Protein ID | OphauB2|7527 |
Gene name | |
Location | Contig_80:47199..48936 |
Strand | - |
Gene length (bp) | 1737 |
Transcript length (bp) | 1656 |
Coding sequence length (bp) | 1656 |
Protein length (aa) | 552 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02913 | FAD-oxidase_C | FAD linked oxidases, C-terminal domain | 2.9E-60 | 301 | 549 |
PF01565 | FAD_binding_4 | FAD binding domain | 1.9E-36 | 125 | 259 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9C1X2|YN53_SCHPO | Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 | 62 | 551 | 0.0E+00 |
sp|P46681|DLD2_YEAST | D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 | 67 | 551 | 0.0E+00 |
sp|P39976|DLD3_YEAST | D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 | 65 | 551 | 0.0E+00 |
sp|O23240|D2HDH_ARATH | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 | 75 | 551 | 3.0E-177 |
sp|B8B7X6|D2HDH_ORYSI | Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 | 75 | 551 | 9.0E-173 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9C1X2|YN53_SCHPO | Putative D-lactate dehydrogenase C713.03, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.03 PE=3 SV=1 | 62 | 551 | 0.0E+00 |
sp|P46681|DLD2_YEAST | D-lactate dehydrogenase [cytochrome] 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD2 PE=1 SV=1 | 67 | 551 | 0.0E+00 |
sp|P39976|DLD3_YEAST | D-lactate dehydrogenase [cytochrome] 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD3 PE=1 SV=1 | 65 | 551 | 0.0E+00 |
sp|O23240|D2HDH_ARATH | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=D2HGDH PE=1 SV=3 | 75 | 551 | 3.0E-177 |
sp|B8B7X6|D2HDH_ORYSI | Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. indica GN=D2HGDH PE=3 SV=1 | 75 | 551 | 9.0E-173 |
sp|Q7XI14|D2HDH_ORYSJ | Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=D2HGDH PE=3 SV=1 | 75 | 551 | 2.0E-172 |
sp|Q8N465|D2HDH_HUMAN | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=D2HGDH PE=1 SV=3 | 64 | 551 | 1.0E-170 |
sp|A1L258|D2HDH_DANRE | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Danio rerio GN=d2hgdh PE=2 SV=1 | 81 | 551 | 8.0E-170 |
sp|Q1JPD3|D2HDH_BOVIN | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Bos taurus GN=D2HGDH PE=2 SV=2 | 29 | 551 | 9.0E-168 |
sp|P84850|D2HDH_RAT | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=D2hgdh PE=3 SV=1 | 64 | 551 | 8.0E-164 |
sp|Q8CIM3|D2HDH_MOUSE | D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=D2hgdh PE=1 SV=3 | 64 | 551 | 2.0E-163 |
sp|P32891|DLD1_YEAST | D-lactate dehydrogenase [cytochrome] 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DLD1 PE=1 SV=2 | 89 | 549 | 1.0E-45 |
sp|Q94AX4|DLD_ARATH | D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 | 63 | 551 | 2.0E-45 |
sp|P94535|GLCD_BACSU | Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) GN=glcD PE=3 SV=1 | 111 | 549 | 2.0E-43 |
sp|P0AEP9|GLCD_ECOLI | Glycolate oxidase subunit GlcD OS=Escherichia coli (strain K12) GN=glcD PE=3 SV=1 | 73 | 551 | 6.0E-43 |
sp|P0AEQ0|GLCD_ECOL6 | Glycolate oxidase subunit GlcD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=glcD PE=3 SV=1 | 73 | 551 | 6.0E-43 |
sp|Q12627|DLD1_KLULA | D-lactate dehydrogenase [cytochrome], mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DLD1 PE=3 SV=2 | 99 | 549 | 3.0E-41 |
sp|P9WIT0|Y2280_MYCTO | Uncharacterized FAD-linked oxidoreductase MT2338 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2338 PE=3 SV=1 | 87 | 547 | 4.0E-41 |
sp|P9WIT1|Y2280_MYCTU | Uncharacterized FAD-linked oxidoreductase Rv2280 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2280 PE=1 SV=1 | 87 | 547 | 4.0E-41 |
sp|Q86WU2|LDHD_HUMAN | Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens GN=LDHD PE=1 SV=1 | 126 | 551 | 2.0E-37 |
sp|Q7TNG8|LDHD_MOUSE | Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus GN=Ldhd PE=1 SV=1 | 84 | 551 | 5.0E-37 |
sp|O29853|DLD_ARCFU | D-lactate dehydrogenase (acceptor) OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=dld PE=1 SV=1 | 121 | 551 | 7.0E-36 |
sp|Q8X7S0|YGCU_ECO57 | Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli O157:H7 GN=ygcU PE=3 SV=1 | 126 | 546 | 1.0E-22 |
sp|Q46911|YGCU_ECOLI | Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli (strain K12) GN=ygcU PE=3 SV=4 | 126 | 546 | 3.0E-22 |
sp|Q57252|Y1163_HAEIN | Uncharacterized protein HI_1163 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1163 PE=1 SV=1 | 119 | 549 | 9.0E-18 |
sp|P77748|YDIJ_ECOLI | Uncharacterized protein YdiJ OS=Escherichia coli (strain K12) GN=ydiJ PE=3 SV=1 | 126 | 549 | 4.0E-16 |
sp|O45218|ADAS_CAEEL | Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1 | 125 | 545 | 5.0E-16 |
sp|P97275|ADAS_CAVPO | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1 | 88 | 545 | 6.0E-16 |
sp|O96759|ADAS_DICDI | Alkyldihydroxyacetonephosphate synthase OS=Dictyostelium discoideum GN=eapA PE=1 SV=1 | 67 | 551 | 4.0E-15 |
sp|Q9V778|ADAS_DROME | Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1 | 115 | 294 | 3.0E-14 |
sp|Q8C0I1|ADAS_MOUSE | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1 | 88 | 545 | 1.0E-13 |
sp|O00116|ADAS_HUMAN | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 | 88 | 310 | 2.0E-13 |
sp|Q9EQR2|ADAS_RAT | Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1 | 73 | 310 | 6.0E-12 |
sp|O97157|ADAS_TRYBB | Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei brucei PE=3 SV=1 | 111 | 302 | 5.0E-09 |
sp|Q90YK3|GGLO_SCYTO | L-gulonolactone oxidase OS=Scyliorhinus torazame GN=GULO PE=2 SV=1 | 113 | 319 | 2.0E-06 |
sp|Q7SGY1|ALO_NEUCR | Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alo-1 PE=3 SV=1 | 101 | 306 | 2.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0050660 | flavin adenine dinucleotide binding | Yes |
GO:0016491 | oxidoreductase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:0036094 | small molecule binding | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0043167 | ion binding | No |
GO:0000166 | nucleotide binding | No |
CAZyme category | E-value | Start | End |
---|---|---|---|
AA4 | 9.0E-19 | 86 | 270 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 34 | Decorating |
Orthofinder run ID | 4 |
Orthogroup | 5212 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|7527 MARCSRILGPAPLRALCGTCPCLGDAIRPGIAGWRRSGAACAPRRPRSFVTTAPRLLAGTRPRDAALTAKTYPDI KRDERFAQLTEEHVKHFETLLGREGIIEAASDVEPFNEDWMHKYRGQSGLVLRPKSTEQVSAIMKYCNEKRLAVV PQGGNTGLVGGSVPVFDEIVVSLSRLNKIDSFDAVSGSLVLEAGCILEVADQYLAQRGYIFPLDLGAKGSCQVGG NVATNAGGLRLLRYGSLHGSVLGLEAVLPDGTVMDDMCTLRKNNTGYDVKQLLIGSEGTIGIITKIAIQCPQRSP AVNVAFLGLESYAKAQRAFCEAKGQLSEILSAFELMDGTSQKLVKSAGQGKPPLEAEYPFYCLIETSGSNADHDY EKLEKFLQHVMGQDVVMDGVVAQDATQAKALWAWREGIPESIGHWGGVYKYDVSVPLADMYTLVEDVKARVQKAG LMGEGDSHPVVDVVGYGHMGDSNLHLNVAVRRYDKEVERVLEPYVYEWIEQKKGSISAEHGLGLAKKKYTRYSRS PSMLGLMRQVKKLFDPNGIMNPYKYI* |
Coding | >OphauB2|7527 ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTAATGGAATCATGAATCCCTACAAGTAC ATATAG |
Transcript | >OphauB2|7527 ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTAATGGAATCATGAATCCCTACAAGTAC ATATAG |
Gene | >OphauB2|7527 ATGGCACGCTGCTCAAGGATACTTGGCCCAGCTCCGCTTCGGGCCCTTTGCGGCACTTGTCCATGCCTAGGCGAC GCCATCAGACCTGGCATTGCCGGCTGGCGCCGCTCAGGCGCGGCATGTGCTCCTCGACGGCCACGCAGCTTTGTC ACGACTGCGCCGAGATTGTTGGCCGGGACGCGGCCTCGTGATGCTGCCCTGACGGCCAAAACATATCCAGATATC AAACGAGACGAGCGGTTTGCTCAGCTGACAGAGGAGCACGTGAAGCACTTTGAGACGCTGCTTGGCCGTGAAGGA ATCATTGAGGCGGCTTCTGATGTCGAGCCCTTCAACGAGGACTGGATGCACAAGTACCGTGGCCAGTCTGGCCTT GTCCTGCGCCCCAAGTCGACGGAACAGGTCAGCGCCATTATGAAGTACTGCAACGAGAAGCGGCTGGCTGTTGTG CCCCAGGGCGGAAACACGGGGCTGGTTGGTGGATCGGTCCCAGTCTTTGACGAGATTGTCGTGAGTCTGAGCCGG CTCAACAAGATTGACTCGTTTGATGCTGTTAGCGGATCTCTGGTGCTTGAGGCGGGCTGTATACTCGAAGTGGCG GACCAGTATCTGGCGCAGCGTGGTTACATCTTCCCCTTGGATCTGGGAGCCAAAGGGTCATGCCAGGTGGGAGGC AATGTAGCCACAAATGCTGGCGGCCTGCGTCTTTTGCGCTACGGTAGTCTCCATGGCAGTGTCCTCGGACTGGAG GCTGTGCTGCCAGACGGCACTGTCATGGATGATATGTGCACGCTGCGCAAGAACAATACGGGCTACGACGTCAAA CAGCTCTTGATAGGCTCTGAAGGCACCATTGGTATAATCACCAAGATTGCCATTCAATGCCCGCAGCGGTCGCCT GCCGTCAACGTAGCCTTTTTGGGGCTCGAGTCTTATGCAAAGGCCCAACGGGCGTTTTGCGAGGCCAAGGGCCAG CTATCCGAGATTCTGTCGGCCTTTGAGCTCATGGACGGCACTAGCCAAAAGCTGGTGAAGAGTGCCGGACAGGGA AAACCCCCCCTGGAGGCAGAGTATCCATTCTACTGCCTGATTGAAACGAGCGGGTCCAACGCTGACCACGACTAT GAGAAGCTGGAGAAATTTCTTCAACATGTCATGGGCCAGGACGTGGTGATGGATGGCGTGGTTGCCCAAGACGCG ACGCAGGCAAAAGCACTATGGGCGTGGCGCGAGGGTATCCCCGAGAGCATTGGCCACTGGGGCGGCGTCTACAAG TACGACGTGTCGGTACCTCTAGCTGACATGTACACTCTGGTTGAGGATGTCAAGGCCCGCGTGCAAAAGGCTGGA CTCATGGGCGAGGGTGACAGTCACCCCGTTGTGGACGTGGTTGGCTATGGCCACATGGGCGACTCGAATCTGCAT CTCAATGTTGCAGTGCGGCGCTACGACAAGGAGGTCGAGAGGGTACTCGAGCCCTACGTATACGAATGGATCGAG CAGAAAAAGGGCAGCATAAGTGCCGAACACGGACTTGGACTCGCCAAGAAGAAGTATACCAGGTATAGCCGAAGC CCCAGCATGCTGGGCCTCATGCGACAAGTCAAGAAGCTTTTTGACCCTGTGAGTCGTCCCCGCATTCTCTGTGCT CACGTGCTTTTGCAGTCGTCGATTGCAGAGGTCGAGGCTGACTGGCAGAGGCAGAATGGAATCATGAATCCCTAC AAGTACATATAG |