Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7168
Gene name
LocationContig_73:3164..4394
Strand-
Gene length (bp)1230
Transcript length (bp)1230
Coding sequence length (bp)1230
Protein length (aa) 410

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase 7.6E-43 4 307
PF00070 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase 8.6E-08 158 232

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P9WJJ0|Y1812_MYCTO NADH dehydrogenase-like protein MT1860 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1860 PE=2 SV=1 3 378 7.0E-64
sp|P9WJJ1|Y1812_MYCTU NADH dehydrogenase-like protein Rv1812c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1812c PE=1 SV=1 3 378 8.0E-64
sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain 168) GN=yumB PE=3 SV=1 4 376 6.0E-24
sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1 SV=2 30 346 1.0E-18
sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3 SV=1 3 377 2.0E-17
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Swissprot ID Swissprot Description Start End E-value
sp|P9WJJ0|Y1812_MYCTO NADH dehydrogenase-like protein MT1860 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1860 PE=2 SV=1 3 378 7.0E-64
sp|P9WJJ1|Y1812_MYCTU NADH dehydrogenase-like protein Rv1812c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1812c PE=1 SV=1 3 378 8.0E-64
sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain 168) GN=yumB PE=3 SV=1 4 376 6.0E-24
sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1 SV=2 30 346 1.0E-18
sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3 SV=1 3 377 2.0E-17
sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1 3 377 5.0E-17
sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain 168) GN=yjlD PE=1 SV=3 1 346 7.0E-17
sp|Q8GXR9|DHNA_ARATH Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDC1 PE=1 SV=2 4 351 1.0E-16
sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus (strain N315) GN=SA0802 PE=1 SV=1 3 342 2.0E-16
sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1 3 342 2.0E-16
sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=1 SV=1 3 342 2.0E-16
sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0903 PE=3 SV=1 3 342 2.0E-16
sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0941 PE=3 SV=1 3 342 2.0E-16
sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus (strain MSSA476) GN=SAS0811 PE=3 SV=1 3 342 2.0E-16
sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus (strain MW2) GN=MW0823 PE=3 SV=1 3 342 2.0E-16
sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1 3 342 2.0E-16
sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1834 PE=3 SV=1 3 377 2.0E-16
sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus (strain COL) GN=SACOL0944 PE=3 SV=1 3 342 2.0E-16
sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum GN=DDB_G0270104 PE=3 SV=2 2 309 8.0E-16
sp|P44856|DHNA_HAEIN NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1 30 330 1.0E-15
sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1 3 377 2.0E-14
sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain 168) GN=yutJ PE=3 SV=2 3 344 2.0E-11
sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3A11.07 PE=3 SV=1 5 299 8.0E-11
sp|Q7MFY7|NORW_VIBVY Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus (strain YJ016) GN=norW PE=3 SV=1 1 288 2.0E-08
sp|Q58065|NAOX_METJA Putative NADH oxidase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0649 PE=3 SV=2 4 340 3.0E-08
sp|P9WHH5|STHA_MYCTU Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=sthA PE=1 SV=1 97 307 1.0E-07
sp|P9WHH4|STHA_MYCTO Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=sthA PE=3 SV=1 97 307 1.0E-07
sp|A5U665|STHA_MYCTA Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3 SV=1 97 307 1.0E-07
sp|C1AFH2|STHA_MYCBT Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA PE=3 SV=1 97 307 1.0E-07
sp|A1KM51|STHA_MYCBP Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1 97 307 1.0E-07
sp|P66007|STHA_MYCBO Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=sthA PE=3 SV=1 97 307 1.0E-07
sp|Q8D4F7|NORW_VIBVU Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus (strain CMCP6) GN=norW PE=3 SV=1 1 288 1.0E-07
sp|Q94BV7|NDB2_ARATH External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial OS=Arabidopsis thaliana GN=NDB2 PE=1 SV=1 4 288 4.0E-07
sp|O43090|NDH2_SCHPO Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.15c PE=3 SV=1 5 299 5.0E-07
sp|P43494|THCD_RHOER Rhodocoxin reductase OS=Rhodococcus erythropolis GN=thcD PE=1 SV=2 5 307 2.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7168
MSSKVVIIGAGFAGVWSALSARRLINLQNKQGSVQVVVVAPEPTLVMRPRLYEEDPATKTQNLTCLFHHAGIHFI
QGTVESIHTETQTLDVQGLSGDKSVIDYDRLVLAAGSNLVRPSKIAGLQQHVFDIDSIESASKLEEHLKSLSSLP
PSTARDTLVICGAGFTGIELAAELPRRFKSLRIILVEAADSIGPELGPGPRPAITAALEALRIQVKLGSAVASVD
ATGVTLVSGERIKSMTVVWTAGVRATPLTQQIPGTRDSLNRLQVDGNLRNPSSPHVFATGDAACAVAHPSGQTAL
MSCQHAIVLGLASGHNAAADLVGVPLFPYSHVAYSCCLDLGSCGAVIARGYDRKEILLTGLDAKKVKSYINQKLI
YPPTIAEEAIVAADPDCPDSDELFAMLIKEVGVY*
Coding >OphauB2|7168
ATGTCTTCCAAAGTCGTCATCATCGGCGCTGGGTTCGCCGGCGTCTGGAGCGCCCTCTCGGCTCGACGCCTCATC
AACCTCCAAAACAAACAAGGCAGTGTCCAAGTTGTAGTCGTCGCACCTGAGCCGACCCTCGTTATGCGCCCGAGG
CTCTACGAGGAGGACCCGGCAACAAAGACGCAAAATCTAACATGCTTATTTCACCATGCTGGCATCCACTTCATC
CAAGGCACCGTCGAATCTATTCATACTGAAACGCAGACACTAGACGTTCAAGGACTGTCTGGTGACAAGTCCGTC
ATCGATTACGACAGACTTGTCCTTGCAGCTGGAAGTAACCTTGTCCGGCCTTCAAAGATCGCTGGTCTCCAGCAG
CATGTCTTTGACATTGACAGCATCGAATCTGCTTCCAAGCTGGAGGAGCACCTCAAGAGCCTCAGCTCGCTCCCT
CCAAGTACGGCCCGCGATACTCTAGTTATCTGCGGGGCAGGCTTCACCGGCATCGAACTTGCTGCGGAGCTGCCT
AGGCGATTTAAAAGCCTGCGCATTATCCTCGTCGAGGCCGCAGACAGCATCGGCCCAGAGCTTGGCCCTGGTCCG
AGACCTGCCATCACGGCTGCTCTAGAGGCTCTCCGCATCCAGGTCAAGTTGGGCTCTGCAGTCGCCTCGGTTGAT
GCCACTGGCGTCACCCTGGTGTCTGGCGAGCGCATCAAGTCCATGACCGTTGTATGGACAGCCGGTGTGCGCGCC
ACGCCTTTAACACAGCAAATTCCAGGGACCAGGGATAGCCTAAACCGCCTTCAAGTCGACGGAAACCTCCGCAAC
CCATCGAGCCCCCATGTCTTCGCTACAGGAGATGCTGCCTGTGCCGTTGCGCATCCGAGCGGCCAGACTGCGCTC
ATGAGCTGCCAGCACGCCATTGTCTTGGGTCTCGCCTCGGGCCACAACGCAGCAGCGGACCTCGTTGGCGTGCCT
CTGTTCCCTTATAGCCATGTTGCGTATAGCTGCTGTCTCGACTTGGGAAGTTGTGGTGCAGTCATCGCGAGGGGC
TATGACAGGAAAGAGATTCTGCTTACTGGCCTCGACGCCAAAAAGGTCAAGTCGTACATCAACCAGAAGCTAATC
TACCCACCGACTATTGCCGAGGAAGCCATTGTAGCCGCAGACCCCGACTGTCCCGATTCGGATGAGCTGTTTGCG
ATGCTAATAAAGGAAGTAGGGGTATATTGA
Transcript >OphauB2|7168
ATGTCTTCCAAAGTCGTCATCATCGGCGCTGGGTTCGCCGGCGTCTGGAGCGCCCTCTCGGCTCGACGCCTCATC
AACCTCCAAAACAAACAAGGCAGTGTCCAAGTTGTAGTCGTCGCACCTGAGCCGACCCTCGTTATGCGCCCGAGG
CTCTACGAGGAGGACCCGGCAACAAAGACGCAAAATCTAACATGCTTATTTCACCATGCTGGCATCCACTTCATC
CAAGGCACCGTCGAATCTATTCATACTGAAACGCAGACACTAGACGTTCAAGGACTGTCTGGTGACAAGTCCGTC
ATCGATTACGACAGACTTGTCCTTGCAGCTGGAAGTAACCTTGTCCGGCCTTCAAAGATCGCTGGTCTCCAGCAG
CATGTCTTTGACATTGACAGCATCGAATCTGCTTCCAAGCTGGAGGAGCACCTCAAGAGCCTCAGCTCGCTCCCT
CCAAGTACGGCCCGCGATACTCTAGTTATCTGCGGGGCAGGCTTCACCGGCATCGAACTTGCTGCGGAGCTGCCT
AGGCGATTTAAAAGCCTGCGCATTATCCTCGTCGAGGCCGCAGACAGCATCGGCCCAGAGCTTGGCCCTGGTCCG
AGACCTGCCATCACGGCTGCTCTAGAGGCTCTCCGCATCCAGGTCAAGTTGGGCTCTGCAGTCGCCTCGGTTGAT
GCCACTGGCGTCACCCTGGTGTCTGGCGAGCGCATCAAGTCCATGACCGTTGTATGGACAGCCGGTGTGCGCGCC
ACGCCTTTAACACAGCAAATTCCAGGGACCAGGGATAGCCTAAACCGCCTTCAAGTCGACGGAAACCTCCGCAAC
CCATCGAGCCCCCATGTCTTCGCTACAGGAGATGCTGCCTGTGCCGTTGCGCATCCGAGCGGCCAGACTGCGCTC
ATGAGCTGCCAGCACGCCATTGTCTTGGGTCTCGCCTCGGGCCACAACGCAGCAGCGGACCTCGTTGGCGTGCCT
CTGTTCCCTTATAGCCATGTTGCGTATAGCTGCTGTCTCGACTTGGGAAGTTGTGGTGCAGTCATCGCGAGGGGC
TATGACAGGAAAGAGATTCTGCTTACTGGCCTCGACGCCAAAAAGGTCAAGTCGTACATCAACCAGAAGCTAATC
TACCCACCGACTATTGCCGAGGAAGCCATTGTAGCCGCAGACCCCGACTGTCCCGATTCGGATGAGCTGTTTGCG
ATGCTAATAAAGGAAGTAGGGGTATATTGA
Gene >OphauB2|7168
ATGTCTTCCAAAGTCGTCATCATCGGCGCTGGGTTCGCCGGCGTCTGGAGCGCCCTCTCGGCTCGACGCCTCATC
AACCTCCAAAACAAACAAGGCAGTGTCCAAGTTGTAGTCGTCGCACCTGAGCCGACCCTCGTTATGCGCCCGAGG
CTCTACGAGGAGGACCCGGCAACAAAGACGCAAAATCTAACATGCTTATTTCACCATGCTGGCATCCACTTCATC
CAAGGCACCGTCGAATCTATTCATACTGAAACGCAGACACTAGACGTTCAAGGACTGTCTGGTGACAAGTCCGTC
ATCGATTACGACAGACTTGTCCTTGCAGCTGGAAGTAACCTTGTCCGGCCTTCAAAGATCGCTGGTCTCCAGCAG
CATGTCTTTGACATTGACAGCATCGAATCTGCTTCCAAGCTGGAGGAGCACCTCAAGAGCCTCAGCTCGCTCCCT
CCAAGTACGGCCCGCGATACTCTAGTTATCTGCGGGGCAGGCTTCACCGGCATCGAACTTGCTGCGGAGCTGCCT
AGGCGATTTAAAAGCCTGCGCATTATCCTCGTCGAGGCCGCAGACAGCATCGGCCCAGAGCTTGGCCCTGGTCCG
AGACCTGCCATCACGGCTGCTCTAGAGGCTCTCCGCATCCAGGTCAAGTTGGGCTCTGCAGTCGCCTCGGTTGAT
GCCACTGGCGTCACCCTGGTGTCTGGCGAGCGCATCAAGTCCATGACCGTTGTATGGACAGCCGGTGTGCGCGCC
ACGCCTTTAACACAGCAAATTCCAGGGACCAGGGATAGCCTAAACCGCCTTCAAGTCGACGGAAACCTCCGCAAC
CCATCGAGCCCCCATGTCTTCGCTACAGGAGATGCTGCCTGTGCCGTTGCGCATCCGAGCGGCCAGACTGCGCTC
ATGAGCTGCCAGCACGCCATTGTCTTGGGTCTCGCCTCGGGCCACAACGCAGCAGCGGACCTCGTTGGCGTGCCT
CTGTTCCCTTATAGCCATGTTGCGTATAGCTGCTGTCTCGACTTGGGAAGTTGTGGTGCAGTCATCGCGAGGGGC
TATGACAGGAAAGAGATTCTGCTTACTGGCCTCGACGCCAAAAAGGTCAAGTCGTACATCAACCAGAAGCTAATC
TACCCACCGACTATTGCCGAGGAAGCCATTGTAGCCGCAGACCCCGACTGTCCCGATTCGGATGAGCTGTTTGCG
ATGCTAATAAAGGAAGTAGGGGTATATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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