Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|7110
Gene name
LocationContig_71:49937..52250
Strand-
Gene length (bp)2313
Transcript length (bp)2247
Coding sequence length (bp)2247
Protein length (aa) 749

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06011 TRP Transient receptor potential (TRP) ion channel 1.8E-163 169 616
PF14558 TRP_N ML-like domain 2.5E-43 28 164

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q08967|FLC1_YEAST Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 9 674 2.0E-143
sp|P39719|FLC2_YEAST Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 23 670 2.0E-143
sp|P53121|FLC3_YEAST Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 9 659 2.0E-138
sp|Q08844|YO365_YEAST Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 22 619 8.0E-108
sp|Q09917|PKD2_SCHPO TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 4 726 1.0E-104
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q08967|FLC1_YEAST Flavin carrier protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC1 PE=1 SV=1 9 674 2.0E-143
sp|P39719|FLC2_YEAST Flavin carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC2 PE=1 SV=2 23 670 2.0E-143
sp|P53121|FLC3_YEAST Putative flavin carrier protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLC3 PE=1 SV=1 9 659 2.0E-138
sp|Q08844|YO365_YEAST Uncharacterized membrane protein YOR365C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR365C PE=1 SV=1 22 619 8.0E-108
sp|Q09917|PKD2_SCHPO TRP-like ion channel pkd2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkd2 PE=1 SV=1 4 726 1.0E-104
sp|O74520|YCPE_SCHPO Uncharacterized membrane protein C663.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.14c PE=3 SV=2 36 554 3.0E-26
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 341 363 22
2 384 406 22
3 416 438 22
4 478 500 22
5 504 526 22
6 539 561 22
7 566 588 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|7110
MRSLFQAPLLLLSSMAALLAPAAGEKLLMSNSLNTCQADSSFTASLFNVVYTPNNSSASVNMVATSSVQGKVLFD
LSISAYGYQFLRRTLNPCDMNLAGLCPMVAGKIPFGFNLPIDKKAASQIPGIAYNIPDLDATVRVFINMSSTGES
IACVEADISNGKTVDLIGVKWATAIIAGLALLSSAIVNGLGHSNTAAHVAANSLSLFGYFQAQAILGLTGVHLPP
IVQSWTQDFQWSMGIIRVGFMQDIFTWYQRATGGTPSTIFDSLTTVSVQVAKRSLEYASDTGLSLFRRGVAMMPK
AAHSLVRRNNITTGSGAYIVFGIQRVAFRSKIETTNLFMTGLTFFCVFVVLTVLAVSAFKGLCELFVRQRWMDKD
KFLEFRNGWLTVLKGILFRVALIGFPQMAILCLWEFTQVDSAAEVVLAVFFFFGLAITLAWGASKVIRIARRSVV
MHRNPAYILFSDPQALNKWGFLYIQFRASAYYFIAPVLGYTLIKAMFIAFGQRSGVAQAIGFVIIEALALIGASV
LRPWMDKSTNSFNIAICVINFINAIFLLIFSNVFGAPTLVVGVVGVVLFILNAAFALILLIMVIVSTTVTFFRKN
PDARYQFMADDRASFMKSQTQLTTTTELDALAATARGDKAGFKSHLDLDDDNESLSSEDLRRRADPHGNNSQNSF
IGGPRSPVNPSMPLFPAGGQRPQSPFRPDSPNAMAYNRSGSSLGQNRAMNNVSPGGYRAQNSSSPWQRGAGYD*
Coding >OphauB2|7110
ATGCGGTCGCTATTCCAGGCACCGCTGCTGCTTCTCTCGTCCATGGCGGCGCTGCTTGCGCCTGCCGCGGGCGAG
AAACTGCTCATGTCCAACTCGCTCAATACCTGCCAGGCCGACTCGAGTTTTACTGCCTCACTCTTCAATGTTGTC
TATACACCCAACAATAGCTCAGCCAGTGTCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTTGAT
CTCTCCATCTCGGCTTATGGCTATCAGTTTCTCCGCCGCACCCTCAACCCCTGCGATATGAACCTTGCTGGTCTC
TGTCCCATGGTGGCGGGCAAGATTCCCTTTGGTTTCAATCTGCCCATTGATAAAAAGGCGGCAAGCCAGATTCCC
GGCATTGCATACAACATTCCCGATCTCGATGCCACGGTTCGCGTCTTTATCAATATGTCGTCGACGGGCGAGAGC
ATCGCTTGTGTCGAGGCTGACATCTCCAACGGCAAAACTGTCGACCTTATTGGCGTCAAGTGGGCCACGGCCATC
ATTGCTGGCCTTGCACTCCTCTCGTCGGCCATTGTCAATGGTTTGGGCCACTCCAACACGGCTGCCCATGTCGCT
GCCAACTCGCTATCGCTCTTTGGCTACTTCCAGGCCCAGGCCATTCTCGGCCTGACTGGCGTTCACCTGCCACCC
ATTGTCCAGTCTTGGACTCAAGACTTTCAGTGGTCCATGGGAATCATTCGCGTAGGCTTCATGCAAGACATTTTT
ACCTGGTACCAGCGTGCCACTGGTGGTACTCCCTCCACCATTTTCGACTCTCTCACAACGGTTTCGGTCCAGGTT
GCCAAGCGTTCCCTCGAATATGCTTCAGATACCGGCCTCAGCCTCTTTCGACGCGGCGTGGCCATGATGCCCAAG
GCGGCCCACAGCCTGGTTCGTCGCAACAACATCACGACTGGCTCTGGCGCCTACATCGTCTTTGGCATTCAGCGC
GTGGCATTCCGCTCAAAAATTGAGACGACCAATCTCTTCATGACGGGTCTCACATTTTTCTGCGTCTTTGTCGTT
CTCACCGTCCTTGCCGTCTCTGCATTCAAGGGCCTCTGTGAGCTCTTTGTTCGCCAGCGTTGGATGGACAAGGAC
AAGTTTCTCGAGTTTCGCAACGGCTGGCTGACGGTGCTCAAGGGCATTCTCTTCCGAGTTGCTCTTATTGGATTT
CCTCAAATGGCCATTCTCTGCCTGTGGGAGTTTACTCAAGTCGACTCAGCTGCCGAGGTGGTCTTGGCCGTCTTC
TTCTTCTTTGGTCTGGCTATTACACTTGCGTGGGGCGCCAGCAAGGTTATACGCATCGCCCGTCGCTCCGTCGTG
ATGCACCGCAACCCAGCATACATTCTCTTTTCTGACCCTCAAGCTCTCAACAAATGGGGCTTCCTCTACATACAG
TTTCGTGCGTCGGCCTACTACTTTATCGCGCCCGTTCTCGGCTACACCTTGATCAAGGCCATGTTTATTGCATTT
GGCCAGCGCAGTGGCGTCGCCCAGGCTATTGGCTTCGTTATTATTGAAGCCTTGGCCCTTATTGGCGCCTCGGTG
CTTCGTCCGTGGATGGACAAGAGCACCAATTCATTCAACATTGCCATTTGCGTCATCAACTTTATTAATGCCATC
TTTCTCCTAATATTCTCAAACGTCTTTGGCGCACCCACTCTAGTTGTTGGTGTCGTTGGCGTCGTTTTGTTTATT
CTTAATGCCGCTTTTGCCCTAATCCTGCTCATCATGGTTATCGTGTCGACTACCGTCACATTTTTCCGCAAGAAC
CCCGACGCCCGCTACCAGTTCATGGCCGACGACCGCGCATCCTTTATGAAGTCGCAGACGCAGCTGACGACAACG
ACGGAGCTTGACGCTCTGGCAGCTACGGCTCGTGGAGACAAGGCAGGCTTCAAGTCACATCTCGACCTCGACGAT
GACAATGAGTCACTGTCGTCTGAAGATCTTCGACGCCGTGCAGACCCCCATGGTAACAACTCACAAAACTCTTTT
ATTGGCGGGCCGCGATCGCCCGTCAACCCGTCAATGCCTCTGTTTCCCGCAGGCGGTCAGCGGCCACAGAGCCCC
TTTCGCCCAGATTCGCCAAACGCGATGGCGTACAATCGCTCTGGGTCGTCGCTCGGGCAAAATCGAGCCATGAAC
AATGTGAGCCCTGGTGGATATCGTGCGCAAAATTCTTCCAGCCCATGGCAACGCGGAGCTGGCTACGATTAA
Transcript >OphauB2|7110
ATGCGGTCGCTATTCCAGGCACCGCTGCTGCTTCTCTCGTCCATGGCGGCGCTGCTTGCGCCTGCCGCGGGCGAG
AAACTGCTCATGTCCAACTCGCTCAATACCTGCCAGGCCGACTCGAGTTTTACTGCCTCACTCTTCAATGTTGTC
TATACACCCAACAATAGCTCAGCCAGTGTCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTTGAT
CTCTCCATCTCGGCTTATGGCTATCAGTTTCTCCGCCGCACCCTCAACCCCTGCGATATGAACCTTGCTGGTCTC
TGTCCCATGGTGGCGGGCAAGATTCCCTTTGGTTTCAATCTGCCCATTGATAAAAAGGCGGCAAGCCAGATTCCC
GGCATTGCATACAACATTCCCGATCTCGATGCCACGGTTCGCGTCTTTATCAATATGTCGTCGACGGGCGAGAGC
ATCGCTTGTGTCGAGGCTGACATCTCCAACGGCAAAACTGTCGACCTTATTGGCGTCAAGTGGGCCACGGCCATC
ATTGCTGGCCTTGCACTCCTCTCGTCGGCCATTGTCAATGGTTTGGGCCACTCCAACACGGCTGCCCATGTCGCT
GCCAACTCGCTATCGCTCTTTGGCTACTTCCAGGCCCAGGCCATTCTCGGCCTGACTGGCGTTCACCTGCCACCC
ATTGTCCAGTCTTGGACTCAAGACTTTCAGTGGTCCATGGGAATCATTCGCGTAGGCTTCATGCAAGACATTTTT
ACCTGGTACCAGCGTGCCACTGGTGGTACTCCCTCCACCATTTTCGACTCTCTCACAACGGTTTCGGTCCAGGTT
GCCAAGCGTTCCCTCGAATATGCTTCAGATACCGGCCTCAGCCTCTTTCGACGCGGCGTGGCCATGATGCCCAAG
GCGGCCCACAGCCTGGTTCGTCGCAACAACATCACGACTGGCTCTGGCGCCTACATCGTCTTTGGCATTCAGCGC
GTGGCATTCCGCTCAAAAATTGAGACGACCAATCTCTTCATGACGGGTCTCACATTTTTCTGCGTCTTTGTCGTT
CTCACCGTCCTTGCCGTCTCTGCATTCAAGGGCCTCTGTGAGCTCTTTGTTCGCCAGCGTTGGATGGACAAGGAC
AAGTTTCTCGAGTTTCGCAACGGCTGGCTGACGGTGCTCAAGGGCATTCTCTTCCGAGTTGCTCTTATTGGATTT
CCTCAAATGGCCATTCTCTGCCTGTGGGAGTTTACTCAAGTCGACTCAGCTGCCGAGGTGGTCTTGGCCGTCTTC
TTCTTCTTTGGTCTGGCTATTACACTTGCGTGGGGCGCCAGCAAGGTTATACGCATCGCCCGTCGCTCCGTCGTG
ATGCACCGCAACCCAGCATACATTCTCTTTTCTGACCCTCAAGCTCTCAACAAATGGGGCTTCCTCTACATACAG
TTTCGTGCGTCGGCCTACTACTTTATCGCGCCCGTTCTCGGCTACACCTTGATCAAGGCCATGTTTATTGCATTT
GGCCAGCGCAGTGGCGTCGCCCAGGCTATTGGCTTCGTTATTATTGAAGCCTTGGCCCTTATTGGCGCCTCGGTG
CTTCGTCCGTGGATGGACAAGAGCACCAATTCATTCAACATTGCCATTTGCGTCATCAACTTTATTAATGCCATC
TTTCTCCTAATATTCTCAAACGTCTTTGGCGCACCCACTCTAGTTGTTGGTGTCGTTGGCGTCGTTTTGTTTATT
CTTAATGCCGCTTTTGCCCTAATCCTGCTCATCATGGTTATCGTGTCGACTACCGTCACATTTTTCCGCAAGAAC
CCCGACGCCCGCTACCAGTTCATGGCCGACGACCGCGCATCCTTTATGAAGTCGCAGACGCAGCTGACGACAACG
ACGGAGCTTGACGCTCTGGCAGCTACGGCTCGTGGAGACAAGGCAGGCTTCAAGTCACATCTCGACCTCGACGAT
GACAATGAGTCACTGTCGTCTGAAGATCTTCGACGCCGTGCAGACCCCCATGGTAACAACTCACAAAACTCTTTT
ATTGGCGGGCCGCGATCGCCCGTCAACCCGTCAATGCCTCTGTTTCCCGCAGGCGGTCAGCGGCCACAGAGCCCC
TTTCGCCCAGATTCGCCAAACGCGATGGCGTACAATCGCTCTGGGTCGTCGCTCGGGCAAAATCGAGCCATGAAC
AATGTGAGCCCTGGTGGATATCGTGCGCAAAATTCTTCCAGCCCATGGCAACGCGGAGCTGGCTACGATTAA
Gene >OphauB2|7110
ATGCGGTCGCTATTCCAGGCACCGCTGCTGCTTCTCTCGTCCATGGCGGCGCTGCTTGCGCCTGCCGCGGGCGAG
AAACTGCTCATGTCCAACTCGCTCAATACCTGCCAGGCCGACTCGAGTTTTACTGCCTCACTCTTCAATGTTGTC
TATACACCCAACAATAGCTCAGCCAGTGTCAACATGGTGGCCACGTCGTCGGTCCAGGGCAAGGTGCTCTTTGAT
CTCTCCATCTCGGCTTATGGCTATCAGTTTCTCCGCCGCACCCTCAACCCCTGCGATATGAACCTTGCTGGTCTC
TGTCCCATGGTGGCGGGCAAGATTCCCTTTGGTTTCAATCTGCCCATTGATAAAAAGGCGGCAAGCCAGATTCCC
GGCATTGCATACAACATTCCCGATCTCGATGCCACGGTTCGCGTCTTTATCAATATGTCGTCGACGGGCGAGAGC
ATCGCTTGTGTCGAGGCTGACATCTCCAACGGCAAAACTGTCGACCTTATTGGCGTCAAGTGGGCCACGGCCATC
ATTGCTGGCCTTGCACTCCTCTCGTCGGCCATTGTCAATGGTTTGGGCCACTCCAACACGGCTGCCCATGTCGCT
GCCAACTCGCTATCGCTCTTTGGCTACTTCCAGGCCCAGGCCATTCTCGGCCTGACTGGCGTTCACCTGCCACCC
ATTGTCCAGTCTTGGACTCAAGACTTTCAGTGGTCCATGGGAATCATTCGCGTAGGCTTCATGCAAGACATTTTT
ACCTGGTACCAGCGTGCCACTGGTGGTACTCCCTCCACCATTTTCGACTCTCTCACAACGGTTTCGGTCCAGGTT
GCCAAGCGTTCCCTCGAATATGCTTCAGATACCGGCCTCAGCCTCTTTCGACGCGGCGTGGCCATGATGCCCAAG
GCGGCCCACAGCCTGGTTCGTCGCAACAACATCACGACTGGCTCTGGCGCCTACATCGTCTTTGGCATTCAGCGC
GTGGCATTCCGCTCAAAAATTGAGACGACCAATCTCTTCATGACGGGTCTCACATTTTTCTGCGTCTTTGTCGTT
CTCACCGTCCTTGCCGTCTCTGCATTCAAGGGCCTCTGTGAGCTCTTTGTTCGCCAGCGTTGGATGGACAAGGAC
AAGTTTCTCGAGTTTCGCAACGGCTGGCTGACGGTGCTCAAGGGCATTCTCTTCCGAGTTGCTCTTATTGGATTT
CCTCAAATGGCCATTCTCTGCCTGTGGGAGTTTACTCAAGTCGACTCAGCTGCCGAGGTGGTCTTGGCCGTCTTC
TTCTTCTTTGGTCTGGCTATTACACTTGCGTGGGGCGCCAGCAAGGTTATACGCATCGCCCGTCGCTCCGTCGTG
ATGCACCGCAACCCAGCATACATTCTCTTTTCTGACCCTCAAGCTCTCAACAAATGGGGCTTCCTCTACATACAG
TTTCGTGCGTCGGCCTACTACTTTATCGCGCCCGTTCTCGGCTACACCTTGATCAAGGCCATGTTTATTGCATTT
GGCCAGCGCAGTGGCGTCGCCCAGGCTATTGGCTTCGTTATTATTGAAGCCTTGGCCCTTATTGGCGCCTCGGTG
CTTCGTCCGTGGATGGACAAGAGCACCAATTCATTCAACATTGCCATTTGCGTCATCAACTTTATTAATGCCATC
TTTCTCCTAATATTCTCAAACGTCTTTGGCGCACCCACTCTAGTTGTTGGTGTCGTTGGCGTCGTTTTGTTTATT
CTTAATGCCGCTTTTGCCCTAATCCTGCTCATCATGGTTATCGTGTCGACTACCGTCACATTTTTCCGCAAGAAC
CCCGACGCCCGCTACCAGTTCATGGCCGACGACCGCGCATCCTTTATGAAGTCGCAGACGCAGCTGACGACAACG
ACGGAGCTTGACGCTCTGGCAGCTACGGCTCGTGGAGACAAGGCAGGCTTCAAGTCACATCTCGACCTCGACGAT
GACAATGAGTCACTGTCGTCTGAAGATCTTCGACGCCGTGCAGACCCCCATGGTAACAACTCACAAAACTCTTTT
ATTGGCGGGCCGCGATCGCCCGTCAACCCGTCAATGCCTCTGTTTCCCGCAGGCGGTCAGCGGCCACAGAGCCCC
TTTCGCCCAGATTCGCCAAACGCGATGGCGTACAATCGCTCTGGGTCGTCGCTCGGGCAAAATCGAGCCATGAAC
AATGTGAGCCCTGGTGGATATCGTGCGCAAAATTCTTCCAGGTGAGCAAGCTCTCTTTTATTTGAATGCAGTGGA
TAGAGCTATACTGACTAGTCGCTTACGAGCAGCCCATGGCAACGCGGAGCTGGCTACGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail