Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|702
Gene name
Location	Contig_113:34359..35789
Strand	-
Gene length (bp)	1430
Transcript length (bp)	1317
Coding sequence length (bp)	1317
Protein length (aa)	439

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02469	Fasciclin	Fasciclin domain	3.8E-15	113	245
PF02469	Fasciclin	Fasciclin domain	2.1E-23	259	406

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q8CFM6\|STAB2_RAT	Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1	140	333	2.0E-07
sp\|Q8WWQ8\|STAB2_HUMAN	Stabilin-2 OS=Homo sapiens GN=STAB2 PE=1 SV=3	102	407	4.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|702 MKAALLVSSLIFAQAVPAPDGLPQQHPLGHVTQSRGQSKPGFWPSGLMSSTASNAVDQTVEAFESALEAAQRAAS RLSHRLEAALDEHGDGGHKHRDWSGKTIYQQIHACKYTSRFAKLVDKYPDIVKLLNGTHRDSNITLFVPVDKAFE DPHRGHKHYDDDDKEATEKLLRYHIGIGEYPALRILATNTLPTALHQERLGGDAQRLRTSVGLGGVEVNFYSKVV AADFKASNGIIHGVNHILAPPPPVGLLLTAFPSHFSTLLLAYEKTDFVNFVHGVHMPGGSTVFAPSNGAFTRLGE KTNSFLFNTGSGRKYLSALLKYHIVPNATLYSDAYYDHVDSETKPLASRREHYDLTTLLGDSRVSADVLRWAGFA FFRINGFAHVSVRDGVAGNGVVQVLDSVLIPPHKHSATATDNDSDTAGSMDVEELKARLEPYL*
Coding	>OphauB2\|702 ATGAAGGCTGCACTTTTAGTATCTAGTCTGATCTTTGCGCAAGCCGTGCCAGCGCCAGACGGCTTGCCTCAGCAG CATCCTCTTGGCCATGTTACGCAAAGCCGAGGACAGTCCAAGCCCGGCTTTTGGCCCAGCGGGCTCATGTCGAGC ACCGCTAGCAATGCAGTAGACCAGACTGTGGAAGCCTTTGAATCCGCCCTCGAGGCCGCCCAACGCGCTGCTTCT CGTCTCTCGCATCGACTGGAAGCCGCCTTGGATGAGCATGGCGACGGCGGACACAAGCATCGCGACTGGAGTGGC AAGACGATTTACCAGCAGATCCACGCATGCAAGTACACGTCGCGCTTTGCAAAGCTGGTCGACAAGTATCCCGAC ATTGTCAAGCTGCTCAACGGCACGCACCGAGACTCCAACATTACGCTCTTTGTGCCTGTTGACAAGGCTTTTGAA GACCCGCATCGTGGCCATAAGCACTACGACGACGATGACAAGGAGGCGACTGAGAAGCTGCTCAGGTACCACATT GGCATTGGGGAGTATCCCGCCCTCCGTATCCTAGCAACCAATACGCTGCCCACGGCGCTCCATCAAGAACGCTTG GGAGGCGATGCCCAGCGGCTGCGCACGAGCGTCGGCCTCGGCGGTGTCGAAGTCAACTTTTATAGCAAAGTAGTT GCCGCCGATTTTAAAGCCTCCAACGGCATCATTCATGGCGTCAACCACATCCTCGCACCGCCACCCCCCGTCGGA CTCCTCCTGACCGCATTTCCCAGCCACTTTTCCACTCTGTTACTGGCCTACGAAAAGACGGATTTTGTAAACTTT GTCCACGGCGTGCACATGCCTGGCGGAAGCACCGTCTTTGCCCCCAGCAACGGCGCCTTTACTCGCCTCGGCGAA AAGACCAACTCATTCCTCTTCAACACGGGATCGGGGCGCAAGTACTTGAGCGCGCTGCTCAAATATCACATTGTG CCCAATGCCACGCTCTATAGCGACGCCTACTACGACCACGTAGATAGCGAGACGAAGCCTCTGGCGTCTCGGCGG GAGCACTACGACTTGACGACGCTGCTCGGAGACTCTCGCGTCAGCGCCGACGTGCTGAGGTGGGCAGGCTTTGCC TTTTTCCGAATCAATGGCTTTGCCCACGTCAGTGTGCGTGATGGCGTGGCGGGGAATGGAGTCGTGCAAGTGCTC GACTCGGTGCTGATTCCGCCTCACAAGCACTCGGCTACTGCGACTGACAACGACTCGGACACGGCGGGTAGCATG GATGTCGAGGAGCTCAAAGCCAGGCTAGAACCCTATCTCTGA
Transcript	>OphauB2\|702 ATGAAGGCTGCACTTTTAGTATCTAGTCTGATCTTTGCGCAAGCCGTGCCAGCGCCAGACGGCTTGCCTCAGCAG CATCCTCTTGGCCATGTTACGCAAAGCCGAGGACAGTCCAAGCCCGGCTTTTGGCCCAGCGGGCTCATGTCGAGC ACCGCTAGCAATGCAGTAGACCAGACTGTGGAAGCCTTTGAATCCGCCCTCGAGGCCGCCCAACGCGCTGCTTCT CGTCTCTCGCATCGACTGGAAGCCGCCTTGGATGAGCATGGCGACGGCGGACACAAGCATCGCGACTGGAGTGGC AAGACGATTTACCAGCAGATCCACGCATGCAAGTACACGTCGCGCTTTGCAAAGCTGGTCGACAAGTATCCCGAC ATTGTCAAGCTGCTCAACGGCACGCACCGAGACTCCAACATTACGCTCTTTGTGCCTGTTGACAAGGCTTTTGAA GACCCGCATCGTGGCCATAAGCACTACGACGACGATGACAAGGAGGCGACTGAGAAGCTGCTCAGGTACCACATT GGCATTGGGGAGTATCCCGCCCTCCGTATCCTAGCAACCAATACGCTGCCCACGGCGCTCCATCAAGAACGCTTG GGAGGCGATGCCCAGCGGCTGCGCACGAGCGTCGGCCTCGGCGGTGTCGAAGTCAACTTTTATAGCAAAGTAGTT GCCGCCGATTTTAAAGCCTCCAACGGCATCATTCATGGCGTCAACCACATCCTCGCACCGCCACCCCCCGTCGGA CTCCTCCTGACCGCATTTCCCAGCCACTTTTCCACTCTGTTACTGGCCTACGAAAAGACGGATTTTGTAAACTTT GTCCACGGCGTGCACATGCCTGGCGGAAGCACCGTCTTTGCCCCCAGCAACGGCGCCTTTACTCGCCTCGGCGAA AAGACCAACTCATTCCTCTTCAACACGGGATCGGGGCGCAAGTACTTGAGCGCGCTGCTCAAATATCACATTGTG CCCAATGCCACGCTCTATAGCGACGCCTACTACGACCACGTAGATAGCGAGACGAAGCCTCTGGCGTCTCGGCGG GAGCACTACGACTTGACGACGCTGCTCGGAGACTCTCGCGTCAGCGCCGACGTGCTGAGGTGGGCAGGCTTTGCC TTTTTCCGAATCAATGGCTTTGCCCACGTCAGTGTGCGTGATGGCGTGGCGGGGAATGGAGTCGTGCAAGTGCTC GACTCGGTGCTGATTCCGCCTCACAAGCACTCGGCTACTGCGACTGACAACGACTCGGACACGGCGGGTAGCATG GATGTCGAGGAGCTCAAAGCCAGGCTAGAACCCTATCTCTGA
Gene	>OphauB2\|702 ATGAAGGCTGCACTTTTAGTATCTAGTCTGATCTTTGCGCAAGCCGTGCCAGCGCCAGACGGCTTGCCTCAGCAG CATCCTCTTGGCCATGTTACGCAAAGCCGAGGACAGTCCAAGCCCGGCTTTTGGCCCAGCGGGCTCATGTCGAGC ACCGCTAGCAATGCAGTAGACCAGACTGTGGAAGCCTTTGAATCCGCCCTCGAGGCCGCCCAACGCGCTGCTTCT CGTCTCTCGCATCGACTGGAAGCCGCCTTGGATGAGCATGGCGACGGCGGACACAAGCATCGCGACTGGAGTGGC AAGACGATTTACCAGCAGATCCACGCATGCAAGTACACGTCGCGCTTTGCAAAGCTGGTCGACAAGTATCCCGAC ATTGTCAAGCTGCTCAACGGCACGCACCGAGACTCCAACATTACGCTCTTTGTGCCTGTTGACAAGGCTTTTGAA GACCCGCATCGTGGCCATAAGCACTACGACGACGATGACAAGGAGGCGACTGAGAAGCTGCTCAGGTACCACATT GGCATTGGGGAGTATCCCGCCCTCCGTATCCTAGCAACCAATACGCTGCCCACGGCGCTCCATCAAGAACGCTTG GGAGGCGATGCCCAGCGGCTGCGCACGAGCGTCGGCCTCGGCGGTGTCGAAGTCAACTTTTATAGCAAAGTAGTT GCCGCCGATTTTGTATGTGCCCTCACGACTAACCATGTCTGACCGTTTTTTTTTTTTTTTGTTTTTTTTTCTGGT TTTTTTTTACGTCTTCTTTTGCTAAACTCTCATCTTTCTCTTCTTACTAGAAAGCCTCCAACGGCATCATTCATG GCGTCAACCACATCCTCGCACCGCCACCCCCCGTCGGACTCCTCCTGACCGCATTTCCCAGCCACTTTTCCACTC TGTTACTGGCCTACGAAAAGACGGATTTTGTAAACTTTGTCCACGGCGTGCACATGCCTGGCGGAAGCACCGTCT TTGCCCCCAGCAACGGCGCCTTTACTCGCCTCGGCGAAAAGACCAACTCATTCCTCTTCAACACGGGATCGGGGC GCAAGTACTTGAGCGCGCTGCTCAAATATCACATTGTGCCCAATGCCACGCTCTATAGCGACGCCTACTACGACC ACGTAGATAGCGAGACGAAGCCTCTGGCGTCTCGGCGGGAGCACTACGACTTGACGACGCTGCTCGGAGACTCTC GCGTCAGCGCCGACGTGCTGAGGTGGGCAGGCTTTGCCTTTTTCCGAATCAATGGCTTTGCCCACGTCAGTGTGC GTGATGGCGTGGCGGGGAATGGAGTCGTGCAAGTGCTCGACTCGGTGCTGATTCCGCCTCACAAGCACTCGGCTA CTGCGACTGACAACGACTCGGACACGGCGGGTAGCATGGATGTCGAGGAGCTCAAAGCCAGGCTAGAACCCTATC TCTGA

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