Protein ID | OphauB2|7230 |
Gene name | |
Location | Contig_74:86977..90037 |
Strand | - |
Gene length (bp) | 3060 |
Transcript length (bp) | 3060 |
Coding sequence length (bp) | 3060 |
Protein length (aa) | 1020 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02194 | PXA | PXA domain | 1.3E-33 | 161 | 337 |
PF08628 | Nexin_C | Sorting nexin C terminal | 2.5E-19 | 883 | 999 |
PF00787 | PX | PX domain | 1.3E-04 | 554 | 633 |
GO Term | Description | Terminal node |
---|---|---|
GO:0035091 | phosphatidylinositol binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005543 | phospholipid binding | No |
GO:0005488 | binding | No |
GO:0008289 | lipid binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 64 | 86 | 22 |
2 | 91 | 108 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|7230 MAASSSADDAQWSPTTPVSPKTLRPNAPVKEKRPQGVDETHPTIPSPRSADSPVSILATKALDFIATATPLSLLG LAVAFSAVTYAILGRLGLLIIGAVGGVVAFVSLEARNPQIARAVSREKGTKVLDRVWLDVQNTRRIAEAGPDDEH LAIKVLDDLRPETRDALGGLVDAVIRDYVKWWYSPIIPTDHSFPLACRKTLNSYLLAVANRLSRKRPADAFLDLL TNCSSIIIVVMSELAAAFADLPPESNMTAADAVYNYLASNPDSRLANLLNQRQQAAKFKMVAEDLLSFLDQNTQN CDAARVFLREIVANSILETTLQTCSKAEWINGWIVYLLEAGEPDLNQAIDVGMQTARDSGSNVFADIDGNVGNIG IAKPSRPSAESDHSRRKESLGHKRRLSKADEKMEEAVTTVGEAKPEARKRKPRVGELDLSHSSGTGSAKALGGSD HSLAPSWQSDKSLAADNLPLTPRSAMDSSSQSSSPQRTSGSQAFTKFEQIVPEGQGDEEAPSKQLLTLHNATFTL HDEATGDGSKVRSKPTWDYLIQVEPACESHSGWMIVRRYSDFETLHEIVRRIATISGATAFTETHKELPKWKMHS RESLRGELERYLRDACWYASLAESEGMKRFLEKSQGHTHSNSNSKSFGWDSVGKNMLDVLSTAPKGAVEGGRTLV GGVLGNFAGLAKKPAAGSLDMTPSSGRLSISGASIKSPAKSERTSLDSQRSSIISTQPAKMPPMERQPSFQLAQS EAEADLSRSGRLERAETWSASPSALPSREHSRTSSLAPLRSPSAVSLDLLKLPPPPDQMADDYSVPGDAPRPKTS DGGSLHHERHGSGQQPSKKTPATRPSKQYAQLSENETRVAVELLFAIINEMYTLSSAWNIRRTLLTAAKSFLLRP GNPSLLTVQALIQKSLLDANTADAGIAASLRKLRQNSLPTDEELAAWPPGLSADDKERLAVKARKLLIQSGVPAA LMGVMGQAATGEALGRVFDCLQIEEVARGLLFGLILQAVRIVTH* |
Coding | >OphauB2|7230 ATGGCCGCCTCTTCCTCGGCCGACGACGCGCAATGGTCGCCCACGACGCCTGTGAGTCCAAAGACGCTGCGGCCC AACGCTCCGGTGAAGGAGAAACGACCCCAGGGGGTTGACGAGACGCATCCGACCATTCCGTCGCCGCGCAGTGCC GACTCTCCCGTCAGCATCCTGGCCACAAAGGCGCTCGACTTTATCGCAACTGCCACGCCGCTATCGCTGCTCGGA CTCGCTGTTGCCTTTTCGGCCGTCACCTATGCAATACTGGGAAGACTGGGCCTGCTCATTATTGGGGCGGTTGGA GGAGTCGTGGCCTTTGTCTCCCTCGAGGCTCGCAATCCGCAAATAGCCCGGGCTGTCAGCAGAGAAAAGGGGACC AAGGTCTTGGACAGAGTCTGGCTTGATGTGCAAAACACGAGACGGATTGCAGAGGCAGGCCCCGACGACGAGCAC TTAGCCATCAAGGTCTTGGACGATTTGCGCCCCGAAACTCGCGATGCGCTGGGCGGGCTGGTGGACGCCGTCATC CGAGACTACGTCAAGTGGTGGTACAGCCCCATCATACCGACGGACCACTCGTTCCCCCTGGCCTGCCGCAAGACG CTCAACTCGTACTTGCTGGCAGTGGCCAATCGCCTGTCGCGAAAACGGCCCGCCGATGCCTTTCTCGACCTACTG ACCAATTGCTCCTCCATCATTATTGTCGTCATGTCGGAGCTGGCGGCCGCTTTTGCCGATTTGCCTCCCGAGTCC AACATGACTGCTGCCGACGCTGTCTACAACTATCTGGCCTCGAACCCCGACTCGCGGCTGGCCAACCTTCTCAAC CAGCGGCAACAGGCTGCCAAGTTTAAAATGGTTGCCGAGGACCTGCTGAGCTTCCTGGACCAAAACACACAAAAC TGCGACGCGGCGCGTGTCTTTTTGCGCGAGATTGTTGCAAACTCGATACTCGAGACCACACTTCAAACATGTAGC AAGGCGGAGTGGATCAATGGGTGGATTGTTTACCTGCTCGAGGCTGGAGAGCCGGACCTGAACCAGGCCATTGAC GTGGGCATGCAGACTGCTCGCGACTCGGGCAGCAACGTCTTTGCCGACATTGACGGCAATGTGGGCAACATTGGC ATCGCCAAGCCCAGCCGCCCCAGCGCCGAGTCGGACCACAGTCGGCGCAAAGAGTCGCTGGGCCACAAGAGACGA CTCAGCAAGGCCGACGAGAAGATGGAGGAGGCGGTGACGACTGTTGGCGAAGCAAAGCCCGAGGCGCGCAAAAGG AAGCCGAGGGTTGGAGAGCTGGACCTCTCTCACAGCAGCGGGACAGGCAGTGCAAAAGCTCTGGGCGGCTCAGAT CACAGCCTGGCGCCGTCGTGGCAGTCGGACAAGTCTTTGGCGGCGGACAATTTGCCGCTGACGCCGCGGTCTGCC ATGGACTCGTCGAGCCAGAGCTCGTCGCCACAAAGAACAAGCGGCAGCCAGGCATTCACCAAGTTTGAGCAGATT GTTCCCGAGGGTCAAGGCGACGAGGAAGCGCCCAGCAAGCAGCTGCTGACTCTGCACAATGCCACCTTTACCCTG CACGACGAGGCCACGGGCGACGGCTCCAAGGTGCGCAGCAAGCCGACGTGGGACTATTTGATACAGGTGGAGCCG GCGTGCGAGTCGCACTCGGGGTGGATGATTGTACGGCGGTACTCAGACTTTGAAACGCTGCACGAGATTGTGCGA CGCATCGCCACGATTTCGGGGGCCACGGCCTTTACCGAGACGCACAAGGAGCTGCCCAAGTGGAAGATGCACAGC AGAGAGTCGCTGCGGGGCGAGCTGGAGCGCTATCTGCGCGACGCCTGCTGGTATGCGTCGCTGGCGGAAAGCGAA GGCATGAAGCGCTTCCTGGAGAAGTCGCAGGGCCACACACACAGCAACTCCAACTCCAAGTCGTTTGGCTGGGAC TCGGTGGGCAAGAACATGCTCGACGTGCTGAGCACAGCCCCCAAGGGCGCCGTGGAGGGCGGGCGGACGCTGGTG GGCGGCGTCTTGGGCAACTTTGCCGGGCTGGCCAAGAAGCCGGCCGCGGGCTCGCTCGACATGACGCCAAGCTCG GGCCGTTTGTCCATTTCTGGCGCCAGCATCAAGTCGCCGGCCAAGTCTGAGCGCACCAGCCTCGACAGCCAGCGG TCGTCCATTATCTCGACGCAGCCGGCCAAGATGCCGCCCATGGAGCGCCAGCCCAGCTTCCAGCTTGCGCAGAGC GAAGCTGAGGCCGACTTGAGCCGCTCGGGCCGGCTGGAGCGCGCAGAGACGTGGTCGGCGTCGCCCAGTGCGCTG CCGAGTCGCGAGCACAGCCGCACGTCGAGCCTGGCGCCTCTGCGGTCGCCCTCGGCCGTCAGCCTCGACCTCTTG AAGCTGCCGCCGCCGCCGGACCAAATGGCGGACGACTACAGCGTGCCAGGCGACGCGCCGCGGCCCAAGACTTCA GACGGCGGCTCGCTTCACCATGAGCGCCATGGCAGCGGCCAGCAGCCGAGCAAGAAGACGCCTGCCACCAGGCCC AGCAAGCAGTATGCGCAGCTGTCTGAGAATGAGACGCGCGTGGCGGTTGAGCTTCTCTTTGCCATCATCAACGAA ATGTACACCCTCTCGTCGGCCTGGAACATTCGCCGCACTCTGCTCACGGCCGCCAAGTCGTTTTTGCTGCGCCCG GGCAACCCCTCGCTGCTGACGGTGCAGGCGCTCATTCAAAAGTCGCTCCTCGACGCCAACACGGCCGACGCCGGC ATTGCCGCCTCGCTGCGCAAACTCCGCCAAAACTCTTTGCCCACGGACGAGGAGCTGGCCGCGTGGCCGCCTGGG CTGTCGGCCGACGACAAGGAAAGGCTGGCAGTCAAGGCGCGCAAGCTGCTGATTCAGAGCGGCGTGCCGGCGGCG CTCATGGGCGTCATGGGGCAGGCGGCAACCGGCGAGGCTCTGGGCCGGGTGTTTGACTGTTTGCAGATTGAAGAG GTGGCGCGAGGCTTGCTGTTTGGGCTCATTTTGCAGGCGGTGAGGATAGTGACGCATTGA |
Transcript | >OphauB2|7230 ATGGCCGCCTCTTCCTCGGCCGACGACGCGCAATGGTCGCCCACGACGCCTGTGAGTCCAAAGACGCTGCGGCCC AACGCTCCGGTGAAGGAGAAACGACCCCAGGGGGTTGACGAGACGCATCCGACCATTCCGTCGCCGCGCAGTGCC GACTCTCCCGTCAGCATCCTGGCCACAAAGGCGCTCGACTTTATCGCAACTGCCACGCCGCTATCGCTGCTCGGA CTCGCTGTTGCCTTTTCGGCCGTCACCTATGCAATACTGGGAAGACTGGGCCTGCTCATTATTGGGGCGGTTGGA GGAGTCGTGGCCTTTGTCTCCCTCGAGGCTCGCAATCCGCAAATAGCCCGGGCTGTCAGCAGAGAAAAGGGGACC AAGGTCTTGGACAGAGTCTGGCTTGATGTGCAAAACACGAGACGGATTGCAGAGGCAGGCCCCGACGACGAGCAC TTAGCCATCAAGGTCTTGGACGATTTGCGCCCCGAAACTCGCGATGCGCTGGGCGGGCTGGTGGACGCCGTCATC CGAGACTACGTCAAGTGGTGGTACAGCCCCATCATACCGACGGACCACTCGTTCCCCCTGGCCTGCCGCAAGACG CTCAACTCGTACTTGCTGGCAGTGGCCAATCGCCTGTCGCGAAAACGGCCCGCCGATGCCTTTCTCGACCTACTG ACCAATTGCTCCTCCATCATTATTGTCGTCATGTCGGAGCTGGCGGCCGCTTTTGCCGATTTGCCTCCCGAGTCC AACATGACTGCTGCCGACGCTGTCTACAACTATCTGGCCTCGAACCCCGACTCGCGGCTGGCCAACCTTCTCAAC CAGCGGCAACAGGCTGCCAAGTTTAAAATGGTTGCCGAGGACCTGCTGAGCTTCCTGGACCAAAACACACAAAAC TGCGACGCGGCGCGTGTCTTTTTGCGCGAGATTGTTGCAAACTCGATACTCGAGACCACACTTCAAACATGTAGC AAGGCGGAGTGGATCAATGGGTGGATTGTTTACCTGCTCGAGGCTGGAGAGCCGGACCTGAACCAGGCCATTGAC GTGGGCATGCAGACTGCTCGCGACTCGGGCAGCAACGTCTTTGCCGACATTGACGGCAATGTGGGCAACATTGGC ATCGCCAAGCCCAGCCGCCCCAGCGCCGAGTCGGACCACAGTCGGCGCAAAGAGTCGCTGGGCCACAAGAGACGA CTCAGCAAGGCCGACGAGAAGATGGAGGAGGCGGTGACGACTGTTGGCGAAGCAAAGCCCGAGGCGCGCAAAAGG AAGCCGAGGGTTGGAGAGCTGGACCTCTCTCACAGCAGCGGGACAGGCAGTGCAAAAGCTCTGGGCGGCTCAGAT CACAGCCTGGCGCCGTCGTGGCAGTCGGACAAGTCTTTGGCGGCGGACAATTTGCCGCTGACGCCGCGGTCTGCC ATGGACTCGTCGAGCCAGAGCTCGTCGCCACAAAGAACAAGCGGCAGCCAGGCATTCACCAAGTTTGAGCAGATT GTTCCCGAGGGTCAAGGCGACGAGGAAGCGCCCAGCAAGCAGCTGCTGACTCTGCACAATGCCACCTTTACCCTG CACGACGAGGCCACGGGCGACGGCTCCAAGGTGCGCAGCAAGCCGACGTGGGACTATTTGATACAGGTGGAGCCG GCGTGCGAGTCGCACTCGGGGTGGATGATTGTACGGCGGTACTCAGACTTTGAAACGCTGCACGAGATTGTGCGA CGCATCGCCACGATTTCGGGGGCCACGGCCTTTACCGAGACGCACAAGGAGCTGCCCAAGTGGAAGATGCACAGC AGAGAGTCGCTGCGGGGCGAGCTGGAGCGCTATCTGCGCGACGCCTGCTGGTATGCGTCGCTGGCGGAAAGCGAA GGCATGAAGCGCTTCCTGGAGAAGTCGCAGGGCCACACACACAGCAACTCCAACTCCAAGTCGTTTGGCTGGGAC TCGGTGGGCAAGAACATGCTCGACGTGCTGAGCACAGCCCCCAAGGGCGCCGTGGAGGGCGGGCGGACGCTGGTG GGCGGCGTCTTGGGCAACTTTGCCGGGCTGGCCAAGAAGCCGGCCGCGGGCTCGCTCGACATGACGCCAAGCTCG GGCCGTTTGTCCATTTCTGGCGCCAGCATCAAGTCGCCGGCCAAGTCTGAGCGCACCAGCCTCGACAGCCAGCGG TCGTCCATTATCTCGACGCAGCCGGCCAAGATGCCGCCCATGGAGCGCCAGCCCAGCTTCCAGCTTGCGCAGAGC GAAGCTGAGGCCGACTTGAGCCGCTCGGGCCGGCTGGAGCGCGCAGAGACGTGGTCGGCGTCGCCCAGTGCGCTG CCGAGTCGCGAGCACAGCCGCACGTCGAGCCTGGCGCCTCTGCGGTCGCCCTCGGCCGTCAGCCTCGACCTCTTG AAGCTGCCGCCGCCGCCGGACCAAATGGCGGACGACTACAGCGTGCCAGGCGACGCGCCGCGGCCCAAGACTTCA GACGGCGGCTCGCTTCACCATGAGCGCCATGGCAGCGGCCAGCAGCCGAGCAAGAAGACGCCTGCCACCAGGCCC AGCAAGCAGTATGCGCAGCTGTCTGAGAATGAGACGCGCGTGGCGGTTGAGCTTCTCTTTGCCATCATCAACGAA ATGTACACCCTCTCGTCGGCCTGGAACATTCGCCGCACTCTGCTCACGGCCGCCAAGTCGTTTTTGCTGCGCCCG GGCAACCCCTCGCTGCTGACGGTGCAGGCGCTCATTCAAAAGTCGCTCCTCGACGCCAACACGGCCGACGCCGGC ATTGCCGCCTCGCTGCGCAAACTCCGCCAAAACTCTTTGCCCACGGACGAGGAGCTGGCCGCGTGGCCGCCTGGG CTGTCGGCCGACGACAAGGAAAGGCTGGCAGTCAAGGCGCGCAAGCTGCTGATTCAGAGCGGCGTGCCGGCGGCG CTCATGGGCGTCATGGGGCAGGCGGCAACCGGCGAGGCTCTGGGCCGGGTGTTTGACTGTTTGCAGATTGAAGAG GTGGCGCGAGGCTTGCTGTTTGGGCTCATTTTGCAGGCGGTGAGGATAGTGACGCATTGA |
Gene | >OphauB2|7230 ATGGCCGCCTCTTCCTCGGCCGACGACGCGCAATGGTCGCCCACGACGCCTGTGAGTCCAAAGACGCTGCGGCCC AACGCTCCGGTGAAGGAGAAACGACCCCAGGGGGTTGACGAGACGCATCCGACCATTCCGTCGCCGCGCAGTGCC GACTCTCCCGTCAGCATCCTGGCCACAAAGGCGCTCGACTTTATCGCAACTGCCACGCCGCTATCGCTGCTCGGA CTCGCTGTTGCCTTTTCGGCCGTCACCTATGCAATACTGGGAAGACTGGGCCTGCTCATTATTGGGGCGGTTGGA GGAGTCGTGGCCTTTGTCTCCCTCGAGGCTCGCAATCCGCAAATAGCCCGGGCTGTCAGCAGAGAAAAGGGGACC AAGGTCTTGGACAGAGTCTGGCTTGATGTGCAAAACACGAGACGGATTGCAGAGGCAGGCCCCGACGACGAGCAC TTAGCCATCAAGGTCTTGGACGATTTGCGCCCCGAAACTCGCGATGCGCTGGGCGGGCTGGTGGACGCCGTCATC CGAGACTACGTCAAGTGGTGGTACAGCCCCATCATACCGACGGACCACTCGTTCCCCCTGGCCTGCCGCAAGACG CTCAACTCGTACTTGCTGGCAGTGGCCAATCGCCTGTCGCGAAAACGGCCCGCCGATGCCTTTCTCGACCTACTG ACCAATTGCTCCTCCATCATTATTGTCGTCATGTCGGAGCTGGCGGCCGCTTTTGCCGATTTGCCTCCCGAGTCC AACATGACTGCTGCCGACGCTGTCTACAACTATCTGGCCTCGAACCCCGACTCGCGGCTGGCCAACCTTCTCAAC CAGCGGCAACAGGCTGCCAAGTTTAAAATGGTTGCCGAGGACCTGCTGAGCTTCCTGGACCAAAACACACAAAAC TGCGACGCGGCGCGTGTCTTTTTGCGCGAGATTGTTGCAAACTCGATACTCGAGACCACACTTCAAACATGTAGC AAGGCGGAGTGGATCAATGGGTGGATTGTTTACCTGCTCGAGGCTGGAGAGCCGGACCTGAACCAGGCCATTGAC GTGGGCATGCAGACTGCTCGCGACTCGGGCAGCAACGTCTTTGCCGACATTGACGGCAATGTGGGCAACATTGGC ATCGCCAAGCCCAGCCGCCCCAGCGCCGAGTCGGACCACAGTCGGCGCAAAGAGTCGCTGGGCCACAAGAGACGA CTCAGCAAGGCCGACGAGAAGATGGAGGAGGCGGTGACGACTGTTGGCGAAGCAAAGCCCGAGGCGCGCAAAAGG AAGCCGAGGGTTGGAGAGCTGGACCTCTCTCACAGCAGCGGGACAGGCAGTGCAAAAGCTCTGGGCGGCTCAGAT CACAGCCTGGCGCCGTCGTGGCAGTCGGACAAGTCTTTGGCGGCGGACAATTTGCCGCTGACGCCGCGGTCTGCC ATGGACTCGTCGAGCCAGAGCTCGTCGCCACAAAGAACAAGCGGCAGCCAGGCATTCACCAAGTTTGAGCAGATT GTTCCCGAGGGTCAAGGCGACGAGGAAGCGCCCAGCAAGCAGCTGCTGACTCTGCACAATGCCACCTTTACCCTG CACGACGAGGCCACGGGCGACGGCTCCAAGGTGCGCAGCAAGCCGACGTGGGACTATTTGATACAGGTGGAGCCG GCGTGCGAGTCGCACTCGGGGTGGATGATTGTACGGCGGTACTCAGACTTTGAAACGCTGCACGAGATTGTGCGA CGCATCGCCACGATTTCGGGGGCCACGGCCTTTACCGAGACGCACAAGGAGCTGCCCAAGTGGAAGATGCACAGC AGAGAGTCGCTGCGGGGCGAGCTGGAGCGCTATCTGCGCGACGCCTGCTGGTATGCGTCGCTGGCGGAAAGCGAA GGCATGAAGCGCTTCCTGGAGAAGTCGCAGGGCCACACACACAGCAACTCCAACTCCAAGTCGTTTGGCTGGGAC TCGGTGGGCAAGAACATGCTCGACGTGCTGAGCACAGCCCCCAAGGGCGCCGTGGAGGGCGGGCGGACGCTGGTG GGCGGCGTCTTGGGCAACTTTGCCGGGCTGGCCAAGAAGCCGGCCGCGGGCTCGCTCGACATGACGCCAAGCTCG GGCCGTTTGTCCATTTCTGGCGCCAGCATCAAGTCGCCGGCCAAGTCTGAGCGCACCAGCCTCGACAGCCAGCGG TCGTCCATTATCTCGACGCAGCCGGCCAAGATGCCGCCCATGGAGCGCCAGCCCAGCTTCCAGCTTGCGCAGAGC GAAGCTGAGGCCGACTTGAGCCGCTCGGGCCGGCTGGAGCGCGCAGAGACGTGGTCGGCGTCGCCCAGTGCGCTG CCGAGTCGCGAGCACAGCCGCACGTCGAGCCTGGCGCCTCTGCGGTCGCCCTCGGCCGTCAGCCTCGACCTCTTG AAGCTGCCGCCGCCGCCGGACCAAATGGCGGACGACTACAGCGTGCCAGGCGACGCGCCGCGGCCCAAGACTTCA GACGGCGGCTCGCTTCACCATGAGCGCCATGGCAGCGGCCAGCAGCCGAGCAAGAAGACGCCTGCCACCAGGCCC AGCAAGCAGTATGCGCAGCTGTCTGAGAATGAGACGCGCGTGGCGGTTGAGCTTCTCTTTGCCATCATCAACGAA ATGTACACCCTCTCGTCGGCCTGGAACATTCGCCGCACTCTGCTCACGGCCGCCAAGTCGTTTTTGCTGCGCCCG GGCAACCCCTCGCTGCTGACGGTGCAGGCGCTCATTCAAAAGTCGCTCCTCGACGCCAACACGGCCGACGCCGGC ATTGCCGCCTCGCTGCGCAAACTCCGCCAAAACTCTTTGCCCACGGACGAGGAGCTGGCCGCGTGGCCGCCTGGG CTGTCGGCCGACGACAAGGAAAGGCTGGCAGTCAAGGCGCGCAAGCTGCTGATTCAGAGCGGCGTGCCGGCGGCG CTCATGGGCGTCATGGGGCAGGCGGCAACCGGCGAGGCTCTGGGCCGGGTGTTTGACTGTTTGCAGATTGAAGAG GTGGCGCGAGGCTTGCTGTTTGGGCTCATTTTGCAGGCGGTGAGGATAGTGACGCATTGA |