFLNSFSTFVAMTAGFDMWGAASRAIWSMARDNALPPRFAKLHPRWAVSVWANLAMIPPSILVFSIYIWNT
TAFYGIMSGVLVAFQLSYLIPIGINVFYATWSTPLTKGPFQLGRLSWAVHATGFVFGCFAALFMSFPASQPVTTI
SM*
Coding >OphauB2|7584
ATGTGCTGGGTCCTTGTCAACATATTTGCCGTCAGAGCCATCCACTACATCAACTCATTCGCATTGGCCTTGCAC
GTCTTTGGCTTCTTCATCGTCATTGGTGTTTTGGCAGCCTTTACCAAAGAAAAACACAATGCCGACTTTGTCTTT
ACAGCCTTGACCAACAACAGCGGCTGGAACAGCGATTTCGTGGCCTGGAGCATCAGCCTGCTGCCAGCCTTGTAC
GCTTACATGTCTGTCGATACAGCCATTCACTTTTGTGAAGAGGTTGCTGAGCCTAGGACTGTGATTCCGCGTGTT
ATGATTCTACAGGCAATCACAACTTCGCTCATGACCTTTCCCTTTATCATTACAGTCGTCTTTTGTCTAGGCAAT
GTTGACCAAATTCTGGCCTCGCCTATTGCTCTCACCAGCCCCTTTACCCAGATCCTTATCAACAGTACAGGCAAA
GTAGGCCTCTCATGCTTTCTCAACAGCTTCAGCACTTTTGTCGCCATGACAGCCGGATTCGACATGTGGGGCGCT
GCTTCGCGTGCCATTTGGTCCATGGCTCGTGATAATGCTCTGCCCCCGAGATTTGCAAAGCTGCACCCTCGTTGG
GCAGTGTCTGTTTGGGCCAATCTTGCCATGATACCGCCCTCAATACTAGTCTTTAGCATCTACATCTGGAACACG
ACTGCCTTTTACGGAATCATGTCTGGAGTCTTGGTCGCCTTTCAACTATCCTACCTGATACCCATTGGCATCAAT
GTCTTTTACGCCACCTGGAGCACACCATTGACCAAAGGCCCTTTTCAATTGGGGCGCTTGTCTTGGGCTGTGCAT
GCTACAGGATTCGTCTTTGGATGCTTCGCAGCCCTTTTCATGTCCTTTCCCGCGTCACAGCCCGTTACAACTATT
TCCATGTAA
Transcript >OphauB2|7584
ATGTGCTGGGTCCTTGTCAACATATTTGCCGTCAGAGCCATCCACTACATCAACTCATTCGCATTGGCCTTGCAC
GTCTTTGGCTTCTTCATCGTCATTGGTGTTTTGGCAGCCTTTACCAAAGAAAAACACAATGCCGACTTTGTCTTT
ACAGCCTTGACCAACAACAGCGGCTGGAACAGCGATTTCGTGGCCTGGAGCATCAGCCTGCTGCCAGCCTTGTAC
GCTTACATGTCTGTCGATACAGCCATTCACTTTTGTGAAGAGGTTGCTGAGCCTAGGACTGTGATTCCGCGTGTT
ATGATTCTACAGGCAATCACAACTTCGCTCATGACCTTTCCCTTTATCATTACAGTCGTCTTTTGTCTAGGCAAT
GTTGACCAAATTCTGGCCTCGCCTATTGCTCTCACCAGCCCCTTTACCCAGATCCTTATCAACAGTACAGGCAAA
GTAGGCCTCTCATGCTTTCTCAACAGCTTCAGCACTTTTGTCGCCATGACAGCCGGATTCGACATGTGGGGCGCT
GCTTCGCGTGCCATTTGGTCCATGGCTCGTGATAATGCTCTGCCCCCGAGATTTGCAAAGCTGCACCCTCGTTGG
GCAGTGTCTGTTTGGGCCAATCTTGCCATGATACCGCCCTCAATACTAGTCTTTAGCATCTACATCTGGAACACG
ACTGCCTTTTACGGAATCATGTCTGGAGTCTTGGTCGCCTTTCAACTATCCTACCTGATACCCATTGGCATCAAT
GTCTTTTACGCCACCTGGAGCACACCATTGACCAAAGGCCCTTTTCAATTGGGGCGCTTGTCTTGGGCTGTGCAT
GCTACAGGATTCGTCTTTGGATGCTTCGCAGCCCTTTTCATGTCCTTTCCCGCGTCACAGCCCGTTACAACTATT
TCCATGTAA
Gene >OphauB2|7584
ATGTGCTGGGTCCTTGTCAACATATTTGCCGTCAGAGCCATCCACTACATCAACTCATTCGGTATATACTCATAT
GCTCACATGCCCGCATACAAACTGACGAGACACAGCATTGGCCTTGCACGTCTTTGGCTTCTTCATCGTCATTGG
TGTTTTGGCAGCCTTTACCAAAGAAAAACACAATGCCGACTTTGTCTTTACAGCCTTGACCAACAACAGCGGCTG
GAACAGCGATTTCGTGGCCTGGAGCATCAGCCTGCTGCCAGCCTTGTACGCTTACATGTCTGTCGATACAGCCAT
TCACTTTTGTGAAGAGGTTGCTGAGCCTAGGACTGTGATTCCGCGTGTTAGTAAGTAGACCTTTTTTCCTCCATC
CTTGGCCCAAGGCGACACGGGACGCGAGCTGACAAGACACACGTCGTTTCAGTGATTCTACAGGCAATCACAACT
TCGCTCATGACCTTTCCCTTTATCATTACAGTCGTCTTTTGTCTAGGCAATGTTGACCAAATTCTGGCCTCGCCT
ATTGCTCTCACCAGCCCCTTTACCCAGATCCTTATCAACAGTACAGGCAAAGTAGGCCTCTCATGCTTTCTCAAC
AGCTTCAGCACTTTTGTCGCCATGACAGCCGGATTCGACATGTGGGGCGCTGCTTCGCGTGCCATTTGGTCCATG
GCTCGTGATAATGCTCTGCCCCCGAGATTTGCAAAGCTGCACCCTCGTTGGGCAGTGTCTGTTTGGGCCAATCTT
GCCATGATACCGCCCTCAATACTAGTCTTTAGCATCTACATCTGGAACACGACTGCCTTTTACGGAATCATGTCT
GGAGTCTTGGTCGCCTTTCAACTATCCTACCTGATACCCATTGGCATCAATGTCTTTTACGCCACCTGGAGCACA
CCATTGACCAAAGGCCCTTTTCAATTGGGGCGCTTGTCTTGGGCTGTGCATGCTACAGGATTCGTCTTTGGATGC
TTCGCAGCCCTTTTCATGTCCTTTCCCGCGTCACAGCCCGTTACAACTATTTCCATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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