Protein ID | OphauB2|7182 |
Gene name | |
Location | Contig_73:32578..34469 |
Strand | + |
Gene length (bp) | 1891 |
Transcript length (bp) | 1833 |
Coding sequence length (bp) | 1833 |
Protein length (aa) | 611 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10453 | NUFIP1 | Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) | 4.5E-06 | 336 | 357 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|7182 MSSYGYAPPPPPPPTGGVYAQPTVAFGHHGPPRSGATSGSRGRGGQYPRGRADYRAATGPPTHGYDYAQQYAPPH GAPYQSHPSTVAYQPHHSQSWAGDHASMSHHPNAHSSHAPAPISPSNYHPNYAPPSFASQYPQQTSYDTHFTNPY NSPPPHWPSQGPPQHGHFVASRGRGGYGDRGGSKLPTHTYDREQAAMVGAFGQPYSPLPGSRTTHYPHAQYSFVG PSMSAPGSRHEGRHSYFQRRGRGGPRDSFRGRGSHNHGGDRSRNQPTHSKQESKIKAESPSVGKKKKRRTNTLGL TPGMESETEDDEGEEKALLELIGSEALRVTDMTTFLAERRKNYPTKARVEAKKAAELAQLDKEKAELLEKQADRL RKQLRKVESSIKRKRDQGDEGDEMRESSQDQSDEDMPEVLSSRSEAAASLSQPKAKRADVTRHCKYFSTGGTCGK KGKCRFVHDVQERERAIKERQANDGRMTIQQRLILNDKEQEDLTILQSIQYLREKGVMGPSANPSVSNDDKGDPM DGVVKEEKQTPRKAASGLSLLPAAPASLPEPPIRKEAGLSRRIPSQSVLPRANSVGRQGSEHCQSWLLKPYGSSN GTQSLSDDLP* |
Coding | >OphauB2|7182 ATGTCAAGCTACGGTTACGCACCGCCGCCGCCGCCGCCGCCCACAGGTGGCGTCTATGCTCAACCGACTGTCGCG TTTGGCCATCATGGCCCTCCTCGAAGTGGAGCAACGTCTGGCTCGCGTGGCCGCGGAGGGCAGTATCCTCGTGGT CGGGCTGATTATCGCGCTGCTACGGGTCCCCCGACACATGGCTATGACTACGCTCAGCAGTATGCACCACCCCAT GGCGCGCCCTACCAGTCGCATCCCTCAACAGTGGCCTACCAGCCTCATCATTCCCAGTCTTGGGCCGGGGATCAT GCTTCCATGTCTCATCATCCCAACGCCCATTCTTCACATGCGCCTGCTCCCATCTCTCCGTCCAACTATCACCCA AACTACGCTCCTCCTTCGTTTGCTTCCCAGTATCCGCAGCAGACCTCCTACGATACTCACTTTACAAACCCGTAT AACTCCCCTCCGCCACATTGGCCTTCGCAAGGTCCACCTCAGCATGGTCATTTTGTCGCTAGCAGAGGTCGAGGA GGCTACGGAGACCGAGGTGGCTCCAAGCTTCCTACTCATACCTATGACCGTGAGCAAGCAGCCATGGTTGGTGCG TTTGGTCAGCCTTATTCTCCTCTCCCGGGTTCTCGTACCACTCACTACCCTCATGCCCAATATTCATTTGTTGGA CCCTCCATGTCTGCACCTGGTTCCCGTCACGAGGGTCGCCATAGTTACTTTCAGCGCCGTGGCCGTGGTGGGCCT CGCGATAGCTTTCGCGGACGTGGCAGTCATAATCATGGCGGGGATAGATCGCGCAATCAGCCAACCCATTCCAAG CAGGAGTCTAAAATAAAGGCTGAGTCTCCTTCTGTTGGCAAAAAGAAGAAGCGCAGGACCAATACTCTTGGGCTT ACACCTGGCATGGAATCGGAAACCGAGGACGATGAAGGAGAAGAGAAAGCTCTGCTTGAACTGATAGGCTCTGAA GCCTTGCGTGTTACCGACATGACTACTTTCTTGGCCGAGCGGCGCAAGAATTACCCCACCAAGGCGCGTGTCGAA GCCAAAAAGGCTGCCGAGCTGGCACAGTTGGACAAGGAAAAGGCCGAATTGCTCGAAAAGCAAGCCGATAGGTTG CGCAAGCAGCTCCGCAAAGTTGAGTCATCGATCAAGCGAAAGCGAGATCAGGGAGATGAAGGGGACGAGATGCGA GAGTCTTCACAAGATCAGTCCGATGAAGACATGCCCGAAGTCTTATCTTCTCGTAGCGAGGCCGCCGCGTCCCTT TCTCAACCCAAGGCCAAGAGGGCCGATGTAACGAGGCATTGCAAGTATTTCTCTACTGGAGGAACTTGCGGCAAA AAGGGCAAGTGCCGCTTCGTGCATGACGTGCAAGAGAGAGAGAGGGCTATCAAGGAGCGCCAGGCAAACGACGGC CGCATGACGATACAGCAACGTCTGATTCTCAACGACAAGGAACAAGAGGACTTGACAATTCTTCAATCCATTCAA TACCTGCGCGAGAAGGGCGTCATGGGGCCGTCGGCAAATCCTTCTGTCAGCAACGATGACAAAGGTGATCCTATG GATGGCGTGGTCAAGGAGGAGAAGCAGACACCTAGGAAGGCAGCTTCTGGACTGAGTCTATTACCAGCTGCACCC GCATCTCTTCCCGAGCCGCCTATCAGGAAAGAGGCTGGTTTGTCGCGCAGAATCCCTTCGCAATCCGTTCTCCCG CGGGCCAATAGTGTGGGCCGCCAGGGTTCGGAACACTGTCAAAGCTGGCTGCTCAAGCCATACGGAAGCTCCAAC GGCACACAGTCTCTAAGCGATGACTTGCCATAG |
Transcript | >OphauB2|7182 ATGTCAAGCTACGGTTACGCACCGCCGCCGCCGCCGCCGCCCACAGGTGGCGTCTATGCTCAACCGACTGTCGCG TTTGGCCATCATGGCCCTCCTCGAAGTGGAGCAACGTCTGGCTCGCGTGGCCGCGGAGGGCAGTATCCTCGTGGT CGGGCTGATTATCGCGCTGCTACGGGTCCCCCGACACATGGCTATGACTACGCTCAGCAGTATGCACCACCCCAT GGCGCGCCCTACCAGTCGCATCCCTCAACAGTGGCCTACCAGCCTCATCATTCCCAGTCTTGGGCCGGGGATCAT GCTTCCATGTCTCATCATCCCAACGCCCATTCTTCACATGCGCCTGCTCCCATCTCTCCGTCCAACTATCACCCA AACTACGCTCCTCCTTCGTTTGCTTCCCAGTATCCGCAGCAGACCTCCTACGATACTCACTTTACAAACCCGTAT AACTCCCCTCCGCCACATTGGCCTTCGCAAGGTCCACCTCAGCATGGTCATTTTGTCGCTAGCAGAGGTCGAGGA GGCTACGGAGACCGAGGTGGCTCCAAGCTTCCTACTCATACCTATGACCGTGAGCAAGCAGCCATGGTTGGTGCG TTTGGTCAGCCTTATTCTCCTCTCCCGGGTTCTCGTACCACTCACTACCCTCATGCCCAATATTCATTTGTTGGA CCCTCCATGTCTGCACCTGGTTCCCGTCACGAGGGTCGCCATAGTTACTTTCAGCGCCGTGGCCGTGGTGGGCCT CGCGATAGCTTTCGCGGACGTGGCAGTCATAATCATGGCGGGGATAGATCGCGCAATCAGCCAACCCATTCCAAG CAGGAGTCTAAAATAAAGGCTGAGTCTCCTTCTGTTGGCAAAAAGAAGAAGCGCAGGACCAATACTCTTGGGCTT ACACCTGGCATGGAATCGGAAACCGAGGACGATGAAGGAGAAGAGAAAGCTCTGCTTGAACTGATAGGCTCTGAA GCCTTGCGTGTTACCGACATGACTACTTTCTTGGCCGAGCGGCGCAAGAATTACCCCACCAAGGCGCGTGTCGAA GCCAAAAAGGCTGCCGAGCTGGCACAGTTGGACAAGGAAAAGGCCGAATTGCTCGAAAAGCAAGCCGATAGGTTG CGCAAGCAGCTCCGCAAAGTTGAGTCATCGATCAAGCGAAAGCGAGATCAGGGAGATGAAGGGGACGAGATGCGA GAGTCTTCACAAGATCAGTCCGATGAAGACATGCCCGAAGTCTTATCTTCTCGTAGCGAGGCCGCCGCGTCCCTT TCTCAACCCAAGGCCAAGAGGGCCGATGTAACGAGGCATTGCAAGTATTTCTCTACTGGAGGAACTTGCGGCAAA AAGGGCAAGTGCCGCTTCGTGCATGACGTGCAAGAGAGAGAGAGGGCTATCAAGGAGCGCCAGGCAAACGACGGC CGCATGACGATACAGCAACGTCTGATTCTCAACGACAAGGAACAAGAGGACTTGACAATTCTTCAATCCATTCAA TACCTGCGCGAGAAGGGCGTCATGGGGCCGTCGGCAAATCCTTCTGTCAGCAACGATGACAAAGGTGATCCTATG GATGGCGTGGTCAAGGAGGAGAAGCAGACACCTAGGAAGGCAGCTTCTGGACTGAGTCTATTACCAGCTGCACCC GCATCTCTTCCCGAGCCGCCTATCAGGAAAGAGGCTGGTTTGTCGCGCAGAATCCCTTCGCAATCCGTTCTCCCG CGGGCCAATAGTGTGGGCCGCCAGGGTTCGGAACACTGTCAAAGCTGGCTGCTCAAGCCATACGGAAGCTCCAAC GGCACACAGTCTCTAAGCGATGACTTGCCATAG |
Gene | >OphauB2|7182 ATGTCAAGCTACGGTTACGCACCGCCGCCGCCGCCGCCGCCCACAGGTGGCGTCTATGCTCAACCGACTGTCGCG TTTGGCCATCATGGCCCTCCTCGAAGTGGAGCAACGTCTGGCTCGCGTGGCCGCGGAGGGCAGTATCCTCGTGGT CGGGCTGATTATCGCGCTGCTACGGGTCCCCCGACACATGGCTATGACTACGCTCAGCAGTATGCACCACCCCAT GGCGCGCCCTACCAGTCGCATCCCTCAACAGTGGCCTACCAGCCTCATCATTCCCAGTCTTGGGCCGGGGATCAT GCTTCCATGTCTCATCATCCCAACGCCCATTCTTCACATGCGCCTGCTCCCATCTCTCCGTCCAACTATCACCCA AACTACGCTCCTCCTTCGTTTGCTTCCCAGTATCCGCAGCAGACCTCCTACGATACTCACTTTACAAACCCGTAT AACTCCCCTCCGCCACATTGGCCTTCGCAAGGTCCACCTCAGCATGGTCATTTTGTCGCTAGCAGAGGTCGAGGA GGCTACGGAGACCGAGGTGGCTCCAAGCTTCCTACTCATACCTATGACCGTGAGCAAGCAGCCATGGTTGGTGCG TTTGGTCAGCCTTATTCTCCTCTCCCGGGTTCTCGTACCACTCACTACCCTCATGCCCAATATTCATTTGTTGGA CCCTCCATGTCTGCACCTGGTTCCCGTCACGAGGGTCGCCATAGTTACTTTCAGCGCCGTGGCCGTGGTGGGCCT CGCGATAGCTTTCGCGGACGTGGCAGTCATAATCATGGCGGGGATAGATCGCGCAATCAGCCAACCCATTCCAAG CAGGAGTCTAAAATAAAGGCTGAGTCTCCTTCTGTTGGCAAAAAGAAGAAGCGCAGGACCAATACTCTTGGGCTT ACACCTGGCATGGAATCGGAAACCGAGGACGATGAAGGAGAAGAGAAAGCTCTGCTTGAACTGATAGGCTCTGAA GCCTTGCGGTAAGTTCCTTTATTGCAACCAATGCATTCCCTCCTTATTGACATGTTCAAAACTTAGTGTTACCGA CATGACTACTTTCTTGGCCGAGCGGCGCAAGAATTACCCCACCAAGGCGCGTGTCGAAGCCAAAAAGGCTGCCGA GCTGGCACAGTTGGACAAGGAAAAGGCCGAATTGCTCGAAAAGCAAGCCGATAGGTTGCGCAAGCAGCTCCGCAA AGTTGAGTCATCGATCAAGCGAAAGCGAGATCAGGGAGATGAAGGGGACGAGATGCGAGAGTCTTCACAAGATCA GTCCGATGAAGACATGCCCGAAGTCTTATCTTCTCGTAGCGAGGCCGCCGCGTCCCTTTCTCAACCCAAGGCCAA GAGGGCCGATGTAACGAGGCATTGCAAGTATTTCTCTACTGGAGGAACTTGCGGCAAAAAGGGCAAGTGCCGCTT CGTGCATGACGTGCAAGAGAGAGAGAGGGCTATCAAGGAGCGCCAGGCAAACGACGGCCGCATGACGATACAGCA ACGTCTGATTCTCAACGACAAGGAACAAGAGGACTTGACAATTCTTCAATCCATTCAATACCTGCGCGAGAAGGG CGTCATGGGGCCGTCGGCAAATCCTTCTGTCAGCAACGATGACAAAGGTGATCCTATGGATGGCGTGGTCAAGGA GGAGAAGCAGACACCTAGGAAGGCAGCTTCTGGACTGAGTCTATTACCAGCTGCACCCGCATCTCTTCCCGAGCC GCCTATCAGGAAAGAGGCTGGTTTGTCGCGCAGAATCCCTTCGCAATCCGTTCTCCCGCGGGCCAATAGTGTGGG CCGCCAGGGTTCGGAACACTGTCAAAGCTGGCTGCTCAAGCCATACGGAAGCTCCAACGGCACACAGTCTCTAAG CGATGACTTGCCATAG |