Protein ID | OphauB2|727 |
Gene name | |
Location | Contig_114:36755..38860 |
Strand | - |
Gene length (bp) | 2105 |
Transcript length (bp) | 1785 |
Coding sequence length (bp) | 1785 |
Protein length (aa) | 595 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 2.3E-05 | 129 | 270 |
PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 1.5E-17 | 441 | 583 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 428 | 593 | 1.0E-32 |
sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 440 | 592 | 4.0E-27 |
sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 441 | 591 | 2.0E-24 |
sp|Q6YXZ1|CAX4_ORYSJ | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 | 419 | 588 | 8.0E-22 |
sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 440 | 593 | 4.0E-21 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 428 | 593 | 1.0E-32 |
sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 440 | 592 | 4.0E-27 |
sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 441 | 591 | 2.0E-24 |
sp|Q6YXZ1|CAX4_ORYSJ | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 | 419 | 588 | 8.0E-22 |
sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 440 | 593 | 4.0E-21 |
sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 96 | 284 | 7.0E-21 |
sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 440 | 583 | 1.0E-20 |
sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 440 | 593 | 1.0E-20 |
sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 440 | 583 | 3.0E-20 |
sp|Q9LFZ8|CAX6_ARATH | Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 | 440 | 593 | 4.0E-20 |
sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 74 | 299 | 1.0E-19 |
sp|Q9LFZ8|CAX6_ARATH | Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 | 92 | 290 | 2.0E-19 |
sp|Q945S5|CAX4_ARATH | Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 | 425 | 584 | 4.0E-19 |
sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 92 | 279 | 2.0E-18 |
sp|Q769E5|CAX1A_ORYSJ | Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 | 401 | 584 | 4.0E-18 |
sp|P74072|CAX_SYNY3 | Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 | 455 | 591 | 7.0E-18 |
sp|Q93Z81|CAX3_ARATH | Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 | 448 | 583 | 2.0E-17 |
sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 99 | 299 | 2.0E-16 |
sp|Q39253|CAX1_ARATH | Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 | 425 | 585 | 3.0E-16 |
sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 99 | 273 | 5.0E-16 |
sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 111 | 298 | 1.0E-15 |
sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 99 | 272 | 2.0E-15 |
sp|P74072|CAX_SYNY3 | Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 | 110 | 279 | 2.0E-14 |
sp|Q5TKG3|CAX1B_ORYSJ | Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 | 83 | 277 | 3.0E-14 |
sp|Q5TKG3|CAX1B_ORYSJ | Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 | 458 | 583 | 6.0E-14 |
sp|O34840|CHAA_BACSU | Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 | 439 | 588 | 6.0E-14 |
sp|Q6YXZ1|CAX4_ORYSJ | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 | 97 | 298 | 8.0E-14 |
sp|Q9P7B3|YI14_SCHPO | Putative cation exchanger C521.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC521.04c PE=1 SV=1 | 107 | 589 | 6.0E-13 |
sp|Q945S5|CAX4_ARATH | Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 | 99 | 272 | 7.0E-12 |
sp|Q39253|CAX1_ARATH | Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 | 95 | 295 | 3.0E-11 |
sp|Q93Z81|CAX3_ARATH | Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 | 99 | 278 | 6.0E-11 |
sp|Q5KTQ9|CAX1C_ORYSJ | Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1 | 452 | 552 | 6.0E-10 |
sp|Q769E5|CAX1A_ORYSJ | Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 | 99 | 277 | 2.0E-09 |
sp|O34840|CHAA_BACSU | Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 | 115 | 284 | 1.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0009987 | cellular process | No |
GO:0051179 | localization | No |
GO:0008150 | biological_process | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0051234 | establishment of localization | No |
GO:0005575 | cellular_component | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 40 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 102 | 124 | 22 |
2 | 175 | 197 | 22 |
3 | 218 | 240 | 22 |
4 | 250 | 269 | 19 |
5 | 437 | 459 | 22 |
6 | 474 | 496 | 22 |
7 | 505 | 527 | 22 |
8 | 537 | 559 | 22 |
9 | 571 | 590 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|727 MEEHHDEINHQDGVPVFRDCHDDESCQNYPPYQDHVDNDGASMLSAPSLPQSPSLLNHGVTRVWKSWHSIRRHVL PHNSLQWHRLDCNQQARGSFVGPLRDMVCSSWLNLLLVFVPVGFASHLLDASPLFVFASNALAIIPLSVLLTDAT EAIAAYAGDTVGALLNISLGNLVELILFMCASILGSVLVNLLLILGSALLVSSGASCEPTYNSTEAQLLACLLFV SVFAFLMPTAFSYTYLQRPSANSSLMLSRISSLLILAIYIVYLIHELRWHSRHHGHNKSLDHDVESHMSVDDEHL LRLPPLSISVSQPLPPRTIRFADQDNFGPALCNAGNNKTNGVPHIGASCFDSSANDDFEPRGRNCTDVDPEGWHS HQRPLRPRKHARSLSLGSREAHMDGDLRRVCSRSSLTTLHLLHDGRLGADQDVSRPQAASHVAVALALLGVSSAL MSLCAQLLVDTIDDVTRQTRLSEALIGLIVLPIVGNVAEYVTVVAVAARDKLDLAIAVAVGSSIQIALCVTPLTV IAGWLMQRHLSLTFNFFEMATLMGGVLLVNLLVLTESGGGLRMSALKGALMCACYVIVGLGAYFAPEEM* |
Coding | >OphauB2|727 ATGGAAGAGCACCATGATGAAATCAACCACCAAGACGGCGTGCCTGTCTTTCGAGACTGCCATGACGACGAGTCT TGTCAAAACTACCCGCCCTACCAAGACCATGTCGACAATGACGGTGCTTCAATGCTGTCTGCGCCCAGTCTGCCC CAATCCCCCTCCCTGCTGAACCATGGCGTCACCAGAGTCTGGAAGTCGTGGCATTCCATCAGACGCCACGTATTG CCCCACAACAGCCTGCAGTGGCATCGCCTCGACTGCAACCAACAAGCTCGAGGCTCCTTTGTCGGTCCGCTCCGC GACATGGTTTGTTCTTCGTGGCTGAATCTTCTCTTGGTTTTTGTCCCCGTGGGCTTTGCCAGCCATCTGCTCGAT GCCAGTCCCTTGTTTGTCTTTGCATCCAATGCTCTCGCCATTATTCCGCTATCTGTTCTCCTGACAGATGCCACC GAGGCCATTGCAGCCTACGCGGGCGACACTGTCGGTGCTCTGCTGAATATAAGTCTGGGCAATCTAGTCGAGCTG ATTCTCTTCATGTGTGCTTCTATTCTGGGTTCCGTCCTTGTTAATCTTTTGCTTATTCTTGGCTCCGCCCTGCTT GTCAGTAGTGGTGCTAGCTGTGAGCCCACGTATAACTCGACCGAGGCCCAGCTCTTGGCCTGTCTGCTCTTTGTC TCCGTCTTTGCGTTCCTCATGCCGACTGCGTTTAGCTACACATATCTTCAGAGGCCGTCTGCCAACAGCAGCCTC ATGCTGAGCAGAATATCCTCGTTGCTCATCTTGGCCATCTACATTGTATATCTGATTCATGAGCTGAGGTGGCAC TCGCGGCACCACGGCCACAACAAGAGCCTTGACCATGATGTCGAAAGTCACATGTCTGTTGACGACGAGCATTTG CTACGTCTTCCACCCCTGAGCATCTCTGTCTCCCAACCTCTACCCCCACGAACGATTCGCTTTGCCGATCAAGAC AATTTTGGCCCAGCACTCTGCAATGCTGGCAACAACAAGACCAATGGTGTGCCCCATATAGGCGCCTCTTGTTTC GACAGCAGCGCCAACGACGACTTTGAGCCTCGAGGGCGCAATTGCACCGACGTGGACCCGGAAGGCTGGCACTCA CACCAGCGCCCGCTGCGCCCTCGCAAACATGCCCGCTCCCTTTCTCTCGGCTCCCGCGAAGCTCACATGGACGGA GACTTGCGCCGTGTCTGCTCGCGCTCTAGCCTGACGACACTGCACCTGCTTCACGACGGCCGCTTGGGGGCCGAC CAAGATGTCAGCAGGCCTCAGGCAGCAAGCCATGTAGCCGTGGCTCTCGCTCTTCTCGGTGTCTCGTCGGCCCTC ATGTCACTCTGCGCTCAGCTGCTGGTCGATACAATTGACGATGTGACGCGCCAGACACGCCTGTCGGAAGCCCTC ATTGGCCTCATTGTGCTGCCTATTGTGGGCAATGTGGCAGAGTATGTAACCGTGGTGGCTGTGGCGGCGCGTGAT AAGCTCGACTTGGCCATTGCTGTGGCTGTCGGCTCGTCGATTCAGATTGCGCTGTGCGTGACGCCCCTGACGGTA ATTGCTGGCTGGCTCATGCAGCGGCACTTGTCCCTGACGTTTAACTTTTTCGAAATGGCAACGCTCATGGGGGGC GTGTTGCTGGTCAATCTCTTGGTGCTAACCGAGTCTGGAGGCGGCTTGAGGATGAGTGCGCTCAAAGGGGCCTTG ATGTGTGCATGCTATGTGATTGTCGGACTCGGAGCTTACTTTGCACCAGAGGAAATGTGA |
Transcript | >OphauB2|727 ATGGAAGAGCACCATGATGAAATCAACCACCAAGACGGCGTGCCTGTCTTTCGAGACTGCCATGACGACGAGTCT TGTCAAAACTACCCGCCCTACCAAGACCATGTCGACAATGACGGTGCTTCAATGCTGTCTGCGCCCAGTCTGCCC CAATCCCCCTCCCTGCTGAACCATGGCGTCACCAGAGTCTGGAAGTCGTGGCATTCCATCAGACGCCACGTATTG CCCCACAACAGCCTGCAGTGGCATCGCCTCGACTGCAACCAACAAGCTCGAGGCTCCTTTGTCGGTCCGCTCCGC GACATGGTTTGTTCTTCGTGGCTGAATCTTCTCTTGGTTTTTGTCCCCGTGGGCTTTGCCAGCCATCTGCTCGAT GCCAGTCCCTTGTTTGTCTTTGCATCCAATGCTCTCGCCATTATTCCGCTATCTGTTCTCCTGACAGATGCCACC GAGGCCATTGCAGCCTACGCGGGCGACACTGTCGGTGCTCTGCTGAATATAAGTCTGGGCAATCTAGTCGAGCTG ATTCTCTTCATGTGTGCTTCTATTCTGGGTTCCGTCCTTGTTAATCTTTTGCTTATTCTTGGCTCCGCCCTGCTT GTCAGTAGTGGTGCTAGCTGTGAGCCCACGTATAACTCGACCGAGGCCCAGCTCTTGGCCTGTCTGCTCTTTGTC TCCGTCTTTGCGTTCCTCATGCCGACTGCGTTTAGCTACACATATCTTCAGAGGCCGTCTGCCAACAGCAGCCTC ATGCTGAGCAGAATATCCTCGTTGCTCATCTTGGCCATCTACATTGTATATCTGATTCATGAGCTGAGGTGGCAC TCGCGGCACCACGGCCACAACAAGAGCCTTGACCATGATGTCGAAAGTCACATGTCTGTTGACGACGAGCATTTG CTACGTCTTCCACCCCTGAGCATCTCTGTCTCCCAACCTCTACCCCCACGAACGATTCGCTTTGCCGATCAAGAC AATTTTGGCCCAGCACTCTGCAATGCTGGCAACAACAAGACCAATGGTGTGCCCCATATAGGCGCCTCTTGTTTC GACAGCAGCGCCAACGACGACTTTGAGCCTCGAGGGCGCAATTGCACCGACGTGGACCCGGAAGGCTGGCACTCA CACCAGCGCCCGCTGCGCCCTCGCAAACATGCCCGCTCCCTTTCTCTCGGCTCCCGCGAAGCTCACATGGACGGA GACTTGCGCCGTGTCTGCTCGCGCTCTAGCCTGACGACACTGCACCTGCTTCACGACGGCCGCTTGGGGGCCGAC CAAGATGTCAGCAGGCCTCAGGCAGCAAGCCATGTAGCCGTGGCTCTCGCTCTTCTCGGTGTCTCGTCGGCCCTC ATGTCACTCTGCGCTCAGCTGCTGGTCGATACAATTGACGATGTGACGCGCCAGACACGCCTGTCGGAAGCCCTC ATTGGCCTCATTGTGCTGCCTATTGTGGGCAATGTGGCAGAGTATGTAACCGTGGTGGCTGTGGCGGCGCGTGAT AAGCTCGACTTGGCCATTGCTGTGGCTGTCGGCTCGTCGATTCAGATTGCGCTGTGCGTGACGCCCCTGACGGTA ATTGCTGGCTGGCTCATGCAGCGGCACTTGTCCCTGACGTTTAACTTTTTCGAAATGGCAACGCTCATGGGGGGC GTGTTGCTGGTCAATCTCTTGGTGCTAACCGAGTCTGGAGGCGGCTTGAGGATGAGTGCGCTCAAAGGGGCCTTG ATGTGTGCATGCTATGTGATTGTCGGACTCGGAGCTTACTTTGCACCAGAGGAAATGTGA |
Gene | >OphauB2|727 ATGGAAGAGCACCATGATGAAATCAACCACCAAGACGGCGTGCCTGTCTTTCGAGACTGCCATGACGACGAGTCT TGTCAAAACTACCCGCCCTACCAAGACCATGTCGACAATGACGGTGCTTCAATGCTGTCTGCGCCCAGTCTGCCC CAATCCCCCTCCCTGCTGAACCGTGAGTCTTAGTCTCTCACCAGGTTTAGCCCAAGAGCTTTCTTTGACCGACGT AATCAAAAGATGGCGTCACCAGAGTCTGGAAGTCGTGGCATTCCATCAGACGCCACGTATTGCCCCACAACAGCC TGCAGTGGCATCGCCTCGACTGCAACCAACAAGCTCGAGGCTCCTTTGTCGGTCCGCTCCGCGACATGGTTTGTT CTTCGTGGCTGAATCTTCTCTTGGTTTTTGTCCCCGTGGGCTTTGCCAGCCATCTGCTCGATGCCAGTCCCTTGT TTGTCTTTGCATCCAATGCTCTCGCCATTATTCCGCTATCTGTTCTCCTGACAGATGCCACCGAGGCCATTGCAG CCTACGCGGGCGACACTGTCGGTGCTCTGCTGAATATAAGTCTGGGCAATCTAGTCGAGCTGATTCTCTTGTAAG TCAAGCTTCTGTCCTTGTTTTCTCACCAACTGACTTGACCAAATACAGCATGTGTGTACCTCTGATGGAGCCTTG TAAGCAAGGAAATACATGCTCATCAGCTTCAGTGTTGCCCTGCGCAGCGGCCATGTCACCATCGTCCAGGCTTCT ATTCTGGGTTCCGTCCTTGTTAATCTTTTGCTTATTCTTGGCTCCGCCCTGCTTGTCAGTAGTGGTGCTAGCTGT GAGCCCACGTATAACTCGACCGAGGCCCAGCTCTTGGCCTGTCTGCTCTTTGTCTCCGTCTTTGCGTTCCTCATG CCGGTACGGGCGCCTCTCTCCTCCTATATTGCATAGAGGCTGATCATGTTGGACGAGCAGACTGCGTTTAGCTAC ACATATCTTCAGAGGCCGTCTGCCAACAGCAGCCTCATGCTGAGCAGAATATCCTCGTTGCTCATCTTGGCCATC TACATTGTATATCTGATTCATGAGCTGAGGTGGCACTCGCGGCACCACGGCCACAACAAGAGCCTTGACCATGAT GTCGAAAGTCACATGTCTGTTGACGACGAGCATTTGCTACGTCTTCCACCCCTGAGCATCTCTGTCTCCCAACCT CTACCCCCACGAACGATTCGCTTTGCCGATCAAGACAATTTTGGCCCAGCACTCTGCAATGCTGGCAACAACAAG ACCAATGGTGTGCCCCATATAGGCGCCTCTTGTTTCGACAGCAGCGCCAACGACGACTTTGAGCCTCGAGGGCGC AATTGCACCGACGTGGACCCGGAAGGCTGGCACTCACACCAGCGCCCGCTGCGCCCTCGCAAACATGCCCGCTCC CTTTCTCTCGGCTCCCGCGAAGCTCACATGGACGGAGACTTGCGCCGTGTCTGCTCGCGCTCTAGCCTGACGACA CTGCACCTGCTTCACGACGGCCGCTTGGGGGCCGACCAAGATGTCAGCAGGCCTCAGGCAGCAAGCCATGTAGCC GTGGCTCTCGCTCTTCTCGGTGTCTCGTCGGCCCTCATGTCACTCTGCGCTCAGCTGCTGGTCGATACAATTGAC GATGTGACGCGCCAGACACGCCTGTCGGAAGCCCTCATTGGCCTCATTGTGCTGCCTATTGTGGGCAATGTGGCA GAGTATGTAACCGTGGTGGCTGTGGCGGCGCGTGATAAGCTCGACTTGGCCATTGCTGTGGCTGTCGGCTCGTCG ATTCAGATTGCGCTGTGCGTGACGCCCCTGACGGTAATTGCTGGCTGGCTCATGCAGCGGCACTTGTCCCTGACG TTTAACTTTTTCGAAATGGCAACGCTCATGGGGGGCGTGTTGCTGGTCAATCTCTTGGTGCTAACCGAGTCTGGA GGCGGCTTGAGGATGAGTGCGCTCAAAGGGGCCTTGATGTGTGCATGCTATGTGATTGTCGGGTGAGTCGTCACA GACCAACTCCAAGGCCATGTAAAGCCAGCTAACGAGTACTTGCTAGACTCGGAGCTTACTTTGCACCAGAGGAAA TGTGA |