Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|708
Gene name
LocationContig_113:48928..50451
Strand-
Gene length (bp)1523
Transcript length (bp)1455
Coding sequence length (bp)1455
Protein length (aa) 485

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 2.9E-17 30 165
PF08031 BBE Berberine and berberine like 7.4E-10 420 468

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 6 483 5.0E-61
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 6 471 1.0E-42
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 34 199 5.0E-10

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No
GO:0043168 anion binding No
GO:0000166 nucleotide binding No
GO:0050662 coenzyme binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:1901265 nucleoside phosphate binding No
GO:0036094 small molecule binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0048037 cofactor binding No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|708
MNPYFQNQSCDPFTPQMTPCELGNYASYSINITSPKHVVAAIEFCREHNVRLVIKNTGHDFLGKSTGKGALSLWT
RNLKTSKFIKRYKSDKYKGPAMKLGAGVTAYEALEAAYSTGHRTVGGDCPTVGISGGYTQGGGHSPLTSAYGMAA
DQALEWELITAAGQHLIATPTKNADLYWALSGGGPGTFAIVLAVTVKVYPEGPMGTAMLSFNGSTVDHETYLSAM
DGWWMALPDIVDSGATVIWSVSSDGFAFRMLNAPDKTANQVAAMMDPFLRRLANLGVNYVFVPGQTSSYYEHYNQ
TMGPLPYGSWPASMLFNSRMVPRAVAESDQGRSKLTAAMHAIVMNKTVAPWSFGCSAFNVRNISHPANAVASYWR
DAIALCNSISLWDWTIPRSEMLARKVYLAEAIAAKVEAVTPGSGAYLNEVDSFMYPPNSLRWQEDLYGSNYAKLR
SIKDKWDPDSIFYAHTAVGSEDWLVDDIGRLCRN*
Coding >OphauB2|708
ATGAACCCCTATTTCCAAAACCAATCCTGCGATCCGTTTACGCCGCAGATGACGCCCTGTGAGCTCGGCAACTAT
GCGAGCTACTCCATCAACATTACGAGTCCCAAGCACGTCGTGGCAGCCATTGAATTTTGCCGGGAGCATAATGTC
CGGTTGGTTATTAAAAACACGGGGCACGACTTCCTTGGTAAATCCACCGGTAAAGGCGCTCTGAGTCTCTGGACT
CGTAACCTAAAGACTAGCAAGTTCATCAAGAGATACAAATCGGACAAATACAAGGGCCCCGCCATGAAGCTAGGT
GCTGGAGTCACGGCATATGAAGCACTAGAAGCTGCCTACTCTACGGGACATCGCACCGTGGGCGGAGATTGTCCG
ACCGTTGGCATTTCAGGGGGCTACACTCAAGGGGGTGGACATTCGCCCTTAACCAGTGCATATGGAATGGCGGCA
GATCAGGCCTTGGAGTGGGAACTCATCACTGCAGCTGGCCAACACCTTATTGCCACTCCAACAAAAAACGCCGAC
CTGTACTGGGCTCTCAGCGGTGGTGGTCCTGGCACCTTTGCCATTGTCCTCGCCGTAACCGTCAAGGTCTATCCC
GAGGGGCCCATGGGCACGGCGATGCTAAGCTTCAATGGCTCGACGGTAGACCATGAGACGTATCTCTCCGCCATG
GATGGCTGGTGGATGGCGCTGCCTGATATCGTCGATTCCGGTGCTACCGTCATCTGGTCTGTTTCCAGCGACGGC
TTCGCCTTTAGGATGTTGAACGCGCCGGACAAAACCGCCAACCAAGTGGCTGCTATGATGGACCCCTTTCTCAGG
CGACTTGCAAACCTCGGAGTCAATTATGTCTTTGTGCCGGGGCAGACATCTAGCTACTACGAGCATTACAACCAG
ACAATGGGGCCTCTGCCGTACGGAAGCTGGCCCGCCTCCATGCTGTTTAATAGCAGAATGGTACCCCGCGCCGTT
GCGGAGAGCGACCAAGGCAGATCAAAGCTGACGGCCGCTATGCATGCCATCGTCATGAACAAAACAGTCGCTCCC
TGGAGCTTTGGCTGCAGCGCTTTCAACGTCCGCAACATCAGCCACCCGGCCAATGCCGTTGCCTCATACTGGCGA
GATGCTATTGCCCTATGCAACTCCATCTCCTTATGGGATTGGACAATTCCCAGGTCCGAGATGCTGGCCCGCAAA
GTATACCTCGCAGAGGCTATCGCAGCAAAAGTCGAAGCGGTCACTCCTGGTTCTGGAGCGTACCTCAATGAAGTC
GACTCGTTTATGTATCCGCCCAACTCACTAAGGTGGCAAGAGGACTTGTATGGGTCAAACTACGCTAAGCTTCGA
AGTATTAAGGATAAGTGGGATCCTGATTCTATATTTTATGCTCACACGGCTGTTGGCAGCGAGGACTGGCTTGTT
GATGATATTGGTCGGCTCTGTAGGAATTAG
Transcript >OphauB2|708
ATGAACCCCTATTTCCAAAACCAATCCTGCGATCCGTTTACGCCGCAGATGACGCCCTGTGAGCTCGGCAACTAT
GCGAGCTACTCCATCAACATTACGAGTCCCAAGCACGTCGTGGCAGCCATTGAATTTTGCCGGGAGCATAATGTC
CGGTTGGTTATTAAAAACACGGGGCACGACTTCCTTGGTAAATCCACCGGTAAAGGCGCTCTGAGTCTCTGGACT
CGTAACCTAAAGACTAGCAAGTTCATCAAGAGATACAAATCGGACAAATACAAGGGCCCCGCCATGAAGCTAGGT
GCTGGAGTCACGGCATATGAAGCACTAGAAGCTGCCTACTCTACGGGACATCGCACCGTGGGCGGAGATTGTCCG
ACCGTTGGCATTTCAGGGGGCTACACTCAAGGGGGTGGACATTCGCCCTTAACCAGTGCATATGGAATGGCGGCA
GATCAGGCCTTGGAGTGGGAACTCATCACTGCAGCTGGCCAACACCTTATTGCCACTCCAACAAAAAACGCCGAC
CTGTACTGGGCTCTCAGCGGTGGTGGTCCTGGCACCTTTGCCATTGTCCTCGCCGTAACCGTCAAGGTCTATCCC
GAGGGGCCCATGGGCACGGCGATGCTAAGCTTCAATGGCTCGACGGTAGACCATGAGACGTATCTCTCCGCCATG
GATGGCTGGTGGATGGCGCTGCCTGATATCGTCGATTCCGGTGCTACCGTCATCTGGTCTGTTTCCAGCGACGGC
TTCGCCTTTAGGATGTTGAACGCGCCGGACAAAACCGCCAACCAAGTGGCTGCTATGATGGACCCCTTTCTCAGG
CGACTTGCAAACCTCGGAGTCAATTATGTCTTTGTGCCGGGGCAGACATCTAGCTACTACGAGCATTACAACCAG
ACAATGGGGCCTCTGCCGTACGGAAGCTGGCCCGCCTCCATGCTGTTTAATAGCAGAATGGTACCCCGCGCCGTT
GCGGAGAGCGACCAAGGCAGATCAAAGCTGACGGCCGCTATGCATGCCATCGTCATGAACAAAACAGTCGCTCCC
TGGAGCTTTGGCTGCAGCGCTTTCAACGTCCGCAACATCAGCCACCCGGCCAATGCCGTTGCCTCATACTGGCGA
GATGCTATTGCCCTATGCAACTCCATCTCCTTATGGGATTGGACAATTCCCAGGTCCGAGATGCTGGCCCGCAAA
GTATACCTCGCAGAGGCTATCGCAGCAAAAGTCGAAGCGGTCACTCCTGGTTCTGGAGCGTACCTCAATGAAGTC
GACTCGTTTATGTATCCGCCCAACTCACTAAGGTGGCAAGAGGACTTGTATGGGTCAAACTACGCTAAGCTTCGA
AGTATTAAGGATAAGTGGGATCCTGATTCTATATTTTATGCTCACACGGCTGTTGGCAGCGAGGACTGGCTTGTT
GATGATATTGGTCGGCTCTGTAGGAATTAG
Gene >OphauB2|708
ATGAACCCCTATTTCCAAAACCAATCCTGCGATCCGTTTACGCCGCAGATGACGCCCTGTGAGCTCGGCAACTAT
GCGAGCTACTCCATCAACATTACGAGTCCCAAGCACGTCGTGGCAGCCATTGAATTTTGCCGGGAGCATAATGTC
CGGTTGGTTATTAAAAACACGGGGCACGAGTAAGTCCTTTTCCACAGTCATTGACATGGCTTCAATCTTGAAGCT
GAACCTGCTGCCGTCTCGCAAGCTTCCTTGGTAAATCCACCGGTAAAGGCGCTCTGAGTCTCTGGACTCGTAACC
TAAAGACTAGCAAGTTCATCAAGAGATACAAATCGGACAAATACAAGGGCCCCGCCATGAAGCTAGGTGCTGGAG
TCACGGCATATGAAGCACTAGAAGCTGCCTACTCTACGGGACATCGCACCGTGGGCGGAGATTGTCCGACCGTTG
GCATTTCAGGGGGCTACACTCAAGGGGGTGGACATTCGCCCTTAACCAGTGCATATGGAATGGCGGCAGATCAGG
CCTTGGAGTGGGAACTCATCACTGCAGCTGGCCAACACCTTATTGCCACTCCAACAAAAAACGCCGACCTGTACT
GGGCTCTCAGCGGTGGTGGTCCTGGCACCTTTGCCATTGTCCTCGCCGTAACCGTCAAGGTCTATCCCGAGGGGC
CCATGGGCACGGCGATGCTAAGCTTCAATGGCTCGACGGTAGACCATGAGACGTATCTCTCCGCCATGGATGGCT
GGTGGATGGCGCTGCCTGATATCGTCGATTCCGGTGCTACCGTCATCTGGTCTGTTTCCAGCGACGGCTTCGCCT
TTAGGATGTTGAACGCGCCGGACAAAACCGCCAACCAAGTGGCTGCTATGATGGACCCCTTTCTCAGGCGACTTG
CAAACCTCGGAGTCAATTATGTCTTTGTGCCGGGGCAGACATCTAGCTACTACGAGCATTACAACCAGACAATGG
GGCCTCTGCCGTACGGAAGCTGGCCCGCCTCCATGCTGTTTAATAGCAGAATGGTACCCCGCGCCGTTGCGGAGA
GCGACCAAGGCAGATCAAAGCTGACGGCCGCTATGCATGCCATCGTCATGAACAAAACAGTCGCTCCCTGGAGCT
TTGGCTGCAGCGCTTTCAACGTCCGCAACATCAGCCACCCGGCCAATGCCGTTGCCTCATACTGGCGAGATGCTA
TTGCCCTATGCAACTCCATCTCCTTATGGGATTGGACAATTCCCAGGTCCGAGATGCTGGCCCGCAAAGTATACC
TCGCAGAGGCTATCGCAGCAAAAGTCGAAGCGGTCACTCCTGGTTCTGGAGCGTACCTCAATGAAGTCGACTCGT
TTATGTATCCGCCCAACTCACTAAGGTGGCAAGAGGACTTGTATGGGTCAAACTACGCTAAGCTTCGAAGTATTA
AGGATAAGTGGGATCCTGATTCTATATTTTATGCTCACACGGCTGTTGGCAGCGAGGACTGGCTTGTTGATGATA
TTGGTCGGCTCTGTAGGAATTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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