© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6894 |
| Gene name | |
| Location | Contig_68:60738..62621 |
| Strand | + |
| Gene length (bp) | 1883 |
| Transcript length (bp) | 1770 |
| Coding sequence length (bp) | 1770 |
| Protein length (aa) | 590 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.0E-12 | 29 | 145 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.8E-09 | 211 | 470 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 85 | 107 | 22 |
| 3 | 117 | 139 | 22 |
| 4 | 210 | 232 | 22 |
| 5 | 247 | 269 | 22 |
| 6 | 335 | 357 | 22 |
| 7 | 383 | 405 | 22 |
| 8 | 412 | 431 | 19 |
| 9 | 451 | 473 | 22 |
| 10 | 531 | 553 | 22 |
| 11 | 563 | 580 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6894 MPSSLARLLPFSPSTTPTQAVTYLLGISLFSISFLVFLNSSVSFVITDLIGQKHGVGDVVGTLGFVDELVALVAC PAWGLVSDRLGVRWVATLGYSIIAVALAVFVQAKNVYPQLLLARLLFAVGASAAATMVTAILPSLTHESDDGVSS TASQDSRAKPNPRLSAAYSVESEATITPERYTRSLSAGSPSNRSGIQTSPSQYHSKPSALAGLVGLFTGCGALVA LALFLPLPARFGELDGVTPGQAVSYSFYSVAAVSLLVAIFVFVGLRNLRGEDAKGWRVLLSMGSGRDEGEASDMA VSHKQAVIPYLRLVKDSVILGFTDSQIALGYIGGFVARASTVAISLFIPLYVNTFFISNGYCQGSPNDPSPELKK ECRAAYVLSSILTGVAQLAGLLCAPIFGYLSGRSRRINFPIVIATVFGLIGYIILPRLPSPEMKNEQGRGGGLSI LVVVALIGVSQIGAIVCSLGSLGQGVLHVVDRRPRSAARHGVSGMPDDDEVDETDPEPEAQPLIGSAVGDSASRV RLKGSIAGVYSLCGGAAILILTKLGGILFDRVSQGAPFYMMAVFNGVLLAASLLMDASKAFSRT* |
| Coding | >OphauB2|6894 ATGCCATCGTCACTGGCGCGTCTGCTGCCATTTTCACCATCAACCACGCCCACGCAGGCCGTGACGTATCTCCTC GGCATTTCTCTCTTCTCCATCTCCTTTCTCGTCTTTTTAAACAGCTCCGTCTCGTTTGTCATTACCGATCTCATC GGCCAAAAGCATGGTGTCGGCGACGTCGTGGGCACTCTGGGCTTTGTCGACGAGCTGGTTGCTCTGGTTGCCTGT CCGGCCTGGGGACTAGTGTCAGACCGGCTGGGCGTGCGATGGGTAGCAACGCTGGGCTATAGCATTATTGCCGTT GCCCTGGCAGTTTTTGTCCAGGCCAAGAATGTCTATCCGCAGCTGCTGCTTGCACGCCTCTTGTTTGCCGTTGGG GCCTCGGCCGCGGCCACAATGGTGACGGCAATACTGCCCTCGCTCACTCACGAGTCAGATGACGGCGTCTCGTCG ACGGCCAGCCAAGACTCGAGGGCCAAGCCGAATCCTCGCCTTAGTGCCGCCTACTCTGTCGAGTCCGAGGCCACC ATTACTCCTGAGCGATATACCCGCAGCTTGTCTGCTGGGTCCCCGTCGAACCGCAGCGGAATCCAGACTTCGCCC TCGCAGTATCACAGCAAGCCATCTGCACTAGCTGGCCTGGTAGGCCTGTTTACCGGCTGCGGCGCCCTCGTTGCG TTGGCTCTGTTCCTCCCCTTGCCGGCGCGCTTTGGTGAATTGGACGGCGTGACACCAGGCCAGGCAGTGTCGTAC AGCTTTTACTCCGTTGCCGCCGTCTCGCTCCTTGTTGCGATTTTCGTCTTTGTTGGCCTGCGCAACCTCCGAGGC GAGGATGCCAAGGGCTGGCGGGTGCTACTGAGCATGGGGAGCGGGCGAGACGAGGGCGAGGCTTCCGACATGGCC GTGTCTCACAAACAGGCCGTCATTCCATACCTTCGTCTAGTCAAGGACTCGGTCATTTTGGGATTTACCGACTCG CAAATTGCTCTGGGCTATATCGGCGGCTTTGTTGCTAGAGCATCTACAGTTGCCATTTCGCTCTTTATTCCTCTC TATGTCAACACCTTCTTCATCAGTAACGGCTATTGCCAAGGCTCTCCCAATGATCCGTCCCCGGAACTTAAAAAG GAGTGTCGGGCAGCATATGTCTTGTCGTCAATTCTGACTGGAGTTGCACAGCTGGCCGGCCTGCTATGCGCTCCT ATATTTGGATATCTATCAGGCCGCAGCCGTCGCATCAACTTTCCCATTGTCATTGCCACCGTCTTTGGTTTGATT GGCTATATAATCTTGCCAAGGCTGCCGAGCCCCGAGATGAAGAATGAGCAAGGGCGAGGAGGAGGCCTATCCATC CTAGTCGTCGTGGCGCTCATTGGCGTCAGTCAGATTGGAGCCATTGTATGCAGTCTGGGCTCGCTGGGCCAGGGC GTGCTGCACGTTGTGGACAGAAGGCCACGGTCAGCAGCCCGCCACGGCGTATCCGGTATGCCCGATGATGATGAA GTGGACGAGACCGACCCAGAGCCAGAGGCGCAGCCATTGATTGGATCCGCGGTAGGCGACTCGGCGTCGCGAGTG CGACTCAAGGGCTCTATTGCAGGTGTCTACTCGTTATGTGGCGGTGCGGCCATTCTCATCTTGACCAAGCTGGGC GGCATACTATTTGACCGCGTTTCTCAAGGAGCCCCCTTTTACATGATGGCTGTCTTTAATGGCGTCTTGTTAGCT GCCAGCCTGCTCATGGATGCATCCAAGGCCTTTTCGCGCACTTAG |
| Transcript | >OphauB2|6894 ATGCCATCGTCACTGGCGCGTCTGCTGCCATTTTCACCATCAACCACGCCCACGCAGGCCGTGACGTATCTCCTC GGCATTTCTCTCTTCTCCATCTCCTTTCTCGTCTTTTTAAACAGCTCCGTCTCGTTTGTCATTACCGATCTCATC GGCCAAAAGCATGGTGTCGGCGACGTCGTGGGCACTCTGGGCTTTGTCGACGAGCTGGTTGCTCTGGTTGCCTGT CCGGCCTGGGGACTAGTGTCAGACCGGCTGGGCGTGCGATGGGTAGCAACGCTGGGCTATAGCATTATTGCCGTT GCCCTGGCAGTTTTTGTCCAGGCCAAGAATGTCTATCCGCAGCTGCTGCTTGCACGCCTCTTGTTTGCCGTTGGG GCCTCGGCCGCGGCCACAATGGTGACGGCAATACTGCCCTCGCTCACTCACGAGTCAGATGACGGCGTCTCGTCG ACGGCCAGCCAAGACTCGAGGGCCAAGCCGAATCCTCGCCTTAGTGCCGCCTACTCTGTCGAGTCCGAGGCCACC ATTACTCCTGAGCGATATACCCGCAGCTTGTCTGCTGGGTCCCCGTCGAACCGCAGCGGAATCCAGACTTCGCCC TCGCAGTATCACAGCAAGCCATCTGCACTAGCTGGCCTGGTAGGCCTGTTTACCGGCTGCGGCGCCCTCGTTGCG TTGGCTCTGTTCCTCCCCTTGCCGGCGCGCTTTGGTGAATTGGACGGCGTGACACCAGGCCAGGCAGTGTCGTAC AGCTTTTACTCCGTTGCCGCCGTCTCGCTCCTTGTTGCGATTTTCGTCTTTGTTGGCCTGCGCAACCTCCGAGGC GAGGATGCCAAGGGCTGGCGGGTGCTACTGAGCATGGGGAGCGGGCGAGACGAGGGCGAGGCTTCCGACATGGCC GTGTCTCACAAACAGGCCGTCATTCCATACCTTCGTCTAGTCAAGGACTCGGTCATTTTGGGATTTACCGACTCG CAAATTGCTCTGGGCTATATCGGCGGCTTTGTTGCTAGAGCATCTACAGTTGCCATTTCGCTCTTTATTCCTCTC TATGTCAACACCTTCTTCATCAGTAACGGCTATTGCCAAGGCTCTCCCAATGATCCGTCCCCGGAACTTAAAAAG GAGTGTCGGGCAGCATATGTCTTGTCGTCAATTCTGACTGGAGTTGCACAGCTGGCCGGCCTGCTATGCGCTCCT ATATTTGGATATCTATCAGGCCGCAGCCGTCGCATCAACTTTCCCATTGTCATTGCCACCGTCTTTGGTTTGATT GGCTATATAATCTTGCCAAGGCTGCCGAGCCCCGAGATGAAGAATGAGCAAGGGCGAGGAGGAGGCCTATCCATC CTAGTCGTCGTGGCGCTCATTGGCGTCAGTCAGATTGGAGCCATTGTATGCAGTCTGGGCTCGCTGGGCCAGGGC GTGCTGCACGTTGTGGACAGAAGGCCACGGTCAGCAGCCCGCCACGGCGTATCCGGTATGCCCGATGATGATGAA GTGGACGAGACCGACCCAGAGCCAGAGGCGCAGCCATTGATTGGATCCGCGGTAGGCGACTCGGCGTCGCGAGTG CGACTCAAGGGCTCTATTGCAGGTGTCTACTCGTTATGTGGCGGTGCGGCCATTCTCATCTTGACCAAGCTGGGC GGCATACTATTTGACCGCGTTTCTCAAGGAGCCCCCTTTTACATGATGGCTGTCTTTAATGGCGTCTTGTTAGCT GCCAGCCTGCTCATGGATGCATCCAAGGCCTTTTCGCGCACTTAG |
| Gene | >OphauB2|6894 ATGCCATCGTCACTGGCGCGTCTGCTGCCATTTTCACCATCAACCACGCCCACGCAGGCCGTGACGTATCTCCTC GGCATTTCTCTCTTCTCCATCTCCTTTCTCGTCTTTTTAAACAGCTCCGTCTCGTTTGTCATTACCGATCTCATC GGCCAAAAGCATGGTGTCGGCGACGTCGTGGGCACTCTGGGCTTTGTCGACGAGCTGGTTGCTCTGGTTGCCTGT CCGGCCTGGGGACTAGTGTCAGACCGGCTGGGCGTGCGATGGGTAGCAACGCTGGGCTATAGCATTATTGCCGTT GCCCTGGCAGTTTTTGTCCAGGCCAAGAATGTCTATCCGCAGCTGCTGCTTGCACGCCTCTTGTTTGCCGTTGGG GCCTCGGCCGCGTAGGTGCAATCATGTTTGACCTTTATGGGAGGCTGGGCTGACGAGCAACGCATCAAAAGGGCC ACAATGGTGACGGCAATACTGCCCTCGCTCACTCACGAGTCAGATGACGGCGTCTCGTCGACGGCCAGCCAAGAC TCGAGGGCCAAGCCGAATCCTCGCCTTAGTGCCGCCTACTCTGTCGAGTCCGAGGCCACCATTACTCCTGAGCGA TATACCCGCAGCTTGTCTGCTGGGTCCCCGTCGAACCGCAGCGGAATCCAGACTTCGCCCTCGCAGTATCACAGC AAGCCATCTGCACTAGCTGGCCTGGTAGGCCTGTTTACCGGCTGCGGCGCCCTCGTTGCGTTGGCTCTGTTCCTC CCCTTGCCGGCGCGCTTTGGTGAATTGGACGGCGTGACACCAGGCCAGGCAGTGTCGTACAGCTTTTACTCCGTT GCCGCCGTCTCGCTCCTTGTTGCGATTTTCGTCTTTGTTGGCCTGCGCAACCTCCGAGGCGAGGATGCCAAGGGC TGGCGGGTGCTACTGAGCATGGGGAGCGGGCGAGACGAGGGCGAGGCTTCCGACATGGCCGTGTCTCACAAACAG GTCAGTCTGCAATTTGCCTCACCAGGCTTGTCGGTGCTGATGATTGCTGCTAGGCCGTCATTCCATACCTTCGTC TAGTCAAGGACTCGGTCATTTTGGGATTTACCGACTCGCAAATTGCTCTGGGCTATATCGGCGGCTTTGTTGCTA GAGCATCTACAGTTGCCATTTCGCTCTTTATTCCTCTCTATGTCAACACCTTCTTCATCAGTAACGGCTATTGCC AAGGCTCTCCCAATGATCCGTCCCCGGAACTTAAAAAGGAGTGTCGGGCAGCATATGTCTTGTCGTCAATTCTGA CTGGAGTTGCACAGCTGGCCGGCCTGCTATGCGCTCCTATATTTGGATATCTATCAGGCCGCAGCCGTCGCATCA ACTTTCCCATTGTCATTGCCACCGTCTTTGGTTTGATTGGCTATATAATCTTGCCAAGGCTGCCGAGCCCCGAGA TGAAGAATGAGCAAGGGCGAGGAGGAGGCCTATCCATCCTAGTCGTCGTGGCGCTCATTGGCGTCAGTCAGATTG GAGCCATTGTATGCAGTCTGGGCTCGCTGGGCCAGGGCGTGCTGCACGTTGTGGACAGAAGGCCACGGTCAGCAG CCCGCCACGGCGTATCCGGTATGCCCGATGATGATGAAGTGGACGAGACCGACCCAGAGCCAGAGGCGCAGCCAT TGATTGGATCCGCGGTAGGCGACTCGGCGTCGCGAGTGCGACTCAAGGGCTCTATTGCAGGTGTCTACTCGTTAT GTGGCGGTGCGGCCATTCTCATCTTGACCAAGCTGGGCGGCATACTATTTGACCGCGTTTCTCAAGGAGCCCCCT TTTACATGATGGCTGTCTTTAATGGCGTCTTGTTAGCTGCCAGCCTGCTCATGGATGCATCCAAGGCCTTTTCGC GCACTTAG |