Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|7254
Gene name
Location	Contig_75:63482..64486
Strand	+
Gene length (bp)	1004
Transcript length (bp)	948
Coding sequence length (bp)	948
Protein length (aa)	316

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11790	Glyco_hydro_cc	Glycosyl hydrolase catalytic core	6.8E-69	16	271

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q09788\|ASL1_SCHPO	Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1	14	272	1.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|7254 MVALVNMALVASSKRGLCFTPDKTTPKDNAIWIKPGSSIKWYYNYGSIPSPAYSHLSQDDVEYVPMMWGIGPDAK STQFLDQIKALVHGGTNISHVLGFNEPDVGSDVGGSQIQPRDAAEAWVANFEPLAQMGIKLGLPACSGGWGGMAW LHQFLGNCSERLSTPQQRRNCTWDFLPVHWYDNFAGLASHIGQRRGVWPEAEIWVTEYAYAHQDLETTQAFYNQS IDYFEKLDYMGRYSYFGAFRASKANVGPNGAFLSAGGQLTDIGAWYLGFGATGVKPESTQSWAAAAVPDVVLIGL VACLSLASLALGAAG*
Coding	>OphauB2\|7254 ATGGTGGCCCTTGTAAACATGGCCCTTGTGGCATCGTCAAAAAGGGGCCTCTGCTTCACCCCTGACAAGACGACT CCCAAGGACAACGCCATCTGGATAAAGCCAGGCAGCAGCATCAAGTGGTACTACAACTACGGGAGCATACCCTCG CCAGCTTACTCGCACCTATCCCAAGATGACGTCGAGTACGTGCCCATGATGTGGGGCATTGGCCCTGATGCCAAG AGCACGCAGTTCCTAGACCAGATCAAGGCACTTGTCCATGGCGGCACAAATATTTCTCATGTACTAGGCTTCAAC GAGCCAGACGTGGGCAGCGACGTGGGCGGCAGCCAGATTCAGCCGCGCGACGCAGCCGAGGCGTGGGTGGCCAAC TTTGAACCGCTTGCGCAGATGGGCATCAAACTTGGTCTCCCAGCGTGCAGCGGCGGCTGGGGAGGCATGGCGTGG CTACACCAGTTCTTGGGCAACTGCTCTGAGCGGCTAAGCACGCCGCAACAGAGGAGAAACTGTACATGGGACTTT TTGCCAGTGCATTGGTACGACAACTTTGCAGGGCTGGCATCTCACATTGGCCAACGCAGAGGCGTGTGGCCCGAG GCAGAAATTTGGGTGACGGAATACGCCTACGCGCATCAAGATCTCGAGACGACGCAGGCCTTTTACAACCAAAGC ATCGACTACTTTGAAAAGCTCGACTACATGGGGCGTTATTCCTATTTTGGCGCCTTCCGGGCGAGCAAGGCCAAC GTGGGCCCCAACGGCGCCTTTCTCAGCGCGGGCGGCCAGCTGACAGACATTGGCGCGTGGTATCTGGGATTTGGC GCCACGGGAGTCAAGCCCGAGAGCACGCAGAGTTGGGCCGCAGCAGCAGTGCCAGACGTGGTGTTGATTGGACTT GTAGCCTGTCTGAGCCTGGCGAGCTTGGCGCTGGGGGCCGCCGGATAG
Transcript	>OphauB2\|7254 ATGGTGGCCCTTGTAAACATGGCCCTTGTGGCATCGTCAAAAAGGGGCCTCTGCTTCACCCCTGACAAGACGACT CCCAAGGACAACGCCATCTGGATAAAGCCAGGCAGCAGCATCAAGTGGTACTACAACTACGGGAGCATACCCTCG CCAGCTTACTCGCACCTATCCCAAGATGACGTCGAGTACGTGCCCATGATGTGGGGCATTGGCCCTGATGCCAAG AGCACGCAGTTCCTAGACCAGATCAAGGCACTTGTCCATGGCGGCACAAATATTTCTCATGTACTAGGCTTCAAC GAGCCAGACGTGGGCAGCGACGTGGGCGGCAGCCAGATTCAGCCGCGCGACGCAGCCGAGGCGTGGGTGGCCAAC TTTGAACCGCTTGCGCAGATGGGCATCAAACTTGGTCTCCCAGCGTGCAGCGGCGGCTGGGGAGGCATGGCGTGG CTACACCAGTTCTTGGGCAACTGCTCTGAGCGGCTAAGCACGCCGCAACAGAGGAGAAACTGTACATGGGACTTT TTGCCAGTGCATTGGTACGACAACTTTGCAGGGCTGGCATCTCACATTGGCCAACGCAGAGGCGTGTGGCCCGAG GCAGAAATTTGGGTGACGGAATACGCCTACGCGCATCAAGATCTCGAGACGACGCAGGCCTTTTACAACCAAAGC ATCGACTACTTTGAAAAGCTCGACTACATGGGGCGTTATTCCTATTTTGGCGCCTTCCGGGCGAGCAAGGCCAAC GTGGGCCCCAACGGCGCCTTTCTCAGCGCGGGCGGCCAGCTGACAGACATTGGCGCGTGGTATCTGGGATTTGGC GCCACGGGAGTCAAGCCCGAGAGCACGCAGAGTTGGGCCGCAGCAGCAGTGCCAGACGTGGTGTTGATTGGACTT GTAGCCTGTCTGAGCCTGGCGAGCTTGGCGCTGGGGGCCGCCGGATAG
Gene	>OphauB2\|7254 ATGGTGGCCCTTGTAAACATGGCCCTTGTGGCATCGTCAAAAAGGGGCCTCTGCTTCACCCCTGACAAGACGACT CCCAAGGACAACGCCATCTGGATAAAGCCAGGCAGCAGCATCAAGTGGTACTACAACTACGGGAGCATACCCTCG CCAGCTTACTCGCACCTATCCCAAGATGACGTCGAGTACGTGCCCATGATGTGGGGCATTGGCCCTGATGCCAAG AGCACGCAGTTCCTAGACCAGATCAAGGCACTTGTCCATGGCGGCACAAATATTTCTCATGTACTAGGCTTCAAC GAGCCAGACGTGGGCAGCGACGTGGGCGGCAGCCAGATTCAGCCGCGCGACGCAGCCGAGGCGTGGGTGGCCAAC TTTGAACCGCTTGCGCAGATGGGCATCAAACTTGGTCTCCCAGCGTGCAGCGGCGGCTGGGGAGGCATGGCGTGG CTACACCAGTTCTTGGGCAACTGCTCTGAGCGGCTAAGCACGCCGCAACAGAGGAGAAACTGTACATGGGACTTT TTGCCAGTGCATTGGTACGACAACTTTGCAGGGCTGGCATCTCACATTGGCCAACGCAGAGGCGTGTAAGTTGGG ACCAGACGGCGCGGCGGGCTGCATGTATTGACTTTTTTGCGGCCAGGTGGCCCGAGGCAGAAATTTGGGTGACGG AATACGCCTACGCGCATCAAGATCTCGAGACGACGCAGGCCTTTTACAACCAAAGCATCGACTACTTTGAAAAGC TCGACTACATGGGGCGTTATTCCTATTTTGGCGCCTTCCGGGCGAGCAAGGCCAACGTGGGCCCCAACGGCGCCT TTCTCAGCGCGGGCGGCCAGCTGACAGACATTGGCGCGTGGTATCTGGGATTTGGCGCCACGGGAGTCAAGCCCG AGAGCACGCAGAGTTGGGCCGCAGCAGCAGTGCCAGACGTGGTGTTGATTGGACTTGTAGCCTGTCTGAGCCTGG CGAGCTTGGCGCTGGGGGCCGCCGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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