Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6880
Gene name
LocationContig_68:11917..14262
Strand+
Gene length (bp)2345
Transcript length (bp)2277
Coding sequence length (bp)2277
Protein length (aa) 759

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08167 RIX1 rRNA processing/ribosome biogenesis 1.8E-60 9 211

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P87243|RIX1_SCHPO Pre-rRNA-processing protein rix1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rix1 PE=1 SV=1 66 267 7.0E-15

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3429
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3449
Ophiocordyceps australis map64 (Brazil) OphauB2|6880 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|07093
Ophiocordyceps camponoti-rufipedis Ophun1|7058
Ophiocordyceps kimflemingae Ophio5|5325
Ophiocordyceps subramaniannii Hirsu2|6510

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6880
MSSQPPPDLGVLCRKLTSTPAVQLPHALPALTRHVVRCKDALSAPQDQKLKDNASQSSLLLHKIKTQITTLLNGR
SREGRFAAVGLVKAVIDVGGWEMLRGSEPWLRSLLSILQKGDSFACKEMAVVTLTRIYMLLHPYPTLAREIATAT
LPAFITASLQIVKSDGRPLSIVETVCDAFAALIPLYPTTFRPQASQIPSAIRLYLAPTMSDAVFIPPSLQRAAGR
LTVTLHHVAAKSGGSDEWAKLMDGFLRNLHLTADQVFRAVDEAWEVKGNFQRATVALDGVPSGGGVSADQLPPWQ
GLSAGAERIMGLLGLVSDALCCPTKGAVEIPLGAIMTAISRICSIARLLPKSQSWHEAVETNPAIGRDEKDELWS
VMPDLHVRAMQVVLVMLRRLQQNMLPLVQELLDHVVRVFKSGMDVATVRKTGYLLFANLLSLAGPTLSKQSVVML
ELLAIACCRDLQHNASLSNKPASMPATDAKANTVANADLFLQPCSASSAAVAITKLDQDHAAAATHLLPVLLSRL
PQQHIKPSLRGLMDRTAILTRNRDAMLASVLNPYRDSSGRMFPSILPHLSRQFPHDQALEILRCNMRTSSAMGSG
SHATVAEVPNHGINDDTSRSDVAMASVDKEQDLKSEGRHDGIKVEPESVASEGNSKSAALIAPPPLKANLAVQSS
AFLPRASSTTGTLLSDSQPKRKHPGPDACPAKRQEIEKPAPVQTLQQEQLAANEDDSDESVHLNMELDEDQDEVE
ESEQEGQE*
Coding >OphauB2|6880
ATGTCGTCGCAGCCTCCCCCCGACCTCGGGGTTCTTTGTAGGAAGCTCACCTCGACGCCTGCTGTGCAGCTTCCT
CATGCCCTTCCTGCTCTGACGCGGCACGTGGTGCGCTGCAAAGATGCCCTGTCGGCGCCCCAGGACCAAAAGCTC
AAAGACAATGCCTCACAGAGCTCGCTGCTCCTTCACAAAATCAAGACGCAAATCACTACACTGTTGAATGGGCGC
AGTCGTGAGGGCAGGTTTGCCGCCGTGGGCTTGGTCAAGGCCGTGATTGATGTCGGAGGCTGGGAAATGCTTCGC
GGCTCTGAGCCTTGGCTTCGCAGCCTCTTGTCTATTCTGCAGAAAGGAGACTCGTTTGCTTGCAAAGAAATGGCC
GTTGTGACTCTGACTCGCATTTACATGCTGCTTCACCCTTATCCAACACTGGCGAGGGAAATAGCAACTGCTACG
CTTCCGGCCTTTATTACGGCCAGTCTCCAAATAGTCAAGTCTGATGGCCGCCCTCTTTCAATTGTCGAGACGGTA
TGCGACGCCTTTGCAGCCCTCATACCGCTTTACCCTACAACCTTTCGCCCGCAAGCCTCTCAGATCCCATCAGCC
ATCAGGCTATATCTTGCGCCGACAATGTCGGATGCAGTCTTTATTCCTCCATCTCTACAGCGTGCTGCGGGCCGA
CTGACCGTCACCCTCCATCACGTCGCTGCAAAGTCGGGTGGCAGCGATGAATGGGCCAAGCTCATGGACGGCTTC
TTGCGCAACCTTCACCTGACGGCTGACCAAGTCTTTCGCGCCGTCGACGAGGCCTGGGAAGTTAAAGGCAACTTT
CAGCGGGCTACCGTGGCCCTGGATGGAGTCCCTAGCGGAGGAGGCGTCTCCGCAGACCAATTGCCTCCCTGGCAA
GGCCTGAGCGCCGGTGCCGAGCGCATCATGGGACTGCTTGGTCTCGTGTCAGACGCCTTGTGCTGCCCAACTAAA
GGAGCTGTTGAGATTCCTCTGGGAGCCATAATGACTGCAATTTCTCGCATTTGCTCCATAGCCCGGCTTTTGCCA
AAGTCTCAAAGCTGGCATGAGGCTGTCGAGACAAATCCTGCCATAGGCAGAGACGAGAAGGACGAGCTCTGGAGT
GTCATGCCCGACCTCCACGTGCGAGCCATGCAAGTAGTCCTGGTGATGCTGCGCAGACTTCAACAAAACATGCTC
CCTCTGGTCCAGGAGCTGTTGGACCATGTCGTCCGCGTCTTCAAGTCGGGCATGGACGTTGCCACGGTCCGCAAG
ACTGGCTATCTCCTCTTCGCCAACCTTTTATCCCTGGCCGGCCCAACCCTGTCAAAGCAATCGGTAGTCATGCTG
GAGCTCCTCGCCATCGCCTGCTGCCGCGACTTGCAGCACAATGCCTCTCTCAGCAACAAGCCAGCGTCGATGCCA
GCCACAGACGCCAAGGCAAATACGGTGGCCAACGCCGACCTCTTTCTACAACCATGCTCAGCTTCGTCCGCAGCA
GTGGCAATCACCAAGCTTGACCAGGATCACGCTGCCGCTGCTACCCATCTCCTGCCTGTACTGCTATCCCGTCTC
CCGCAACAACACATCAAGCCCTCGCTTCGCGGCCTCATGGACAGAACGGCCATTCTTACGCGCAATCGTGACGCT
ATGCTTGCCAGCGTGCTTAATCCCTATCGCGACAGCAGCGGGCGCATGTTTCCTTCTATTCTGCCTCATCTCTCG
CGTCAGTTTCCTCACGACCAGGCACTCGAAATACTGCGTTGCAACATGCGCACCTCGTCTGCAATGGGCAGCGGC
TCGCATGCGACAGTGGCCGAGGTGCCCAACCATGGCATAAACGATGACACGAGCCGTAGTGATGTTGCCATGGCC
AGCGTGGACAAGGAACAAGACTTGAAAAGTGAGGGCAGACATGATGGAATCAAGGTTGAGCCCGAATCCGTCGCG
AGTGAGGGCAACTCAAAGTCTGCTGCTTTGATTGCGCCTCCTCCGCTCAAAGCCAACCTTGCAGTTCAGAGCAGT
GCCTTTCTCCCTAGAGCATCGTCAACCACGGGCACTTTATTGAGTGATTCACAACCCAAGCGCAAGCACCCTGGC
CCAGATGCTTGTCCGGCAAAGCGACAGGAAATAGAAAAACCTGCGCCAGTCCAAACTCTCCAACAGGAACAACTG
GCAGCCAACGAGGACGACAGCGACGAGAGCGTGCACCTCAATATGGAACTAGACGAGGACCAAGACGAAGTCGAG
GAAAGCGAACAAGAGGGCCAAGAGTGA
Transcript >OphauB2|6880
ATGTCGTCGCAGCCTCCCCCCGACCTCGGGGTTCTTTGTAGGAAGCTCACCTCGACGCCTGCTGTGCAGCTTCCT
CATGCCCTTCCTGCTCTGACGCGGCACGTGGTGCGCTGCAAAGATGCCCTGTCGGCGCCCCAGGACCAAAAGCTC
AAAGACAATGCCTCACAGAGCTCGCTGCTCCTTCACAAAATCAAGACGCAAATCACTACACTGTTGAATGGGCGC
AGTCGTGAGGGCAGGTTTGCCGCCGTGGGCTTGGTCAAGGCCGTGATTGATGTCGGAGGCTGGGAAATGCTTCGC
GGCTCTGAGCCTTGGCTTCGCAGCCTCTTGTCTATTCTGCAGAAAGGAGACTCGTTTGCTTGCAAAGAAATGGCC
GTTGTGACTCTGACTCGCATTTACATGCTGCTTCACCCTTATCCAACACTGGCGAGGGAAATAGCAACTGCTACG
CTTCCGGCCTTTATTACGGCCAGTCTCCAAATAGTCAAGTCTGATGGCCGCCCTCTTTCAATTGTCGAGACGGTA
TGCGACGCCTTTGCAGCCCTCATACCGCTTTACCCTACAACCTTTCGCCCGCAAGCCTCTCAGATCCCATCAGCC
ATCAGGCTATATCTTGCGCCGACAATGTCGGATGCAGTCTTTATTCCTCCATCTCTACAGCGTGCTGCGGGCCGA
CTGACCGTCACCCTCCATCACGTCGCTGCAAAGTCGGGTGGCAGCGATGAATGGGCCAAGCTCATGGACGGCTTC
TTGCGCAACCTTCACCTGACGGCTGACCAAGTCTTTCGCGCCGTCGACGAGGCCTGGGAAGTTAAAGGCAACTTT
CAGCGGGCTACCGTGGCCCTGGATGGAGTCCCTAGCGGAGGAGGCGTCTCCGCAGACCAATTGCCTCCCTGGCAA
GGCCTGAGCGCCGGTGCCGAGCGCATCATGGGACTGCTTGGTCTCGTGTCAGACGCCTTGTGCTGCCCAACTAAA
GGAGCTGTTGAGATTCCTCTGGGAGCCATAATGACTGCAATTTCTCGCATTTGCTCCATAGCCCGGCTTTTGCCA
AAGTCTCAAAGCTGGCATGAGGCTGTCGAGACAAATCCTGCCATAGGCAGAGACGAGAAGGACGAGCTCTGGAGT
GTCATGCCCGACCTCCACGTGCGAGCCATGCAAGTAGTCCTGGTGATGCTGCGCAGACTTCAACAAAACATGCTC
CCTCTGGTCCAGGAGCTGTTGGACCATGTCGTCCGCGTCTTCAAGTCGGGCATGGACGTTGCCACGGTCCGCAAG
ACTGGCTATCTCCTCTTCGCCAACCTTTTATCCCTGGCCGGCCCAACCCTGTCAAAGCAATCGGTAGTCATGCTG
GAGCTCCTCGCCATCGCCTGCTGCCGCGACTTGCAGCACAATGCCTCTCTCAGCAACAAGCCAGCGTCGATGCCA
GCCACAGACGCCAAGGCAAATACGGTGGCCAACGCCGACCTCTTTCTACAACCATGCTCAGCTTCGTCCGCAGCA
GTGGCAATCACCAAGCTTGACCAGGATCACGCTGCCGCTGCTACCCATCTCCTGCCTGTACTGCTATCCCGTCTC
CCGCAACAACACATCAAGCCCTCGCTTCGCGGCCTCATGGACAGAACGGCCATTCTTACGCGCAATCGTGACGCT
ATGCTTGCCAGCGTGCTTAATCCCTATCGCGACAGCAGCGGGCGCATGTTTCCTTCTATTCTGCCTCATCTCTCG
CGTCAGTTTCCTCACGACCAGGCACTCGAAATACTGCGTTGCAACATGCGCACCTCGTCTGCAATGGGCAGCGGC
TCGCATGCGACAGTGGCCGAGGTGCCCAACCATGGCATAAACGATGACACGAGCCGTAGTGATGTTGCCATGGCC
AGCGTGGACAAGGAACAAGACTTGAAAAGTGAGGGCAGACATGATGGAATCAAGGTTGAGCCCGAATCCGTCGCG
AGTGAGGGCAACTCAAAGTCTGCTGCTTTGATTGCGCCTCCTCCGCTCAAAGCCAACCTTGCAGTTCAGAGCAGT
GCCTTTCTCCCTAGAGCATCGTCAACCACGGGCACTTTATTGAGTGATTCACAACCCAAGCGCAAGCACCCTGGC
CCAGATGCTTGTCCGGCAAAGCGACAGGAAATAGAAAAACCTGCGCCAGTCCAAACTCTCCAACAGGAACAACTG
GCAGCCAACGAGGACGACAGCGACGAGAGCGTGCACCTCAATATGGAACTAGACGAGGACCAAGACGAAGTCGAG
GAAAGCGAACAAGAGGGCCAAGAGTGA
Gene >OphauB2|6880
ATGTCGTCGCAGCCTCCCCCCGACCTCGGGGTTCTTTGTAGGAAGCTCACCTCGACGCCTGCTGTGCAGCTTCCT
CATGCCCTTCCTGCTCTGACGCGGCACGTGGTGCGCTGCAAAGATGCCCTGTCGGCGCCCCAGGACCAAAAGCTC
AAAGACAATGCCTCACAGAGCTCGCTGCTCCTTCACAAAATCAAGACGCAAATCACTACACTGTTGAATGGGCGC
AGTCGTGAGGGCAGGTTTGCCGCCGTGGGCTTGGTCAAGGCCGTGATTGATGTCGGAGGCTGGGAAATGCTTCGC
GGCTCTGAGCCTTGGCTTCGCAGCCTCTTGTCTATTCTGCAGGTTAGCTCTCGTCCACATGTCAAAGCCATGCTG
CTACTCATGCTTATCTTCTCATTTCGTCCGGCAAGAAAGGAGACTCGTTTGCTTGCAAAGAAATGGCCGTTGTGA
CTCTGACTCGCATTTACATGCTGCTTCACCCTTATCCAACACTGGCGAGGGAAATAGCAACTGCTACGCTTCCGG
CCTTTATTACGGCCAGTCTCCAAATAGTCAAGTCTGATGGCCGCCCTCTTTCAATTGTCGAGACGGTATGCGACG
CCTTTGCAGCCCTCATACCGCTTTACCCTACAACCTTTCGCCCGCAAGCCTCTCAGATCCCATCAGCCATCAGGC
TATATCTTGCGCCGACAATGTCGGATGCAGTCTTTATTCCTCCATCTCTACAGCGTGCTGCGGGCCGACTGACCG
TCACCCTCCATCACGTCGCTGCAAAGTCGGGTGGCAGCGATGAATGGGCCAAGCTCATGGACGGCTTCTTGCGCA
ACCTTCACCTGACGGCTGACCAAGTCTTTCGCGCCGTCGACGAGGCCTGGGAAGTTAAAGGCAACTTTCAGCGGG
CTACCGTGGCCCTGGATGGAGTCCCTAGCGGAGGAGGCGTCTCCGCAGACCAATTGCCTCCCTGGCAAGGCCTGA
GCGCCGGTGCCGAGCGCATCATGGGACTGCTTGGTCTCGTGTCAGACGCCTTGTGCTGCCCAACTAAAGGAGCTG
TTGAGATTCCTCTGGGAGCCATAATGACTGCAATTTCTCGCATTTGCTCCATAGCCCGGCTTTTGCCAAAGTCTC
AAAGCTGGCATGAGGCTGTCGAGACAAATCCTGCCATAGGCAGAGACGAGAAGGACGAGCTCTGGAGTGTCATGC
CCGACCTCCACGTGCGAGCCATGCAAGTAGTCCTGGTGATGCTGCGCAGACTTCAACAAAACATGCTCCCTCTGG
TCCAGGAGCTGTTGGACCATGTCGTCCGCGTCTTCAAGTCGGGCATGGACGTTGCCACGGTCCGCAAGACTGGCT
ATCTCCTCTTCGCCAACCTTTTATCCCTGGCCGGCCCAACCCTGTCAAAGCAATCGGTAGTCATGCTGGAGCTCC
TCGCCATCGCCTGCTGCCGCGACTTGCAGCACAATGCCTCTCTCAGCAACAAGCCAGCGTCGATGCCAGCCACAG
ACGCCAAGGCAAATACGGTGGCCAACGCCGACCTCTTTCTACAACCATGCTCAGCTTCGTCCGCAGCAGTGGCAA
TCACCAAGCTTGACCAGGATCACGCTGCCGCTGCTACCCATCTCCTGCCTGTACTGCTATCCCGTCTCCCGCAAC
AACACATCAAGCCCTCGCTTCGCGGCCTCATGGACAGAACGGCCATTCTTACGCGCAATCGTGACGCTATGCTTG
CCAGCGTGCTTAATCCCTATCGCGACAGCAGCGGGCGCATGTTTCCTTCTATTCTGCCTCATCTCTCGCGTCAGT
TTCCTCACGACCAGGCACTCGAAATACTGCGTTGCAACATGCGCACCTCGTCTGCAATGGGCAGCGGCTCGCATG
CGACAGTGGCCGAGGTGCCCAACCATGGCATAAACGATGACACGAGCCGTAGTGATGTTGCCATGGCCAGCGTGG
ACAAGGAACAAGACTTGAAAAGTGAGGGCAGACATGATGGAATCAAGGTTGAGCCCGAATCCGTCGCGAGTGAGG
GCAACTCAAAGTCTGCTGCTTTGATTGCGCCTCCTCCGCTCAAAGCCAACCTTGCAGTTCAGAGCAGTGCCTTTC
TCCCTAGAGCATCGTCAACCACGGGCACTTTATTGAGTGATTCACAACCCAAGCGCAAGCACCCTGGCCCAGATG
CTTGTCCGGCAAAGCGACAGGAAATAGAAAAACCTGCGCCAGTCCAAACTCTCCAACAGGAACAACTGGCAGCCA
ACGAGGACGACAGCGACGAGAGCGTGCACCTCAATATGGAACTAGACGAGGACCAAGACGAAGTCGAGGAAAGCG
AACAAGAGGGCCAAGAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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