Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7527
Gene name
LocationContig_80:47199..48936
Strand-
Gene length (bp)1737
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02913 FAD-oxidase_C FAD linked oxidases, C-terminal domain 2.9E-60 301 549
PF01565 FAD_binding_4 FAD binding domain 1.9E-36 125 259

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 62 551 0.0E+00
sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 67 551 0.0E+00
sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 65 551 0.0E+00
sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 75 551 3.0E-177
sp|B8B7X6|D2HDH_ORYSI Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 75 551 9.0E-173
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Swissprot ID Swissprot Description Start End E-value
sp|Q9C1X2|YN53_SCHPO Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 62 551 0.0E+00
sp|P46681|DLD2_YEAST D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 67 551 0.0E+00
sp|P39976|DLD3_YEAST D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 65 551 0.0E+00
sp|O23240|D2HDH_ARATH D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 75 551 3.0E-177
sp|B8B7X6|D2HDH_ORYSI Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 75 551 9.0E-173
sp|Q7XI14|D2HDH_ORYSJ Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=D2HGDH PE=3 SV=1 75 551 2.0E-172
sp|Q8N465|D2HDH_HUMAN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=D2HGDH PE=1 SV=3 64 551 1.0E-170
sp|A1L258|D2HDH_DANRE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio GN=d2hgdh PE=2 SV=1 81 551 8.0E-170
sp|Q1JPD3|D2HDH_BOVIN D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=D2HGDH PE=2 SV=2 29 551 9.0E-168
sp|P84850|D2HDH_RAT D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=D2hgdh PE=3 SV=1 64 551 8.0E-164
sp|Q8CIM3|D2HDH_MOUSE D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=D2hgdh PE=1 SV=3 64 551 2.0E-163
sp|P32891|DLD1_YEAST D-lactate dehydrogenase [cytochrome] 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD1 PE=1 SV=2 89 549 1.0E-45
sp|Q94AX4|DLD_ARATH D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 63 551 2.0E-45
sp|P94535|GLCD_BACSU Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 111 549 2.0E-43
sp|P0AEP9|GLCD_ECOLI Glycolate oxidase subunit GlcD OS=Escherichia coli (strain K12) GN=glcD PE=3 SV=1 73 551 6.0E-43
sp|P0AEQ0|GLCD_ECOL6 Glycolate oxidase subunit GlcD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=glcD PE=3 SV=1 73 551 6.0E-43
sp|Q12627|DLD1_KLULA D-lactate dehydrogenase [cytochrome], mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DLD1 PE=3 SV=2 99 549 3.0E-41
sp|P9WIT0|Y2280_MYCTO Uncharacterized FAD-linked oxidoreductase MT2338 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2338 PE=3 SV=1 87 547 4.0E-41
sp|P9WIT1|Y2280_MYCTU Uncharacterized FAD-linked oxidoreductase Rv2280 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2280 PE=1 SV=1 87 547 4.0E-41
sp|Q86WU2|LDHD_HUMAN Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens GN=LDHD PE=1 SV=1 126 551 2.0E-37
sp|Q7TNG8|LDHD_MOUSE Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus GN=Ldhd PE=1 SV=1 84 551 5.0E-37
sp|O29853|DLD_ARCFU D-lactate dehydrogenase (acceptor) OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=dld PE=1 SV=1 121 551 7.0E-36
sp|Q8X7S0|YGCU_ECO57 Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli O157:H7 GN=ygcU PE=3 SV=1 126 546 1.0E-22
sp|Q46911|YGCU_ECOLI Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli (strain K12) GN=ygcU PE=3 SV=4 126 546 3.0E-22
sp|Q57252|Y1163_HAEIN Uncharacterized protein HI_1163 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1163 PE=1 SV=1 119 549 9.0E-18
sp|P77748|YDIJ_ECOLI Uncharacterized protein YdiJ OS=Escherichia coli (strain K12) GN=ydiJ PE=3 SV=1 126 549 4.0E-16
sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1 125 545 5.0E-16
sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1 88 545 6.0E-16
sp|O96759|ADAS_DICDI Alkyldihydroxyacetonephosphate synthase OS=Dictyostelium discoideum GN=eapA PE=1 SV=1 67 551 4.0E-15
sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1 115 294 3.0E-14
sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1 88 545 1.0E-13
sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 88 310 2.0E-13
sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1 73 310 6.0E-12
sp|O97157|ADAS_TRYBB Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei brucei PE=3 SV=1 111 302 5.0E-09
sp|Q90YK3|GGLO_SCYTO L-gulonolactone oxidase OS=Scyliorhinus torazame GN=GULO PE=2 SV=1 113 319 2.0E-06
sp|Q7SGY1|ALO_NEUCR Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alo-1 PE=3 SV=1 101 306 2.0E-06
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GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:1901265 nucleoside phosphate binding No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7527
MARCSRILGPAPLRALCGTCPCLGDAIRPGIAGWRRSGAACAPRRPRSFVTTAPRLLAGTRPRDAALTAKTYPDI
KRDERFAQLTEEHVKHFETLLGREGIIEAASDVEPFNEDWMHKYRGQSGLVLRPKSTEQVSAIMKYCNEKRLAVV
PQGGNTGLVGGSVPVFDEIVVSLSRLNKIDSFDAVSGSLVLEAGCILEVADQYLAQRGYIFPLDLGAKGSCQVGG
NVATNAGGLRLLRYGSLHGSVLGLEAVLPDGTVMDDMCTLRKNNTGYDVKQLLIGSEGTIGIITKIAIQCPQRSP
AVNVAFLGLESYAKAQRAFCEAKGQLSEILSAFELMDGTSQKLVKSAGQGKPPLEAEYPFYCLIETSGSNADHDY
EKLEKFLQHVMGQDVVMDGVVAQDATQAKALWAWREGIPESIGHWGGVYKYDVSVPLADMYTLVEDVKARVQKAG
LMGEGDSHPVVDVVGYGHMGDSNLHLNVAVRRYDKEVERVLEPYVYEWIEQKKGSISAEHGLGLAKKKYTRYSRS
PSMLGLMRQVKKLFDPNGIMNPYKYI*
Coding >OphauB2|7527
ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC
GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC
ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC
AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA
ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT
GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG
CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG
CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG
GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC
AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG
GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA
CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT
GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG
CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA
AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT
GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG
ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG
TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA
CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT
CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG
CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC
CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTAATGGAATCATGAATCCCTACAAGTAC
ATATAG
Transcript >OphauB2|7527
ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC
GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC
ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC
AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA
ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT
GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG
CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG
CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG
GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC
AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG
GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA
CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT
GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG
CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA
AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT
GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG
ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG
TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA
CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT
CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG
CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC
CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTAATGGAATCATGAATCCCTACAAGTAC
ATATAG
Gene >OphauB2|7527
ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC
GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC
ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC
AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA
ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT
GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG
CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG
CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG
GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC
AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG
GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA
CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT
GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG
CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA
AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT
GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG
ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG
TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA
CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT
CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG
CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC
CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTGTGAGTCGTCCCCGCATTCTCTGTGCT
CACGTGCTTTTGCAGTCGTCGATTGCAGAGGTCGAGGCTGACTGGCAGAGGCAGAATGGAATCATGAATCCCTAC
AAGTACATATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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