Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7254
Gene name
LocationContig_75:63482..64486
Strand+
Gene length (bp)1004
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11790 Glyco_hydro_cc Glycosyl hydrolase catalytic core 6.8E-69 16 271

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q09788|ASL1_SCHPO Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 14 272 1.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7254
MVALVNMALVASSKRGLCFTPDKTTPKDNAIWIKPGSSIKWYYNYGSIPSPAYSHLSQDDVEYVPMMWGIGPDAK
STQFLDQIKALVHGGTNISHVLGFNEPDVGSDVGGSQIQPRDAAEAWVANFEPLAQMGIKLGLPACSGGWGGMAW
LHQFLGNCSERLSTPQQRRNCTWDFLPVHWYDNFAGLASHIGQRRGVWPEAEIWVTEYAYAHQDLETTQAFYNQS
IDYFEKLDYMGRYSYFGAFRASKANVGPNGAFLSAGGQLTDIGAWYLGFGATGVKPESTQSWAAAAVPDVVLIGL
VACLSLASLALGAAG*
Coding >OphauB2|7254
ATGGTGGCCCTTGTAAACATGGCCCTTGTGGCATCGTCAAAAAGGGGCCTCTGCTTCACCCCTGACAAGACGACT
CCCAAGGACAACGCCATCTGGATAAAGCCAGGCAGCAGCATCAAGTGGTACTACAACTACGGGAGCATACCCTCG
CCAGCTTACTCGCACCTATCCCAAGATGACGTCGAGTACGTGCCCATGATGTGGGGCATTGGCCCTGATGCCAAG
AGCACGCAGTTCCTAGACCAGATCAAGGCACTTGTCCATGGCGGCACAAATATTTCTCATGTACTAGGCTTCAAC
GAGCCAGACGTGGGCAGCGACGTGGGCGGCAGCCAGATTCAGCCGCGCGACGCAGCCGAGGCGTGGGTGGCCAAC
TTTGAACCGCTTGCGCAGATGGGCATCAAACTTGGTCTCCCAGCGTGCAGCGGCGGCTGGGGAGGCATGGCGTGG
CTACACCAGTTCTTGGGCAACTGCTCTGAGCGGCTAAGCACGCCGCAACAGAGGAGAAACTGTACATGGGACTTT
TTGCCAGTGCATTGGTACGACAACTTTGCAGGGCTGGCATCTCACATTGGCCAACGCAGAGGCGTGTGGCCCGAG
GCAGAAATTTGGGTGACGGAATACGCCTACGCGCATCAAGATCTCGAGACGACGCAGGCCTTTTACAACCAAAGC
ATCGACTACTTTGAAAAGCTCGACTACATGGGGCGTTATTCCTATTTTGGCGCCTTCCGGGCGAGCAAGGCCAAC
GTGGGCCCCAACGGCGCCTTTCTCAGCGCGGGCGGCCAGCTGACAGACATTGGCGCGTGGTATCTGGGATTTGGC
GCCACGGGAGTCAAGCCCGAGAGCACGCAGAGTTGGGCCGCAGCAGCAGTGCCAGACGTGGTGTTGATTGGACTT
GTAGCCTGTCTGAGCCTGGCGAGCTTGGCGCTGGGGGCCGCCGGATAG
Transcript >OphauB2|7254
ATGGTGGCCCTTGTAAACATGGCCCTTGTGGCATCGTCAAAAAGGGGCCTCTGCTTCACCCCTGACAAGACGACT
CCCAAGGACAACGCCATCTGGATAAAGCCAGGCAGCAGCATCAAGTGGTACTACAACTACGGGAGCATACCCTCG
CCAGCTTACTCGCACCTATCCCAAGATGACGTCGAGTACGTGCCCATGATGTGGGGCATTGGCCCTGATGCCAAG
AGCACGCAGTTCCTAGACCAGATCAAGGCACTTGTCCATGGCGGCACAAATATTTCTCATGTACTAGGCTTCAAC
GAGCCAGACGTGGGCAGCGACGTGGGCGGCAGCCAGATTCAGCCGCGCGACGCAGCCGAGGCGTGGGTGGCCAAC
TTTGAACCGCTTGCGCAGATGGGCATCAAACTTGGTCTCCCAGCGTGCAGCGGCGGCTGGGGAGGCATGGCGTGG
CTACACCAGTTCTTGGGCAACTGCTCTGAGCGGCTAAGCACGCCGCAACAGAGGAGAAACTGTACATGGGACTTT
TTGCCAGTGCATTGGTACGACAACTTTGCAGGGCTGGCATCTCACATTGGCCAACGCAGAGGCGTGTGGCCCGAG
GCAGAAATTTGGGTGACGGAATACGCCTACGCGCATCAAGATCTCGAGACGACGCAGGCCTTTTACAACCAAAGC
ATCGACTACTTTGAAAAGCTCGACTACATGGGGCGTTATTCCTATTTTGGCGCCTTCCGGGCGAGCAAGGCCAAC
GTGGGCCCCAACGGCGCCTTTCTCAGCGCGGGCGGCCAGCTGACAGACATTGGCGCGTGGTATCTGGGATTTGGC
GCCACGGGAGTCAAGCCCGAGAGCACGCAGAGTTGGGCCGCAGCAGCAGTGCCAGACGTGGTGTTGATTGGACTT
GTAGCCTGTCTGAGCCTGGCGAGCTTGGCGCTGGGGGCCGCCGGATAG
Gene >OphauB2|7254
ATGGTGGCCCTTGTAAACATGGCCCTTGTGGCATCGTCAAAAAGGGGCCTCTGCTTCACCCCTGACAAGACGACT
CCCAAGGACAACGCCATCTGGATAAAGCCAGGCAGCAGCATCAAGTGGTACTACAACTACGGGAGCATACCCTCG
CCAGCTTACTCGCACCTATCCCAAGATGACGTCGAGTACGTGCCCATGATGTGGGGCATTGGCCCTGATGCCAAG
AGCACGCAGTTCCTAGACCAGATCAAGGCACTTGTCCATGGCGGCACAAATATTTCTCATGTACTAGGCTTCAAC
GAGCCAGACGTGGGCAGCGACGTGGGCGGCAGCCAGATTCAGCCGCGCGACGCAGCCGAGGCGTGGGTGGCCAAC
TTTGAACCGCTTGCGCAGATGGGCATCAAACTTGGTCTCCCAGCGTGCAGCGGCGGCTGGGGAGGCATGGCGTGG
CTACACCAGTTCTTGGGCAACTGCTCTGAGCGGCTAAGCACGCCGCAACAGAGGAGAAACTGTACATGGGACTTT
TTGCCAGTGCATTGGTACGACAACTTTGCAGGGCTGGCATCTCACATTGGCCAACGCAGAGGCGTGTAAGTTGGG
ACCAGACGGCGCGGCGGGCTGCATGTATTGACTTTTTTGCGGCCAGGTGGCCCGAGGCAGAAATTTGGGTGACGG
AATACGCCTACGCGCATCAAGATCTCGAGACGACGCAGGCCTTTTACAACCAAAGCATCGACTACTTTGAAAAGC
TCGACTACATGGGGCGTTATTCCTATTTTGGCGCCTTCCGGGCGAGCAAGGCCAACGTGGGCCCCAACGGCGCCT
TTCTCAGCGCGGGCGGCCAGCTGACAGACATTGGCGCGTGGTATCTGGGATTTGGCGCCACGGGAGTCAAGCCCG
AGAGCACGCAGAGTTGGGCCGCAGCAGCAGTGCCAGACGTGGTGTTGATTGGACTTGTAGCCTGTCTGAGCCTGG
CGAGCTTGGCGCTGGGGGCCGCCGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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