Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7527
Gene name
LocationContig_80:47199..48936
Strand-
Gene length (bp)1737
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02913 FAD-oxidase_C FAD linked oxidases, C-terminal domain 2.9E-60 301 549
PF01565 FAD_binding_4 FAD binding domain 1.9E-36 125 259

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 62 551 0.0E+00
sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 67 551 0.0E+00
sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 65 551 0.0E+00
sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 75 551 3.0E-177
sp|B8B7X6|D2HDH_ORYSI Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 75 551 9.0E-173
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Swissprot ID Swissprot Description Start End E-value
sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 62 551 0.0E+00
sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 67 551 0.0E+00
sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 65 551 0.0E+00
sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 75 551 3.0E-177
sp|B8B7X6|D2HDH_ORYSI Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 75 551 9.0E-173
sp|Q7XI14|D2HDH_ORYSJ Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=D2HGDH PE=3 SV=1 75 551 2.0E-172
sp|Q8N465|D2HDH_HUMAN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=D2HGDH PE=1 SV=3 64 551 1.0E-170
sp|A1L258|D2HDH_DANRE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio GN=d2hgdh PE=2 SV=1 81 551 8.0E-170
sp|Q1JPD3|D2HDH_BOVIN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=D2HGDH PE=2 SV=2 29 551 9.0E-168
sp|P84850|D2HDH_RAT D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=D2hgdh PE=3 SV=1 64 551 8.0E-164
sp|Q8CIM3|D2HDH_MOUSE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=D2hgdh PE=1 SV=3 64 551 2.0E-163
sp|P32891|DLD1_YEAST D-lactate dehydrogenase [cytochrome] 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD1 PE=1 SV=2 89 549 1.0E-45
sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 63 551 2.0E-45
sp|P94535|GLCD_BACSU Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 111 549 2.0E-43
sp|P0AEP9|GLCD_ECOLI Glycolate oxidase subunit GlcD OS=Escherichia coli (strain K12) GN=glcD PE=3 SV=1 73 551 6.0E-43
sp|P0AEQ0|GLCD_ECOL6 Glycolate oxidase subunit GlcD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=glcD PE=3 SV=1 73 551 6.0E-43
sp|Q12627|DLD1_KLULA D-lactate dehydrogenase [cytochrome], mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DLD1 PE=3 SV=2 99 549 3.0E-41
sp|P9WIT0|Y2280_MYCTO Uncharacterized FAD-linked oxidoreductase MT2338 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2338 PE=3 SV=1 87 547 4.0E-41
sp|P9WIT1|Y2280_MYCTU Uncharacterized FAD-linked oxidoreductase Rv2280 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2280 PE=1 SV=1 87 547 4.0E-41
sp|Q86WU2|LDHD_HUMAN Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens GN=LDHD PE=1 SV=1 126 551 2.0E-37
sp|Q7TNG8|LDHD_MOUSE Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus GN=Ldhd PE=1 SV=1 84 551 5.0E-37
sp|O29853|DLD_ARCFU D-lactate dehydrogenase (acceptor) OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=dld PE=1 SV=1 121 551 7.0E-36
sp|Q8X7S0|YGCU_ECO57 Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli O157:H7 GN=ygcU PE=3 SV=1 126 546 1.0E-22
sp|Q46911|YGCU_ECOLI Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli (strain K12) GN=ygcU PE=3 SV=4 126 546 3.0E-22
sp|Q57252|Y1163_HAEIN Uncharacterized protein HI_1163 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1163 PE=1 SV=1 119 549 9.0E-18
sp|P77748|YDIJ_ECOLI Uncharacterized protein YdiJ OS=Escherichia coli (strain K12) GN=ydiJ PE=3 SV=1 126 549 4.0E-16
sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1 125 545 5.0E-16
sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1 88 545 6.0E-16
sp|O96759|ADAS_DICDI Alkyldihydroxyacetonephosphate synthase OS=Dictyostelium discoideum GN=eapA PE=1 SV=1 67 551 4.0E-15
sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1 115 294 3.0E-14
sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1 88 545 1.0E-13
sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 88 310 2.0E-13
sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1 73 310 6.0E-12
sp|O97157|ADAS_TRYBB Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei brucei PE=3 SV=1 111 302 5.0E-09
sp|Q90YK3|GGLO_SCYTO L-gulonolactone oxidase OS=Scyliorhinus torazame GN=GULO PE=2 SV=1 113 319 2.0E-06
sp|Q7SGY1|ALO_NEUCR Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alo-1 PE=3 SV=1 101 306 2.0E-06
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GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:1901265 nucleoside phosphate binding No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
AA4 9.0E-19 86 270

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 34 Decorating

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5212
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3247
Ophiocordyceps australis map64 (Brazil) OphauB2|7527 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|04908
Ophiocordyceps camponoti-rufipedis Ophun1|5788
Ophiocordyceps kimflemingae Ophio5|8294
Ophiocordyceps subramaniannii Hirsu2|4148

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7527
MARCSRILGPAPLRALCGTCPCLGDAIRPGIAGWRRSGAACAPRRPRSFVTTAPRLLAGTRPRDAALTAKTYPDI
KRDERFAQLTEEHVKHFETLLGREGIIEAASDVEPFNEDWMHKYRGQSGLVLRPKSTEQVSAIMKYCNEKRLAVV
PQGGNTGLVGGSVPVFDEIVVSLSRLNKIDSFDAVSGSLVLEAGCILEVADQYLAQRGYIFPLDLGAKGSCQVGG
NVATNAGGLRLLRYGSLHGSVLGLEAVLPDGTVMDDMCTLRKNNTGYDVKQLLIGSEGTIGIITKIAIQCPQRSP
AVNVAFLGLESYAKAQRAFCEAKGQLSEILSAFELMDGTSQKLVKSAGQGKPPLEAEYPFYCLIETSGSNADHDY
EKLEKFLQHVMGQDVVMDGVVAQDATQAKALWAWREGIPESIGHWGGVYKYDVSVPLADMYTLVEDVKARVQKAG
LMGEGDSHPVVDVVGYGHMGDSNLHLNVAVRRYDKEVERVLEPYVYEWIEQKKGSISAEHGLGLAKKKYTRYSRS
PSMLGLMRQVKKLFDPNGIMNPYKYI*
Coding >OphauB2|7527
ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC
GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC
ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC
AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA
ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT
GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG
CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG
CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG
GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC
AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG
GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA
CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT
GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG
CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA
AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT
GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG
ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG
TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA
CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT
CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG
CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC
CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTAATGGAATCATGAATCCCTACAAGTAC
ATATAG
Transcript >OphauB2|7527
ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC
GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC
ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC
AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA
ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT
GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG
CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG
CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG
GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC
AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG
GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA
CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT
GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG
CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA
AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT
GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG
ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG
TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA
CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT
CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG
CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC
CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTAATGGAATCATGAATCCCTACAAGTAC
ATATAG
Gene >OphauB2|7527
ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC
GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC
ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC
AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA
ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT
GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG
CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG
CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG
GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC
AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG
GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA
CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT
GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG
CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA
AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT
GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG
ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG
TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA
CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT
CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG
CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC
CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTGTGAGTCGTCCCCGCATTCTCTGTGCT
CACGTGCTTTTGCAGTCGTCGATTGCAGAGGTCGAGGCTGACTGGCAGAGGCAGAATGGAATCATGAATCCCTAC
AAGTACATATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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