© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7404 |
| Gene name | |
| Location | Contig_8:29890..31357 |
| Strand | - |
| Gene length (bp) | 1467 |
| Transcript length (bp) | 1350 |
| Coding sequence length (bp) | 1350 |
| Protein length (aa) | 450 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.8E-35 | 86 | 401 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 64 | 422 | 3.0E-58 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 64 | 422 | 2.0E-53 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 64 | 417 | 3.0E-50 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 87 | 408 | 5.0E-17 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 50 | 408 | 2.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 64 | 422 | 3.0E-58 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 64 | 422 | 2.0E-53 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 64 | 417 | 3.0E-50 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 87 | 408 | 5.0E-17 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 50 | 408 | 2.0E-13 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 74 | 440 | 2.0E-12 |
| sp|Q5SR56|HIAL1_HUMAN | Hippocampus abundant transcript-like protein 1 OS=Homo sapiens GN=HIATL1 PE=2 SV=3 | 78 | 409 | 3.0E-11 |
| sp|A4IF94|HIAL1_BOVIN | Hippocampus abundant transcript-like protein 1 OS=Bos taurus GN=HIATL1 PE=2 SV=1 | 84 | 409 | 3.0E-10 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 87 | 418 | 3.0E-10 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 50 | 408 | 3.0E-10 |
| sp|Q07282|TCR5_ECOLX | Tetracycline resistance protein, class E OS=Escherichia coli GN=tetA PE=3 SV=1 | 87 | 449 | 6.0E-10 |
| sp|Q8CIA9|HIAL1_MOUSE | Hippocampus abundant transcript-like protein 1 OS=Mus musculus GN=Hiatl1 PE=2 SV=3 | 84 | 409 | 1.0E-09 |
| sp|P70187|HIAT1_MOUSE | Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1 PE=2 SV=3 | 84 | 409 | 7.0E-09 |
| sp|Q96MC6|HIAT1_HUMAN | Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=HIAT1 PE=2 SV=2 | 84 | 409 | 8.0E-09 |
| sp|P39843|BMR2_BACSU | Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168) GN=blt PE=3 SV=1 | 86 | 348 | 3.0E-08 |
| sp|Q6GBD5|NORA_STAAS | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 | 81 | 220 | 4.0E-08 |
| sp|P0A0J6|NORA_STAAW | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 | 81 | 220 | 4.0E-08 |
| sp|P0A0J7|NORA_STAAU | Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 | 81 | 220 | 4.0E-08 |
| sp|P0A0J5|NORA_STAAN | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 | 81 | 220 | 4.0E-08 |
| sp|P0A0J4|NORA_STAAM | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 | 81 | 220 | 4.0E-08 |
| sp|B2RYH9|HIAL1_RAT | Hippocampus abundant transcript-like protein 1 OS=Rattus norvegicus GN=Hiatl1 PE=2 SV=1 | 84 | 409 | 5.0E-08 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 81 | 220 | 5.0E-08 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 81 | 211 | 9.0E-08 |
| sp|P33733|TCR4_SALOR | Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 | 9 | 408 | 4.0E-07 |
| sp|Q0VA82|MFSD8_DANRE | Major facilitator superfamily domain-containing protein 8 OS=Danio rerio GN=mfsd8 PE=2 SV=1 | 72 | 309 | 8.0E-07 |
| sp|Q8NBP5|MFSD9_HUMAN | Major facilitator superfamily domain-containing protein 9 OS=Homo sapiens GN=MFSD9 PE=2 SV=2 | 87 | 263 | 7.0E-06 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 78 | 414 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 82 | 104 | 22 |
| 3 | 116 | 135 | 19 |
| 4 | 173 | 195 | 22 |
| 5 | 202 | 224 | 22 |
| 6 | 265 | 287 | 22 |
| 7 | 300 | 319 | 19 |
| 8 | 325 | 343 | 18 |
| 9 | 350 | 372 | 22 |
| 10 | 415 | 437 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7404 MAAVDAATRKRVLRVIVISLLLDLISFTFILPLFPKLLEFYRDHEALARLDTAPPTLLQRVLAGLNRYKAAFSRP IDSRHDIVLLGGAMGSLFSLLQAIASPVIGRLSDAYGRRVALLVSMLGNIMSVLLWVVAIDFRTFVASRVVGGLS EGNIQIATAIASDISDEASRGSTMAVIGACFCVAFTFGPALGAWLSSISMVAANPFAAAAGFSLTLIVVETIYLY LRLPETLPSITGAGRPKYKLNKANTSSNRVKTVDRANSQLLLCTVNFLFLFFFSGMESSLSFMTYDLFSFTSASN GRLLGFIGLVASILQGGITRRLAPLFSVRLGVAACLVSFLLLGRINTVGGLYAAATCLAVTSATVVTGLNALGSL DAPDSEHGSELGVLRSWGQLGRGLGPIFFTTIYWWAGRQYAYGVGAAGVSIVALAVMLGLKAPKAPITETRKKQ* |
| Coding | >OphauB2|7404 ATGGCTGCCGTTGACGCTGCTACGAGGAAACGCGTCCTTCGCGTCATTGTTATTTCTCTCCTACTTGATCTGATT TCCTTCACCTTTATCCTTCCCCTATTCCCCAAGCTGCTCGAGTTTTACCGGGATCATGAGGCACTCGCACGGCTC GACACAGCCCCTCCAACTCTACTCCAGCGCGTGCTTGCCGGCCTGAACCGCTACAAGGCGGCTTTTTCGCGCCCA ATCGATTCGCGCCATGACATTGTTCTCCTTGGTGGAGCCATGGGCTCGCTCTTCTCTCTTCTTCAAGCCATCGCC TCGCCCGTCATCGGCCGTCTCTCGGATGCATATGGTCGCCGCGTTGCTCTTCTCGTCTCCATGCTGGGCAACATC ATGTCGGTGCTGCTATGGGTGGTGGCCATTGACTTCCGTACCTTTGTTGCCAGCCGAGTCGTGGGTGGCCTCTCA GAGGGGAACATACAGATTGCGACAGCCATTGCCAGTGACATTTCGGACGAGGCCTCTCGCGGCTCTACAATGGCC GTCATCGGCGCCTGTTTCTGCGTTGCCTTTACCTTTGGCCCTGCTCTTGGTGCCTGGCTGAGTAGCATCTCCATG GTGGCTGCCAACCCTTTTGCTGCAGCTGCCGGCTTCAGCTTGACTCTCATCGTCGTCGAGACCATCTATCTATAC CTTCGGCTCCCTGAGACTTTGCCATCTATTACAGGCGCCGGCCGCCCCAAATACAAACTGAACAAGGCAAACACC AGCTCCAACCGAGTCAAAACAGTAGACCGAGCAAACTCTCAACTCCTGCTTTGTACTGTCAACTTTTTGTTCCTC TTCTTCTTCTCAGGCATGGAGAGCTCGCTTTCCTTCATGACATACGACTTATTCAGCTTTACTTCTGCTAGCAAC GGAAGGCTTTTGGGCTTCATTGGCCTGGTGGCATCCATTCTCCAGGGCGGCATCACCCGTAGGCTGGCTCCTCTG TTTTCAGTCCGCCTTGGGGTAGCAGCATGCCTGGTCTCTTTTCTTCTGCTTGGCCGCATCAATACCGTGGGCGGA CTGTATGCGGCTGCAACGTGCCTAGCCGTCACGTCGGCTACAGTGGTTACTGGTCTCAATGCTCTTGGCAGCCTC GACGCACCCGACAGTGAGCACGGCAGCGAATTGGGAGTCTTGCGAAGCTGGGGCCAGCTGGGGCGAGGACTCGGA CCCATATTCTTCACCACCATCTACTGGTGGGCCGGCCGCCAATATGCCTACGGCGTGGGAGCAGCTGGAGTGTCA ATAGTGGCCTTGGCAGTGATGCTGGGGCTCAAAGCCCCAAAAGCACCCATTACGGAGACAAGGAAGAAGCAATGA |
| Transcript | >OphauB2|7404 ATGGCTGCCGTTGACGCTGCTACGAGGAAACGCGTCCTTCGCGTCATTGTTATTTCTCTCCTACTTGATCTGATT TCCTTCACCTTTATCCTTCCCCTATTCCCCAAGCTGCTCGAGTTTTACCGGGATCATGAGGCACTCGCACGGCTC GACACAGCCCCTCCAACTCTACTCCAGCGCGTGCTTGCCGGCCTGAACCGCTACAAGGCGGCTTTTTCGCGCCCA ATCGATTCGCGCCATGACATTGTTCTCCTTGGTGGAGCCATGGGCTCGCTCTTCTCTCTTCTTCAAGCCATCGCC TCGCCCGTCATCGGCCGTCTCTCGGATGCATATGGTCGCCGCGTTGCTCTTCTCGTCTCCATGCTGGGCAACATC ATGTCGGTGCTGCTATGGGTGGTGGCCATTGACTTCCGTACCTTTGTTGCCAGCCGAGTCGTGGGTGGCCTCTCA GAGGGGAACATACAGATTGCGACAGCCATTGCCAGTGACATTTCGGACGAGGCCTCTCGCGGCTCTACAATGGCC GTCATCGGCGCCTGTTTCTGCGTTGCCTTTACCTTTGGCCCTGCTCTTGGTGCCTGGCTGAGTAGCATCTCCATG GTGGCTGCCAACCCTTTTGCTGCAGCTGCCGGCTTCAGCTTGACTCTCATCGTCGTCGAGACCATCTATCTATAC CTTCGGCTCCCTGAGACTTTGCCATCTATTACAGGCGCCGGCCGCCCCAAATACAAACTGAACAAGGCAAACACC AGCTCCAACCGAGTCAAAACAGTAGACCGAGCAAACTCTCAACTCCTGCTTTGTACTGTCAACTTTTTGTTCCTC TTCTTCTTCTCAGGCATGGAGAGCTCGCTTTCCTTCATGACATACGACTTATTCAGCTTTACTTCTGCTAGCAAC GGAAGGCTTTTGGGCTTCATTGGCCTGGTGGCATCCATTCTCCAGGGCGGCATCACCCGTAGGCTGGCTCCTCTG TTTTCAGTCCGCCTTGGGGTAGCAGCATGCCTGGTCTCTTTTCTTCTGCTTGGCCGCATCAATACCGTGGGCGGA CTGTATGCGGCTGCAACGTGCCTAGCCGTCACGTCGGCTACAGTGGTTACTGGTCTCAATGCTCTTGGCAGCCTC GACGCACCCGACAGTGAGCACGGCAGCGAATTGGGAGTCTTGCGAAGCTGGGGCCAGCTGGGGCGAGGACTCGGA CCCATATTCTTCACCACCATCTACTGGTGGGCCGGCCGCCAATATGCCTACGGCGTGGGAGCAGCTGGAGTGTCA ATAGTGGCCTTGGCAGTGATGCTGGGGCTCAAAGCCCCAAAAGCACCCATTACGGAGACAAGGAAGAAGCAATGA |
| Gene | >OphauB2|7404 ATGGCTGCCGTTGACGCTGCTACGAGGAAACGCGTCCTTCGCGTCATTGTTATTTCTCTCCTACTTGATCTGGTA GCTCCATCCTGTCGCATTGCCCCTTGAATGTCGTCTTCAGTGACTGACGGCAGTCTCTAGATTTCCTTCACCTTT ATCCTTCCCCTATTCCCCAAGCTGCTCGAGTTTTACCGGGATCATGAGGCACTCGCACGGCTCGACACAGCCCCT CCAACTCTACTCCAGCGCGTGCTTGCCGGCCTGAACCGCTACAAGGCGGCTTTTTCGCGCCCAATCGATTCGCGC CATGACATTGTTCTCCTTGGTGGAGCCATGGGCTCGCTCTTCTCGTGCGTTGTTGCCCACAAACCAAACGCTTCG CTTCGCGCTTCTAACCCACGCAGTCTTCTTCAAGCCATCGCCTCGCCCGTCATCGGCCGTCTCTCGGATGCATAT GGTCGCCGCGTTGCTCTTCTCGTCTCCATGCTGGGCAACATCATGTCGGTGCTGCTATGGGTGGTGGCCATTGAC TTCCGTACCTTTGTTGCCAGCCGAGTCGTGGGTGGCCTCTCAGAGGGGAACATACAGATTGCGACAGCCATTGCC AGTGACATTTCGGACGAGGCCTCTCGCGGCTCTACAATGGCCGTCATCGGCGCCTGTTTCTGCGTTGCCTTTACC TTTGGCCCTGCTCTTGGTGCCTGGCTGAGTAGCATCTCCATGGTGGCTGCCAACCCTTTTGCTGCAGCTGCCGGC TTCAGCTTGACTCTCATCGTCGTCGAGACCATCTATCTATACCTTCGGCTCCCTGAGACTTTGCCATCTATTACA GGCGCCGGCCGCCCCAAATACAAACTGAACAAGGCAAACACCAGCTCCAACCGAGTCAAAACAGTAGACCGAGCA AACTCTCAACTCCTGCTTTGTACTGTCAACTTTTTGTTCCTCTTCTTCTTCTCAGGCATGGAGAGCTCGCTTTCC TTCATGACATACGACTTATTCAGCTTTACTTCTGCTAGCAACGGAAGGCTTTTGGGCTTCATTGGCCTGGTGGCA TCCATTCTCCAGGGCGGCATCACCCGTAGGCTGGCTCCTCTGTTTTCAGTCCGCCTTGGGGTAGCAGCATGCCTG GTCTCTTTTCTTCTGCTTGGCCGCATCAATACCGTGGGCGGACTGTATGCGGCTGCAACGTGCCTAGCCGTCACG TCGGCTACAGTGGTTACTGGTCTCAATGCTCTTGGCAGCCTCGACGCACCCGACAGTGAGCACGGCAGCGAATTG GGAGTCTTGCGAAGCTGGGGCCAGCTGGGGCGAGGACTCGGACCCATATTCTTCACCACCATCTACTGGTGGGCC GGCCGCCAATATGCCTACGGCGTGGGAGCAGCTGGAGTGTCAATAGTGGCCTTGGCAGTGATGCTGGGGCTCAAA GCCCCAAAAGCACCCATTACGGAGACAAGGAAGAAGCAATGA |