© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7097 |
| Gene name | |
| Location | Contig_71:476..1829 |
| Strand | - |
| Gene length (bp) | 1353 |
| Transcript length (bp) | 1227 |
| Coding sequence length (bp) | 1227 |
| Protein length (aa) | 409 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01435 | Peptidase_M48 | Peptidase family M48 | 1.2E-33 | 179 | 369 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7G4|OMA1_SCHPO | Mitochondrial metalloendopeptidase OMA1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oma1 PE=3 SV=1 | 117 | 382 | 3.0E-53 |
| sp|P36163|OMA1_YEAST | Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMA1 PE=1 SV=2 | 195 | 392 | 4.0E-41 |
| sp|E9QBI7|OMA1_DANRE | Metalloendopeptidase OMA1, mitochondrial OS=Danio rerio GN=oma1 PE=3 SV=1 | 119 | 382 | 1.0E-32 |
| sp|Q3SZN3|OMA1_BOVIN | Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus GN=OMA1 PE=2 SV=2 | 122 | 386 | 2.0E-31 |
| sp|Q96E52|OMA1_HUMAN | Metalloendopeptidase OMA1, mitochondrial OS=Homo sapiens GN=OMA1 PE=1 SV=1 | 122 | 386 | 1.0E-30 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7G4|OMA1_SCHPO | Mitochondrial metalloendopeptidase OMA1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oma1 PE=3 SV=1 | 117 | 382 | 3.0E-53 |
| sp|P36163|OMA1_YEAST | Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMA1 PE=1 SV=2 | 195 | 392 | 4.0E-41 |
| sp|E9QBI7|OMA1_DANRE | Metalloendopeptidase OMA1, mitochondrial OS=Danio rerio GN=oma1 PE=3 SV=1 | 119 | 382 | 1.0E-32 |
| sp|Q3SZN3|OMA1_BOVIN | Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus GN=OMA1 PE=2 SV=2 | 122 | 386 | 2.0E-31 |
| sp|Q96E52|OMA1_HUMAN | Metalloendopeptidase OMA1, mitochondrial OS=Homo sapiens GN=OMA1 PE=1 SV=1 | 122 | 386 | 1.0E-30 |
| sp|D3ZS74|OMA1_RAT | Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus GN=Oma1 PE=3 SV=1 | 122 | 386 | 4.0E-30 |
| sp|Q9D8H7|OMA1_MOUSE | Metalloendopeptidase OMA1, mitochondrial OS=Mus musculus GN=Oma1 PE=1 SV=1 | 122 | 386 | 5.0E-29 |
| sp|P66950|BEPA_SALTY | Beta-barrel assembly-enhancing protease OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=bepA PE=3 SV=1 | 214 | 364 | 2.0E-11 |
| sp|P66951|BEPA_SALTI | Beta-barrel assembly-enhancing protease OS=Salmonella typhi GN=bepA PE=3 SV=1 | 214 | 364 | 2.0E-11 |
| sp|Q8ZCC3|BEPA_YERPE | Beta-barrel assembly-enhancing protease OS=Yersinia pestis GN=bepA PE=3 SV=1 | 214 | 364 | 4.0E-11 |
| sp|P66949|BEPA_SHIFL | Beta-barrel assembly-enhancing protease OS=Shigella flexneri GN=bepA PE=3 SV=1 | 190 | 364 | 2.0E-10 |
| sp|P66948|BEPA_ECOLI | Beta-barrel assembly-enhancing protease OS=Escherichia coli (strain K12) GN=bepA PE=1 SV=1 | 190 | 364 | 2.0E-10 |
| sp|Q8XAD2|BEPA_ECO57 | Beta-barrel assembly-enhancing protease OS=Escherichia coli O157:H7 GN=bepA PE=3 SV=1 | 190 | 364 | 2.0E-10 |
| sp|Q9KQ40|BEPA_VIBCH | Putative beta-barrel assembly-enhancing protease OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_2164 PE=3 SV=1 | 211 | 368 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0008233 | peptidase activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0019538 | protein metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008237 | metallopeptidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003824 | catalytic activity | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 115 | 132 | 17 |
| 2 | 262 | 284 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 5297 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7097 MLARRFTQPSRCTKVAWALGVFASGRASRSGLTPLVVVCCRGLSHSPPQLARHPNHGHHDHDDRHGQAHQDHAYL RQDHAYLRQHNELLRNARPLVSHSAVDRFSKVGSGRRQRLLVLGVIVLAVGYYLSSAQKVPATGRWRFNILSDDF VAASYAGSDDKFIAAIRARGGRFLSNWDQRARMAERVMKRLISVSGMDHLDWKITIIDDPKTANAFVLPGGKVFI FSGLLDVCGSEDALATVLGHEMAHNTASHCAERLSAAWVGNITLGSLFFLVGSMPGLLMFSMWNLIGGYYLQDLV FYLPMGRKQESEADYIGLMMMAEACYDPRTAIGFWSRMQQLSQQAGFELPEMFSTHPTNEHRVAQMKKWMPAAMK KRTESDCSGTSAFADRFRAHLRGGLPPVNTLWR* |
| Coding | >OphauB2|7097 ATGTTGGCTCGCCGCTTCACGCAGCCAAGCCGCTGCACCAAGGTGGCTTGGGCTCTTGGAGTCTTTGCATCAGGC CGTGCGAGTCGTAGCGGGTTGACGCCTCTGGTTGTGGTTTGTTGCCGAGGCTTGTCGCACTCGCCGCCGCAGCTT GCCCGACACCCAAACCATGGCCACCACGACCACGACGACCGCCACGGCCAAGCGCACCAGGACCACGCCTATCTG CGCCAGGATCACGCCTATCTGCGCCAGCACAACGAGCTCCTGCGCAATGCGCGTCCGCTGGTGTCGCACTCGGCT GTTGATCGCTTCTCAAAGGTGGGCAGTGGCCGTAGACAACGCCTCCTTGTCCTTGGCGTGATTGTTTTGGCTGTG GGCTACTATCTCTCGAGCGCGCAAAAGGTGCCTGCTACGGGTCGCTGGCGCTTCAACATTCTCTCGGATGACTTT GTTGCCGCTTCGTATGCAGGCTCCGACGACAAGTTTATAGCAGCAATCAGGGCCCGAGGTGGCCGGTTCCTCTCC AACTGGGACCAGCGCGCCCGGATGGCTGAGCGTGTCATGAAGCGCTTGATTTCTGTCAGCGGCATGGATCATTTG GATTGGAAGATTACCATTATTGACGATCCAAAAACTGCCAATGCCTTTGTCTTGCCTGGTGGCAAGGTGTTCATC TTTAGCGGCCTTTTGGATGTCTGTGGCAGCGAAGACGCCCTGGCCACGGTTCTCGGCCACGAGATGGCACACAAC ACGGCATCGCATTGCGCTGAACGCCTCTCAGCCGCCTGGGTGGGCAACATTACGCTCGGCAGCCTCTTCTTCCTC GTTGGCTCCATGCCGGGCCTCCTCATGTTTAGCATGTGGAATTTAATCGGGGGCTACTATCTCCAGGATTTGGTC TTTTACCTTCCCATGGGCCGAAAGCAGGAAAGCGAGGCCGACTACATTGGCCTGATGATGATGGCTGAGGCATGC TACGACCCGCGTACCGCCATTGGTTTCTGGAGTCGAATGCAACAATTGTCGCAACAGGCCGGCTTCGAGTTGCCC GAGATGTTTAGCACGCATCCGACGAACGAACACAGGGTAGCCCAAATGAAGAAGTGGATGCCAGCGGCCATGAAG AAGCGCACCGAAAGCGACTGCAGCGGAACATCTGCCTTTGCAGACCGCTTCAGAGCTCACTTGAGGGGAGGCTTA CCCCCTGTAAACACTCTTTGGAGATGA |
| Transcript | >OphauB2|7097 ATGTTGGCTCGCCGCTTCACGCAGCCAAGCCGCTGCACCAAGGTGGCTTGGGCTCTTGGAGTCTTTGCATCAGGC CGTGCGAGTCGTAGCGGGTTGACGCCTCTGGTTGTGGTTTGTTGCCGAGGCTTGTCGCACTCGCCGCCGCAGCTT GCCCGACACCCAAACCATGGCCACCACGACCACGACGACCGCCACGGCCAAGCGCACCAGGACCACGCCTATCTG CGCCAGGATCACGCCTATCTGCGCCAGCACAACGAGCTCCTGCGCAATGCGCGTCCGCTGGTGTCGCACTCGGCT GTTGATCGCTTCTCAAAGGTGGGCAGTGGCCGTAGACAACGCCTCCTTGTCCTTGGCGTGATTGTTTTGGCTGTG GGCTACTATCTCTCGAGCGCGCAAAAGGTGCCTGCTACGGGTCGCTGGCGCTTCAACATTCTCTCGGATGACTTT GTTGCCGCTTCGTATGCAGGCTCCGACGACAAGTTTATAGCAGCAATCAGGGCCCGAGGTGGCCGGTTCCTCTCC AACTGGGACCAGCGCGCCCGGATGGCTGAGCGTGTCATGAAGCGCTTGATTTCTGTCAGCGGCATGGATCATTTG GATTGGAAGATTACCATTATTGACGATCCAAAAACTGCCAATGCCTTTGTCTTGCCTGGTGGCAAGGTGTTCATC TTTAGCGGCCTTTTGGATGTCTGTGGCAGCGAAGACGCCCTGGCCACGGTTCTCGGCCACGAGATGGCACACAAC ACGGCATCGCATTGCGCTGAACGCCTCTCAGCCGCCTGGGTGGGCAACATTACGCTCGGCAGCCTCTTCTTCCTC GTTGGCTCCATGCCGGGCCTCCTCATGTTTAGCATGTGGAATTTAATCGGGGGCTACTATCTCCAGGATTTGGTC TTTTACCTTCCCATGGGCCGAAAGCAGGAAAGCGAGGCCGACTACATTGGCCTGATGATGATGGCTGAGGCATGC TACGACCCGCGTACCGCCATTGGTTTCTGGAGTCGAATGCAACAATTGTCGCAACAGGCCGGCTTCGAGTTGCCC GAGATGTTTAGCACGCATCCGACGAACGAACACAGGGTAGCCCAAATGAAGAAGTGGATGCCAGCGGCCATGAAG AAGCGCACCGAAAGCGACTGCAGCGGAACATCTGCCTTTGCAGACCGCTTCAGAGCTCACTTGAGGGGAGGCTTA CCCCCTGTAAACACTCTTTGGAGATGA |
| Gene | >OphauB2|7097 ATGTTGGCTCGCCGCTTCACGCAGCCAAGCCGCTGCACCAAGGTGGCTTGGGCTCTTGGAGTCTTTGCATCAGGC CGTGCGAGTCGTAGCGGGTTGACGCCTCTGGTTGTGGTTTGTTGCCGAGGCTTGTCGCACTCGCCGCCGCAGCTT GCCCGACACCCAAACCATGGCCACCACGACCACGACGACCGCCACGGCCAAGCGCACCAGGACCACGCCTATCTG CGCCAGGATCACGCCTATCTGCGCCAGCACAACGAGCTCCTGCGCAATGCGCGTCCGCTGGTGTCGCACTCGGCT GTTGATCGCTTCTCAAAGGTGGGCAGTGGCCGTAGACAACGCCTCCTTGTCCTTGGCGTGATTGTTTTGGCTGTG GGCTACTATCTCTCGAGCGCGCAAAAGGTGCCTGCTACGGGTCGCTGGCGCTTCAACATTCTCTCGGATGACTTT GTTGCCGCTTCGTATGCAGGCTCCGACGACAAGTTTATAGCAGCAATCAGGGCCCGAGGTGGCCGGTTCCTCTCC AACTGGGACCAGCGCGCCCGGATGGCTGAGCGTGTCATGAAGCGCTTGATTTCTGTCAGCGGCATGGATCATTTG GATTGGAAGATTACCATTATTGACGATCCAAGTGCGTTGTTGTCCCAACCACTAGACGCTGCTGGCATGCTAACT CATGGGCCTCGTTTTAGAAACTGCCAATGCCTTTGTCTTGCCTGGTGGCAAGGTGTTCATCTTTAGCGGCCTTTT GGATGTCTGTGGCAGCGAAGACGCCCTGGCCACGGTTCTCGGCCACGAGATGGCACACAACACGGCATCGCATTG CGCTGAACGCCTCTCAGCCGCCTGGGTGGGCAACATTACGCTCGGCAGCCTCTTCTTCCTCGTTGGCTCCATGCC GGGCCTCCTCATGTTTAGCATGTGGAATTTAATCGGGGGCTACTATCTCCAGGATTTGGTCTTTTACCTTCCCAT GGGCCGAAAGCAGGAAAGCGAGGCCGACTACATTGGCCTGATGATGATGGCTGAGGCATGCTACGACCCGCGTAC CGCCATTGGTTTCTGGAGTCGAATGCAACAATTGTCGCAACAGGCCGGCTTCGAGTTGCCCGAGATGTTTAGCAC GCATCCGACGGTAAGCACGCACATGACTCTTGCTTGGCAAGGTGGGGGAGAAGGGCCATGCTGACATGCAGGCAG AACGAACACAGGGTAGCCCAAATGAAGAAGTGGATGCCAGCGGCCATGAAGAAGCGCACCGAAAGCGACTGCAGC GGAACATCTGCCTTTGCAGACCGCTTCAGAGCTCACTTGAGGGGAGGCTTACCCCCTGTAAACACTCTTTGGAGA TGA |