© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7174 |
| Gene name | |
| Location | Contig_73:21329..22020 |
| Strand | + |
| Gene length (bp) | 691 |
| Transcript length (bp) | 594 |
| Coding sequence length (bp) | 594 |
| Protein length (aa) | 198 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00501 | AMP-binding | AMP-binding enzyme | 2.1E-17 | 29 | 186 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P41636|4CL_PINTA | 4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1 | 19 | 186 | 7.0E-08 |
| sp|P14912|4CL1_PETCR | 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1 | 3 | 186 | 2.0E-07 |
| sp|Q8VCW8|ACSF2_MOUSE | Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus GN=Acsf2 PE=1 SV=1 | 21 | 122 | 7.0E-07 |
| sp|Q499N5|ACSF2_RAT | Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1 | 21 | 122 | 1.0E-06 |
| sp|P27206|SRFAA_BACSU | Surfactin synthase subunit 1 OS=Bacillus subtilis (strain 168) GN=srfAA PE=1 SV=4 | 11 | 157 | 2.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P41636|4CL_PINTA | 4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1 | 19 | 186 | 7.0E-08 |
| sp|P14912|4CL1_PETCR | 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1 | 3 | 186 | 2.0E-07 |
| sp|Q8VCW8|ACSF2_MOUSE | Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus GN=Acsf2 PE=1 SV=1 | 21 | 122 | 7.0E-07 |
| sp|Q499N5|ACSF2_RAT | Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1 | 21 | 122 | 1.0E-06 |
| sp|P27206|SRFAA_BACSU | Surfactin synthase subunit 1 OS=Bacillus subtilis (strain 168) GN=srfAA PE=1 SV=4 | 11 | 157 | 2.0E-06 |
| sp|Q9R9J1|MYCA_BACIU | Mycosubtilin synthase subunit A OS=Bacillus subtilis GN=mycA PE=3 SV=1 | 10 | 188 | 2.0E-06 |
| sp|Q336M7|4CLL2_ORYSJ | 4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=3 SV=3 | 46 | 127 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7174 MPLKSCWANVPIPKTDVWTFCMESPRDFPDEHRLLIDGEKPENGYNSAELRQLSSSLGRGLLHRFSWTKGDRLAL YTPNSIDIPVVILAGLWAGIVIAPVSPDYKVDELAQQLRDSQAKGLVTQPSHLNLACEAARKAGLKREDVFLLGY DREDGFHHWRDLMMDGDDARPRIDPAEDVALLMYSSVSKMSLPMSII* |
| Coding | >OphauB2|7174 ATGCCACTCAAGTCGTGCTGGGCCAATGTCCCGATTCCAAAGACTGATGTATGGACCTTTTGTATGGAAAGTCCA CGAGACTTTCCTGATGAGCATCGCCTTCTAATTGACGGCGAGAAACCCGAAAATGGATACAATTCTGCGGAGCTA CGCCAGCTCTCATCCTCATTGGGTCGCGGCCTCCTTCATCGCTTCTCCTGGACCAAGGGCGACAGACTTGCCTTG TACACCCCAAACAGCATCGACATACCAGTCGTAATACTGGCGGGCCTGTGGGCGGGCATCGTGATTGCCCCCGTG AGCCCGGATTACAAGGTTGACGAGCTTGCGCAACAGCTGCGTGATAGTCAGGCAAAAGGTCTGGTGACACAGCCG TCGCATTTAAACCTGGCGTGTGAGGCAGCAAGAAAGGCGGGCTTGAAGCGCGAAGACGTGTTTCTGCTCGGCTAC GATCGTGAGGATGGATTTCATCATTGGCGGGATTTAATGATGGATGGCGATGACGCAAGGCCTCGGATCGATCCA GCTGAGGATGTTGCGCTTTTAATGTATAGCTCGGTGAGTAAGATGTCGCTGCCAATGAGTATTATTTAG |
| Transcript | >OphauB2|7174 ATGCCACTCAAGTCGTGCTGGGCCAATGTCCCGATTCCAAAGACTGATGTATGGACCTTTTGTATGGAAAGTCCA CGAGACTTTCCTGATGAGCATCGCCTTCTAATTGACGGCGAGAAACCCGAAAATGGATACAATTCTGCGGAGCTA CGCCAGCTCTCATCCTCATTGGGTCGCGGCCTCCTTCATCGCTTCTCCTGGACCAAGGGCGACAGACTTGCCTTG TACACCCCAAACAGCATCGACATACCAGTCGTAATACTGGCGGGCCTGTGGGCGGGCATCGTGATTGCCCCCGTG AGCCCGGATTACAAGGTTGACGAGCTTGCGCAACAGCTGCGTGATAGTCAGGCAAAAGGTCTGGTGACACAGCCG TCGCATTTAAACCTGGCGTGTGAGGCAGCAAGAAAGGCGGGCTTGAAGCGCGAAGACGTGTTTCTGCTCGGCTAC GATCGTGAGGATGGATTTCATCATTGGCGGGATTTAATGATGGATGGCGATGACGCAAGGCCTCGGATCGATCCA GCTGAGGATGTTGCGCTTTTAATGTATAGCTCGGTGAGTAAGATGTCGCTGCCAATGAGTATTATTTAG |
| Gene | >OphauB2|7174 ATGCCACTCAAGTCGTGCTGGGCCAATGTCCCGATTCCAAAGACTGATGTATGGACCTTTTGTATGGAAAGTCCA CGAGACTTTCCTGATGAGCATCGTAAAGCGTCCTCTTTTTACGAACAACCATCGCTTCAATTCTAATGAGATCGG TACTATTGAACACAAGCGTCAAGCTAATAAGTTTTCAATTTTAGGCCTTCTAATTGACGGCGAGAAACCCGAAAA TGGATACAATTCTGCGGAGCTACGCCAGCTCTCATCCTCATTGGGTCGCGGCCTCCTTCATCGCTTCTCCTGGAC CAAGGGCGACAGACTTGCCTTGTACACCCCAAACAGCATCGACATACCAGTCGTAATACTGGCGGGCCTGTGGGC GGGCATCGTGATTGCCCCCGTGAGCCCGGATTACAAGGTTGACGAGCTTGCGCAACAGCTGCGTGATAGTCAGGC AAAAGGTCTGGTGACACAGCCGTCGCATTTAAACCTGGCGTGTGAGGCAGCAAGAAAGGCGGGCTTGAAGCGCGA AGACGTGTTTCTGCTCGGCTACGATCGTGAGGATGGATTTCATCATTGGCGGGATTTAATGATGGATGGCGATGA CGCAAGGCCTCGGATCGATCCAGCTGAGGATGTTGCGCTTTTAATGTATAGCTCGGTGAGTAAGATGTCGCTGCC AATGAGTATTATTTAG |