Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|7470
Gene name
Location	Contig_8:197174..197865
Strand	+
Gene length (bp)	691
Transcript length (bp)	600
Coding sequence length (bp)	600
Protein length (aa)	200

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O74903\|YCS3_SCHPO	Uncharacterized calcium-binding protein C613.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC613.03 PE=3 SV=1	31	198	4.0E-30
sp\|P39931\|SS120_YEAST	Protein SSP120 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSP120 PE=1 SV=1	33	162	9.0E-22

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 18	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|7470 MHQSLLSILALAGTCRAHGDHAQKPMVNSNADWMTKHMAEEHHLTSWDAESFFTLHDFNNDGLWKPDELQRTYGL KDPSNKDMSAERRDQVTRQLLQLLDLDGDGAVSRSEWLSFIAQGRTLPDLGTGPGHHGDDEYEYEIHHWEKYHDE NTKLEDLTHPEDIEHFKMHESLEKAAEELEALEKRPIVEENIPAKFRRS*
Coding	>OphauB2\|7470 ATGCATCAAAGTCTACTCTCCATTCTCGCTCTTGCAGGCACTTGCCGCGCCCATGGCGACCATGCCCAGAAGCCA ATGGTGAATAGCAATGCCGACTGGATGACCAAGCACATGGCCGAGGAGCACCACTTGACGAGCTGGGATGCCGAA TCCTTCTTTACCCTGCACGACTTCAACAACGACGGCCTCTGGAAGCCGGATGAGTTGCAGCGAACGTATGGTCTC AAGGACCCGTCAAACAAGGACATGTCAGCCGAGCGTCGCGACCAAGTGACGCGCCAACTGCTACAACTGCTGGAC CTCGATGGCGATGGCGCTGTCAGCCGCTCAGAATGGCTGTCCTTTATTGCTCAGGGTCGCACGCTGCCCGACTTG GGCACTGGGCCGGGCCATCACGGCGACGATGAGTACGAGTACGAGATTCACCATTGGGAAAAGTACCACGACGAA AACACAAAGCTCGAGGACCTGACACATCCCGAGGATATTGAGCACTTCAAGATGCACGAGAGCCTCGAGAAGGCG GCAGAGGAGCTTGAGGCGCTGGAGAAGCGGCCTATTGTCGAAGAGAACATCCCAGCCAAGTTTCGCCGCTCGTGA
Transcript	>OphauB2\|7470 ATGCATCAAAGTCTACTCTCCATTCTCGCTCTTGCAGGCACTTGCCGCGCCCATGGCGACCATGCCCAGAAGCCA ATGGTGAATAGCAATGCCGACTGGATGACCAAGCACATGGCCGAGGAGCACCACTTGACGAGCTGGGATGCCGAA TCCTTCTTTACCCTGCACGACTTCAACAACGACGGCCTCTGGAAGCCGGATGAGTTGCAGCGAACGTATGGTCTC AAGGACCCGTCAAACAAGGACATGTCAGCCGAGCGTCGCGACCAAGTGACGCGCCAACTGCTACAACTGCTGGAC CTCGATGGCGATGGCGCTGTCAGCCGCTCAGAATGGCTGTCCTTTATTGCTCAGGGTCGCACGCTGCCCGACTTG GGCACTGGGCCGGGCCATCACGGCGACGATGAGTACGAGTACGAGATTCACCATTGGGAAAAGTACCACGACGAA AACACAAAGCTCGAGGACCTGACACATCCCGAGGATATTGAGCACTTCAAGATGCACGAGAGCCTCGAGAAGGCG GCAGAGGAGCTTGAGGCGCTGGAGAAGCGGCCTATTGTCGAAGAGAACATCCCAGCCAAGTTTCGCCGCTCGTGA
Gene	>OphauB2\|7470 ATGCATCAAAGTCTACTCTCCATTCTCGCTCTTGCAGGCACTTGCCGCGCCCATGGCGACCATGCCCAGAAGCCA ATGGTGAATAGCAATGCCGACTGGATGACCAAGCACATGGCCGGCACGTTTGTCCCTGTGCCCCCTTTTGACGTC GTGCCCAACATGGTGCTGTGCCGACTCAAAGAGGTGCTGCTAACCAGGCTTCACTACAGAGGAGCACCACTTGAC GAGCTGGGATGCCGAATCCTTCTTTACCCTGCACGACTTCAACAACGACGGCCTCTGGAAGCCGGATGAGTTGCA GCGAACGTATGGTCTCAAGGACCCGTCAAACAAGGACATGTCAGCCGAGCGTCGCGACCAAGTGACGCGCCAACT GCTACAACTGCTGGACCTCGATGGCGATGGCGCTGTCAGCCGCTCAGAATGGCTGTCCTTTATTGCTCAGGGTCG CACGCTGCCCGACTTGGGCACTGGGCCGGGCCATCACGGCGACGATGAGTACGAGTACGAGATTCACCATTGGGA AAAGTACCACGACGAAAACACAAAGCTCGAGGACCTGACACATCCCGAGGATATTGAGCACTTCAAGATGCACGA GAGCCTCGAGAAGGCGGCAGAGGAGCTTGAGGCGCTGGAGAAGCGGCCTATTGTCGAAGAGAACATCCCAGCCAA GTTTCGCCGCTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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