Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7120
Gene name
LocationContig_71:77348..77933
Strand-
Gene length (bp)585
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04828 GFA Glutathione-dependent formaldehyde-activating enzyme 9.5E-25 28 116

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O14034|YEMD_SCHPO Uncharacterized lyase C29B12.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B12.13 PE=3 SV=1 5 111 2.0E-06

GO

GO Term Description Terminal node
GO:0016846 carbon-sulfur lyase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016829 lyase activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup446
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3428
Ophiocordyceps australis map64 (Brazil) OphauB2|7120 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|02991
Ophiocordyceps camponoti-floridani Ophcf2|05475
Ophiocordyceps camponoti-rufipedis Ophun1|3452
Ophiocordyceps camponoti-rufipedis Ophun1|5332
Ophiocordyceps kimflemingae Ophio5|2435
Ophiocordyceps kimflemingae Ophio5|7341
Ophiocordyceps subramaniannii Hirsu2|7957

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7120
MPLTGHCLCKAVTYKADVEAPIITGYDHCDDCQRQCGSTYSLVAVVPKEKLTINGPIKKWSGTGSSGKAVHRLFC
SECGSPIAHDPDAAPEIIALKAGTLDSEIKKNLKPDTEIWTVGKLPFCQEKLAKPFSHMPE*
Coding >OphauB2|7120
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACAAGGCCGACGTTGAAGCTCCCATCATTACGGGC
TACGACCACTGCGACGACTGCCAACGCCAATGCGGCTCAACCTACTCCCTCGTTGCCGTCGTACCCAAGGAGAAG
CTCACCATCAACGGCCCCATCAAGAAGTGGTCTGGCACCGGCTCCTCGGGCAAAGCCGTCCACCGTCTCTTTTGC
TCCGAGTGTGGCTCTCCAATTGCCCACGACCCTGACGCAGCGCCCGAAATCATTGCCCTCAAGGCCGGCACTCTC
GACTCGGAAATCAAGAAGAACCTCAAGCCTGACACTGAAATTTGGACCGTGGGAAAGCTGCCATTTTGCCAGGAG
AAACTGGCCAAACCCTTCTCGCACATGCCTGAATAA
Transcript >OphauB2|7120
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACAAGGCCGACGTTGAAGCTCCCATCATTACGGGC
TACGACCACTGCGACGACTGCCAACGCCAATGCGGCTCAACCTACTCCCTCGTTGCCGTCGTACCCAAGGAGAAG
CTCACCATCAACGGCCCCATCAAGAAGTGGTCTGGCACCGGCTCCTCGGGCAAAGCCGTCCACCGTCTCTTTTGC
TCCGAGTGTGGCTCTCCAATTGCCCACGACCCTGACGCAGCGCCCGAAATCATTGCCCTCAAGGCCGGCACTCTC
GACTCGGAAATCAAGAAGAACCTCAAGCCTGACACTGAAATTTGGACCGTGGGAAAGCTGCCATTTTGCCAGGAG
AAACTGGCCAAACCCTTCTCGCACATGCCTGAATAA
Gene >OphauB2|7120
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACAAGGCCGACGTTGAAGCTCCCATCATTACGGGC
TACGACCACTGCGACGACTGCCAACGCCAATGCGGCTCAACCTACTGTGCGTCTTTCCCATCTCCCTCTGACACG
TATACATGTTCCTCGCAGTCGTGCCAAGTCGGCTAACACGATTGCTCGCCTTGTCCCACAGCCCTCGTTGCCGTC
GTACCCAAGGAGAAGCTCACCATCAACGGCCCCATCAAGAAGTGGTCTGGCACCGGCTCCTCGGGCAAAGCCGTC
CACCGTCTCTTTTGCTCCGAGTGTGGCTCTCCAATTGCCCACGACCCTGACGCAGCGCCCGAAATCATTGCCCTC
AAGGCCGGCACTCTCGACTCGGAAATCAAGAAGAACCTCAAGCCTGTGAGCTTGCTATCCACACCCCCATATTAC
TTGCTATTTTTCGGCACCCTGTGCAGTGGCTGACGCCGATACTTTTGGATACAGGACACTGAAATTTGGACCGTG
GGAAAGCTGCCATTTTGCCAGGAGAAACTGGCCAAACCCTTCTCGCACATGCCTGAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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