© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|7002 |
| Gene name | |
| Location | Contig_7:127434..128011 |
| Strand | - |
| Gene length (bp) | 577 |
| Transcript length (bp) | 522 |
| Coding sequence length (bp) | 522 |
| Protein length (aa) | 174 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 4.1E-22 | 1 | 159 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 1 | 159 | 4.0E-14 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 3 | 173 | 9.0E-11 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 2 | 100 | 9.0E-10 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 3 | 136 | 4.0E-08 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 2 | 99 | 2.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 1 | 159 | 4.0E-14 |
| sp|Q06593|OPT2_YEAST | Oligopeptide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT2 PE=1 SV=1 | 3 | 173 | 9.0E-11 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 2 | 100 | 9.0E-10 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 3 | 136 | 4.0E-08 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 2 | 99 | 2.0E-07 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 6 | 162 | 2.0E-07 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 1 | 99 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 80 | 99 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|7002 MVPSFSTFNAAAGMFVTGFIVLAVWYSNTWNSGYLPINSNRIFDHFAKPYNVSAVLDERGMYHEERYLSYSAPYT TAAKALVYGFFFASYSAVVTHVALHHRYEFKMGLLSLFKELQFSKLLVKLRLRKPSPDDEPVTPSQGQSEYRDIH NRLMAAYREGSRNGGICAPSSSP* |
| Coding | >OphauB2|7002 ATGGTGCCGTCCTTTTCCACCTTTAACGCGGCGGCGGGCATGTTTGTCACTGGCTTCATTGTGCTCGCCGTGTGG TACAGCAACACGTGGAACTCGGGCTATCTGCCCATCAACTCGAACCGCATCTTTGATCACTTTGCAAAGCCCTAC AATGTGTCGGCAGTGCTGGACGAGCGCGGCATGTACCATGAGGAGCGCTATCTCAGCTACTCGGCTCCCTACACC ACGGCGGCAAAGGCACTCGTCTATGGCTTCTTCTTTGCCAGCTACTCGGCTGTTGTGACTCATGTGGCCCTGCAC CACCGCTACGAGTTCAAGATGGGCCTCTTGAGCCTCTTCAAGGAACTGCAATTCAGCAAGCTGCTGGTCAAGCTC CGCCTGAGGAAGCCAAGCCCAGACGACGAGCCTGTGACGCCTAGCCAGGGACAGAGCGAGTACCGGGACATACAC AACCGCCTCATGGCTGCCTACCGAGAGGGTTCCCGCAATGGTGGTATTTGTGCACCCTCGTCATCTCCATAG |
| Transcript | >OphauB2|7002 ATGGTGCCGTCCTTTTCCACCTTTAACGCGGCGGCGGGCATGTTTGTCACTGGCTTCATTGTGCTCGCCGTGTGG TACAGCAACACGTGGAACTCGGGCTATCTGCCCATCAACTCGAACCGCATCTTTGATCACTTTGCAAAGCCCTAC AATGTGTCGGCAGTGCTGGACGAGCGCGGCATGTACCATGAGGAGCGCTATCTCAGCTACTCGGCTCCCTACACC ACGGCGGCAAAGGCACTCGTCTATGGCTTCTTCTTTGCCAGCTACTCGGCTGTTGTGACTCATGTGGCCCTGCAC CACCGCTACGAGTTCAAGATGGGCCTCTTGAGCCTCTTCAAGGAACTGCAATTCAGCAAGCTGCTGGTCAAGCTC CGCCTGAGGAAGCCAAGCCCAGACGACGAGCCTGTGACGCCTAGCCAGGGACAGAGCGAGTACCGGGACATACAC AACCGCCTCATGGCTGCCTACCGAGAGGGTTCCCGCAATGGTGGTATTTGTGCACCCTCGTCATCTCCATAG |
| Gene | >OphauB2|7002 ATGGTGCCGTCCTTTTCCACCTTTAACGCGGCGGCGGGCATGTTTGTCACTGGCTTCATTGTGCTCGCCGTGTGG TACAGCAACACGTGGAACTCGGGCTATCTGCCCATCAACTCGAACCGCATCTTTGATCACTTTGCAAAGCCCTAC AATGTGTCGGCAGTGCTGGACGAGCGCGGCATGTACCATGAGGAGCGCTATCTCAGCTACTCGGCTCCCTACACC ACGGCGGCAAAGGCACTCGTCTATGGCTTCTTCTTTGCCAGCTACTCGGCTGTTGTGACTCATGTGGCCCTGCAC CACCGCTACGAGTTCAAGATGGGCCTCTTGAGCCTCTTCAAGGAACTGCAATTCAGCAAGCTGCTGGTCAAGCTC CGCCTGAGGAAGCCAAGCCCAGACGACGAGCCTGTGACGCCTAGCCAGGGACAGAGCGAGTACCGGGACATACAC AACCGCCTCATGGCTGCCTACCGAGAGGGTGTGTGGCCTGGATGCCAGCTTGCCGTCTTGCATCCTGCTAATCCG CAGAGCATAGTCCCGCAATGGTGGTATTTGTGCACCCTCGTCATCTCCATAG |