© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|7550 |
| Gene name | |
| Location | Contig_81:29732..31538 |
| Strand | - |
| Gene length (bp) | 1806 |
| Transcript length (bp) | 1536 |
| Coding sequence length (bp) | 1536 |
| Protein length (aa) | 512 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.6E-61 | 28 | 470 |
| PF00324 | AA_permease | Amino acid permease | 9.5E-22 | 46 | 490 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 1 | 488 | 1.0E-68 |
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 2 | 500 | 9.0E-66 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 5 | 494 | 3.0E-58 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 5 | 495 | 3.0E-52 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 4 | 490 | 2.0E-44 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 1 | 488 | 1.0E-68 |
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 2 | 500 | 9.0E-66 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 5 | 494 | 3.0E-58 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 5 | 495 | 3.0E-52 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 4 | 490 | 2.0E-44 |
| sp|Q9C0Z0|YKM2_SCHPO | Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 | 3 | 506 | 2.0E-44 |
| sp|Q10087|YAO8_SCHPO | Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 | 2 | 494 | 5.0E-43 |
| sp|O59942|AAP2_NEUCR | Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 | 7 | 493 | 3.0E-40 |
| sp|P36029|TPO5_YEAST | Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 | 5 | 493 | 5.0E-39 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 5 | 490 | 1.0E-37 |
| sp|P32837|UGA4_YEAST | GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 | 4 | 470 | 6.0E-37 |
| sp|Q09887|YC9D_SCHPO | Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 | 5 | 499 | 2.0E-34 |
| sp|P53744|BIO5_YEAST | 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 | 4 | 469 | 3.0E-33 |
| sp|O74248|GPT1_CANAX | Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 | 5 | 495 | 2.0E-27 |
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 2 | 480 | 8.0E-27 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 5 | 487 | 3.0E-22 |
| sp|P0AAE0|CYCA_ECOLI | D-serine/D-alanine/glycine transporter OS=Escherichia coli (strain K12) GN=cycA PE=1 SV=1 | 164 | 345 | 9.0E-06 |
| sp|P0AAE1|CYCA_ECO57 | D-serine/D-alanine/glycine transporter OS=Escherichia coli O157:H7 GN=cycA PE=3 SV=1 | 164 | 345 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 109 | 131 | 22 |
| 4 | 146 | 168 | 22 |
| 5 | 175 | 197 | 22 |
| 6 | 220 | 237 | 17 |
| 7 | 258 | 280 | 22 |
| 8 | 308 | 330 | 22 |
| 9 | 363 | 382 | 19 |
| 10 | 387 | 409 | 22 |
| 11 | 429 | 451 | 22 |
| 12 | 461 | 483 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7550 MEVLSDEERLAQLGVKQELQRTYSLPALAALCVCLMATWEALSSVIAAALVSGGPPCLFYNYVASFLCTVCIAAS LAEIASMYPTAGGQYHWVAALCPSRTKLAASFATGWISIGGQIVFTASAAFAAGLQAQALITLNVDSYEPVRWQG VLFYWGILLYAGALNIGGMRLMPHINLISGVIHIVAFVAICIVLGVMAQKNTAEFVFTEFVNGSGWNSDVISWLV GLLSTVYPFLGYDAATHLAEELPNASRNVPLAMLGSVMVNGLMGFIYTILLLFSAGSLESLVSTPTGFPYMQIFL DATKSRAAVTVLSLNLVLVATAATIAGVTSTSRTLWAFARDKATPCHEYLSAVNPSVQLPVRAVLVVLVFQFLLG LIYIGNATAFNAILSMAIIGLYLSYTLPIYYMFFYGRRKLRREDYGPFRLKPWIGNIFNVVAMIWMLIAMFFSTF PTTYPVTAENMNYCVVVLAGWGSFGLFYYLFAGKKKFQLPITDVSVIAADEPASVGFSEKN* |
| Coding | >OphauB2|7550 ATGGAGGTGCTTTCAGATGAAGAGCGACTGGCTCAGCTCGGAGTCAAGCAAGAACTGCAGCGGACATACTCACTG CCAGCCTTGGCCGCGCTGTGCGTGTGCTTGATGGCAACATGGGAAGCCCTTTCCAGTGTCATTGCTGCCGCTCTG GTCAGCGGCGGACCGCCTTGCTTGTTCTACAACTATGTCGCTTCATTCCTTTGCACCGTCTGCATAGCGGCTTCA CTCGCCGAAATTGCGTCCATGTATCCAACTGCCGGAGGACAATATCACTGGGTTGCTGCACTATGTCCCTCGCGC ACAAAGCTGGCGGCGTCGTTTGCCACTGGCTGGATATCTATCGGTGGACAGATAGTCTTCACCGCATCCGCCGCC TTTGCTGCCGGTCTTCAGGCACAGGCGCTCATAACCCTTAATGTTGATTCGTACGAGCCAGTACGCTGGCAAGGC GTTCTCTTCTACTGGGGCATTTTGCTCTATGCTGGCGCTCTCAACATTGGGGGAATGAGGCTCATGCCTCACATC AACCTGATATCCGGTGTCATCCACATCGTCGCCTTTGTCGCCATTTGCATTGTTCTTGGAGTCATGGCTCAGAAG AATACGGCGGAATTTGTCTTTACCGAGTTTGTCAATGGCAGTGGCTGGAATTCAGACGTTATTTCTTGGCTCGTC GGTCTTCTCAGTACCGTATATCCATTCTTGGGCTACGATGCTGCAACTCACTTGGCAGAAGAACTACCCAACGCT AGCCGCAACGTTCCTTTGGCCATGTTGGGCAGTGTCATGGTCAACGGCTTGATGGGCTTTATTTACACCATCCTG CTCTTGTTCTCGGCAGGCTCGCTTGAAAGTCTTGTGAGCACGCCCACCGGATTTCCCTACATGCAAATCTTCCTC GACGCGACGAAATCCCGGGCAGCCGTTACCGTCCTTTCTCTCAATCTCGTCCTCGTTGCCACGGCCGCCACTATT GCTGGAGTCACATCTACCTCTCGTACTCTTTGGGCTTTTGCCCGTGACAAGGCAACCCCATGTCACGAGTATCTG AGTGCTGTAAATCCCTCAGTCCAGCTTCCCGTTCGCGCCGTTCTTGTCGTCCTTGTTTTCCAATTCCTCCTCGGT CTGATTTATATTGGGAACGCGACTGCATTCAACGCCATTTTGTCCATGGCAATCATCGGTCTTTACCTCTCATAT ACACTGCCCATCTATTACATGTTTTTCTACGGCCGCCGCAAGCTGAGAAGGGAAGACTATGGCCCCTTCCGCCTC AAGCCCTGGATTGGAAACATCTTCAACGTCGTGGCCATGATTTGGATGTTGATTGCCATGTTCTTTAGCACCTTT CCCACGACATACCCCGTCACAGCGGAGAATATGAATTACTGCGTTGTTGTTCTCGCTGGTTGGGGTAGTTTTGGC TTGTTTTACTATCTGTTTGCCGGTAAGAAGAAGTTTCAACTCCCAATTACCGATGTGTCAGTCATTGCTGCAGAC GAGCCGGCTTCGGTTGGATTTTCAGAAAAGAATTAA |
| Transcript | >OphauB2|7550 ATGGAGGTGCTTTCAGATGAAGAGCGACTGGCTCAGCTCGGAGTCAAGCAAGAACTGCAGCGGACATACTCACTG CCAGCCTTGGCCGCGCTGTGCGTGTGCTTGATGGCAACATGGGAAGCCCTTTCCAGTGTCATTGCTGCCGCTCTG GTCAGCGGCGGACCGCCTTGCTTGTTCTACAACTATGTCGCTTCATTCCTTTGCACCGTCTGCATAGCGGCTTCA CTCGCCGAAATTGCGTCCATGTATCCAACTGCCGGAGGACAATATCACTGGGTTGCTGCACTATGTCCCTCGCGC ACAAAGCTGGCGGCGTCGTTTGCCACTGGCTGGATATCTATCGGTGGACAGATAGTCTTCACCGCATCCGCCGCC TTTGCTGCCGGTCTTCAGGCACAGGCGCTCATAACCCTTAATGTTGATTCGTACGAGCCAGTACGCTGGCAAGGC GTTCTCTTCTACTGGGGCATTTTGCTCTATGCTGGCGCTCTCAACATTGGGGGAATGAGGCTCATGCCTCACATC AACCTGATATCCGGTGTCATCCACATCGTCGCCTTTGTCGCCATTTGCATTGTTCTTGGAGTCATGGCTCAGAAG AATACGGCGGAATTTGTCTTTACCGAGTTTGTCAATGGCAGTGGCTGGAATTCAGACGTTATTTCTTGGCTCGTC GGTCTTCTCAGTACCGTATATCCATTCTTGGGCTACGATGCTGCAACTCACTTGGCAGAAGAACTACCCAACGCT AGCCGCAACGTTCCTTTGGCCATGTTGGGCAGTGTCATGGTCAACGGCTTGATGGGCTTTATTTACACCATCCTG CTCTTGTTCTCGGCAGGCTCGCTTGAAAGTCTTGTGAGCACGCCCACCGGATTTCCCTACATGCAAATCTTCCTC GACGCGACGAAATCCCGGGCAGCCGTTACCGTCCTTTCTCTCAATCTCGTCCTCGTTGCCACGGCCGCCACTATT GCTGGAGTCACATCTACCTCTCGTACTCTTTGGGCTTTTGCCCGTGACAAGGCAACCCCATGTCACGAGTATCTG AGTGCTGTAAATCCCTCAGTCCAGCTTCCCGTTCGCGCCGTTCTTGTCGTCCTTGTTTTCCAATTCCTCCTCGGT CTGATTTATATTGGGAACGCGACTGCATTCAACGCCATTTTGTCCATGGCAATCATCGGTCTTTACCTCTCATAT ACACTGCCCATCTATTACATGTTTTTCTACGGCCGCCGCAAGCTGAGAAGGGAAGACTATGGCCCCTTCCGCCTC AAGCCCTGGATTGGAAACATCTTCAACGTCGTGGCCATGATTTGGATGTTGATTGCCATGTTCTTTAGCACCTTT CCCACGACATACCCCGTCACAGCGGAGAATATGAATTACTGCGTTGTTGTTCTCGCTGGTTGGGGTAGTTTTGGC TTGTTTTACTATCTGTTTGCCGGTAAGAAGAAGTTTCAACTCCCAATTACCGATGTGTCAGTCATTGCTGCAGAC GAGCCGGCTTCGGTTGGATTTTCAGAAAAGAATTAA |
| Gene | >OphauB2|7550 ATGGAGGTGCTTTCAGATGAAGAGCGACTGGCTCAGCTCGGAGTCAAGCAAGAACTGCAGCGGACATACTCACTG CCAGCCTTGGCCGCGCTGTGCGTGTGCTTGATGGCAACATGGGAAGCCCTTTCCAGTGTCATTGCTGCCGCTCTG GTCAGCGGCGGACCGCCTTGCTTGTTCTACAACTAGTACGTCAGCATGCACTTTGGGTGCTCGAGAAGCCCTTCC TGCCGGGCATCACTGACAGTAATGGCCATGGTTTAGTGTCGCTTCATTCCTTTGCACCGTCTGCATAGCGGCTTC ACTCGCCGAAATTGCGTCCATGTATCCAACTGCCGGAGGTATGTTGAAATTTGAGTACTGTTGAAACTCACACAT TTACTCAAAAAACTTATTCTTTCCCATCATAGGACAATATCACTGGGTTGCTGCACTATGTCCCTCGCGCACAAA GCTGGCGGCGTCGTTTGCCACTGGCTGGATATCTATCGGTGGACAGATAGTCTTCACCGCATCCGCCGCCTTTGC TGCCGGTCTTCAGGCACAGGCGCTCATAACCCTTAATGTTGATTCGTACGAGCCAGTACGCTGGCAAGGCGTTCT CTTCTACTGGGGCATTTTGCTCTATGCTGGCGCTCTCAACATTGGGGGAATGAGGCTCATGCCTCACATCAACCT GATATCCGGTAAATTGACTTGGAAATCTTGTCCACTCCGCCAAAATAACCATCTAATCTCTGCTAGGTGTCATCC ACATCGTCGCCTTTGTCGCCATTTGCATTGTTCTTGGAGTCATGGCTCAGAAGAATACGGCGGAATTTGTCTTTA CCGAGTTTGTCAATGGCAGTGGCTGGAATTCAGACGTTATTTCTTGGCTCGTCGGTCTTCTCAGTACCGTATATC CATTCTTGGGGTAAGCCTTGACTTTCTTGCTGGTTACATGACCCCTTTCTAATCACTTTCAATTTTTCCGTCTCT AGCTACGATGCTGCAACTCACTTGGCAGAAGAACTACCCAACGCTAGCCGCAACGTTCCTTTGGCCATGTTGGGC AGTGTCATGGTCAACGGCTTGATGGGCTTTATTTACACCATCCTGCTCTTGTTCTCGGCAGGCTCGCTTGAAAGT CTTGTGAGCACGCCCACCGGATTTCCCTACATGCAAATCTTCCTCGACGCGACGAAATCCCGGGCAGCCGTTACC GTCCTTTCTCTCAATCTCGTCCTCGTTGCCACGGCCGCCACTATTGCTGGAGTCACATCTACCTCTCGTACTCTT TGGGCTTTTGCCCGTGACAAGGCAACCCCATGTCACGAGTATCTGAGTGCTGTAAATCCCTCAGTCCAGCTTCCC GTTCGCGCCGTTCTTGTCGTCCTTGTTTTCCAATTCCTCCTCGGTCTGATTTATATTGGGAACGCGACTGCATTC AACGCCATTTTGTCCATGGCAATCATCGGTCTTTACCTCTCATATACACTGCCCATCTATTACATGTTTTTCTAC GGCCGCCGCAAGCTGAGAAGGGAAGACTATGGCCCCTTCCGCCTCAAGCCCTGGATTGGAAACATCTTCAACGTC GTGGCCATGATTTGGATGTTGATTGCCATGTTCTTTAGCACCTTTCCCACGACATACCCCGTCACAGCGGAGAAT ATGAATTACTGCGTTGTTGTTCTCGCTGGTTGGGGTAGTTTTGGCTTGTTTTACTATCTGTTTGCCGGTAAGAAG AAGTTTCAACTCCCAATTACCGATGTGTCAGTCATTGCTGCAGACGAGCCGGCTTCGGTTGGATTTTCAGAAAAG AATTAA |