Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6872
Gene name
LocationContig_67:89312..90789
Strand-
Gene length (bp)1477
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07571 TAF6_C TAF6 C-terminal HEAT repeat domain 3.4E-26 290 382
PF02969 TAF TATA box binding protein associated factor (TAF) 4.3E-17 18 80

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74462|TAF6_SCHPO Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf6 PE=1 SV=1 17 397 3.0E-113
sp|P53040|TAF6_YEAST Transcription initiation factor TFIID subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF6 PE=1 SV=1 17 447 6.0E-84
sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6 OS=Arabidopsis thaliana GN=TAF6 PE=1 SV=1 21 391 2.0E-71
sp|Q91857|TAF6_XENLA Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis GN=taf6 PE=2 SV=3 10 381 1.0E-53
sp|P49848|TAF6_HUMAN Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=1 20 382 5.0E-53
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Swissprot ID Swissprot Description Start End E-value
sp|O74462|TAF6_SCHPO Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf6 PE=1 SV=1 17 397 3.0E-113
sp|P53040|TAF6_YEAST Transcription initiation factor TFIID subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF6 PE=1 SV=1 17 447 6.0E-84
sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6 OS=Arabidopsis thaliana GN=TAF6 PE=1 SV=1 21 391 2.0E-71
sp|Q91857|TAF6_XENLA Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis GN=taf6 PE=2 SV=3 10 381 1.0E-53
sp|P49848|TAF6_HUMAN Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=1 20 382 5.0E-53
sp|Q62311|TAF6_MOUSE Transcription initiation factor TFIID subunit 6 OS=Mus musculus GN=Taf6 PE=1 SV=1 20 382 1.0E-52
sp|Q63801|TAF6_RAT Transcription initiation factor TFIID subunit 6 OS=Rattus norvegicus GN=Taf6 PE=1 SV=1 20 382 1.0E-52
sp|F4HVA6|TAF6B_ARATH Transcription initiation factor TFIID subunit 6b OS=Arabidopsis thaliana GN=TAF6B PE=1 SV=1 21 455 2.0E-51
sp|P49847|TAF6_DROME Transcription initiation factor TFIID subunit 6 OS=Drosophila melanogaster GN=Taf6 PE=1 SV=2 19 455 2.0E-46
sp|Q8R2K4|TAF6L_MOUSE TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus GN=Taf6l PE=2 SV=1 21 376 1.0E-24
sp|Q9Y6J9|TAF6L_HUMAN TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Homo sapiens GN=TAF6L PE=1 SV=1 21 376 4.0E-24
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GO

GO Term Description Terminal node
GO:0006367 transcription initiation from RNA polymerase II promoter Yes
GO:0006352 DNA-templated transcription, initiation Yes
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0008150 biological_process No
GO:0009059 macromolecule biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0009987 cellular process No
GO:0044238 primary metabolic process No
GO:0009058 biosynthetic process No
GO:0046483 heterocycle metabolic process No
GO:0016070 RNA metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1964
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2726
Ophiocordyceps australis map64 (Brazil) OphauB2|6872 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|01587
Ophiocordyceps camponoti-rufipedis Ophun1|958
Ophiocordyceps kimflemingae Ophio5|3274
Ophiocordyceps subramaniannii Hirsu2|2136

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6872
MTTTSIDPPATGKQRLLWNSENARDVAESVGINGLSDEAQKALTQDIEYRIGQVIAEGMRLMRAARRTELTVGDV
TLALRVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYLEDEEVDFEKIINAPLPRVSRDMMYTVHWLAIEGVQPSI
PQNPTLHEARTQDMLPKGPGAHPSLAALAGNDTGVNKPSVKHVVSKELILYFDKIQAALLDENPDDEVVRLRHAA
LGSVRDDPGLHQLVPYFVNFIMDRVTHHLDDIFTLHRMMELTTALIENHSLFLDPYASSLSSCTLTCLMARKLGS
EDGPDALARQYELRQLSASLVGRIAYKYAASNTLLRPKLTRTCLKYLLDPTRPAAVLYGAISGLFEAGGPEAVRV
LVLRNLKAFDAGILQPLREKAEGSMDYEMLVQGLVQAVTSLATSLQDADGDNAPATETELEALNGFIGPIIGQRV
ASLANRGLIKVILDARYLD*
Coding >OphauB2|6872
ATGACAACCACATCAATTGACCCCCCGGCGACCGGCAAGCAGCGCCTGCTCTGGAATTCGGAAAACGCCCGCGAC
GTTGCCGAGTCGGTGGGCATAAACGGCCTCAGCGATGAGGCTCAGAAGGCCCTGACCCAGGACATTGAGTACCGC
ATTGGCCAGGTCATTGCCGAGGGCATGCGTCTGATGCGCGCAGCGCGTCGCACCGAGCTGACTGTGGGAGATGTG
ACGCTGGCCCTGCGAGTGCTAGACGTGGAGCCACTCTATGGCTACGACTCGACGCGCCCACTGCGCTATGGCGAG
GCCAGTCTTGGCCCTGGCCAGCCGCTCTTTTACCTCGAGGACGAAGAGGTTGACTTTGAGAAAATCATCAACGCC
CCGTTGCCCAGGGTATCCCGAGACATGATGTATACTGTCCACTGGCTGGCTATCGAAGGCGTCCAGCCATCTATC
CCCCAAAATCCAACTCTTCATGAAGCGCGTACCCAAGACATGCTGCCCAAGGGTCCTGGCGCCCATCCCTCGCTC
GCTGCTCTCGCTGGAAACGACACGGGCGTCAACAAGCCATCGGTGAAGCACGTCGTTAGCAAAGAGCTCATTTTA
TACTTTGATAAGATCCAAGCGGCCTTGCTCGACGAGAACCCCGATGACGAAGTGGTGCGTCTGCGTCACGCGGCC
CTTGGCTCTGTGCGCGACGACCCTGGCCTCCACCAGCTCGTGCCGTATTTTGTAAACTTCATCATGGACCGCGTA
ACGCATCATCTGGACGACATCTTCACCTTGCATCGCATGATGGAGCTTACAACGGCACTCATTGAAAACCATTCC
TTGTTTCTCGACCCCTATGCGAGCTCCCTCTCCTCTTGCACCCTGACTTGCCTCATGGCTCGCAAGCTCGGTTCT
GAGGACGGTCCGGATGCGCTTGCCCGTCAGTACGAGCTGCGCCAACTATCCGCCTCTCTTGTCGGTCGCATTGCC
TACAAGTACGCTGCCTCCAACACACTGCTGCGCCCTAAATTGACCCGCACTTGCCTCAAGTATCTGCTGGATCCT
ACGCGTCCGGCGGCTGTACTCTATGGTGCCATTTCTGGCTTGTTTGAGGCTGGCGGACCCGAGGCTGTGCGCGTC
TTGGTCCTACGTAACCTCAAGGCCTTTGACGCTGGCATCCTGCAGCCGCTGCGTGAAAAGGCTGAAGGAAGCATG
GACTATGAGATGTTGGTGCAGGGACTTGTGCAAGCGGTTACGTCCTTGGCGACCTCTTTACAGGATGCTGACGGC
GATAATGCGCCAGCTACGGAAACTGAGCTGGAAGCACTAAATGGTTTCATTGGTCCTATAATTGGGCAGCGCGTT
GCGTCGCTTGCCAACCGAGGGCTCATTAAAGTCATTCTCGATGCTCGATACCTCGACTAG
Transcript >OphauB2|6872
ATGACAACCACATCAATTGACCCCCCGGCGACCGGCAAGCAGCGCCTGCTCTGGAATTCGGAAAACGCCCGCGAC
GTTGCCGAGTCGGTGGGCATAAACGGCCTCAGCGATGAGGCTCAGAAGGCCCTGACCCAGGACATTGAGTACCGC
ATTGGCCAGGTCATTGCCGAGGGCATGCGTCTGATGCGCGCAGCGCGTCGCACCGAGCTGACTGTGGGAGATGTG
ACGCTGGCCCTGCGAGTGCTAGACGTGGAGCCACTCTATGGCTACGACTCGACGCGCCCACTGCGCTATGGCGAG
GCCAGTCTTGGCCCTGGCCAGCCGCTCTTTTACCTCGAGGACGAAGAGGTTGACTTTGAGAAAATCATCAACGCC
CCGTTGCCCAGGGTATCCCGAGACATGATGTATACTGTCCACTGGCTGGCTATCGAAGGCGTCCAGCCATCTATC
CCCCAAAATCCAACTCTTCATGAAGCGCGTACCCAAGACATGCTGCCCAAGGGTCCTGGCGCCCATCCCTCGCTC
GCTGCTCTCGCTGGAAACGACACGGGCGTCAACAAGCCATCGGTGAAGCACGTCGTTAGCAAAGAGCTCATTTTA
TACTTTGATAAGATCCAAGCGGCCTTGCTCGACGAGAACCCCGATGACGAAGTGGTGCGTCTGCGTCACGCGGCC
CTTGGCTCTGTGCGCGACGACCCTGGCCTCCACCAGCTCGTGCCGTATTTTGTAAACTTCATCATGGACCGCGTA
ACGCATCATCTGGACGACATCTTCACCTTGCATCGCATGATGGAGCTTACAACGGCACTCATTGAAAACCATTCC
TTGTTTCTCGACCCCTATGCGAGCTCCCTCTCCTCTTGCACCCTGACTTGCCTCATGGCTCGCAAGCTCGGTTCT
GAGGACGGTCCGGATGCGCTTGCCCGTCAGTACGAGCTGCGCCAACTATCCGCCTCTCTTGTCGGTCGCATTGCC
TACAAGTACGCTGCCTCCAACACACTGCTGCGCCCTAAATTGACCCGCACTTGCCTCAAGTATCTGCTGGATCCT
ACGCGTCCGGCGGCTGTACTCTATGGTGCCATTTCTGGCTTGTTTGAGGCTGGCGGACCCGAGGCTGTGCGCGTC
TTGGTCCTACGTAACCTCAAGGCCTTTGACGCTGGCATCCTGCAGCCGCTGCGTGAAAAGGCTGAAGGAAGCATG
GACTATGAGATGTTGGTGCAGGGACTTGTGCAAGCGGTTACGTCCTTGGCGACCTCTTTACAGGATGCTGACGGC
GATAATGCGCCAGCTACGGAAACTGAGCTGGAAGCACTAAATGGTTTCATTGGTCCTATAATTGGGCAGCGCGTT
GCGTCGCTTGCCAACCGAGGGCTCATTAAAGTCATTCTCGATGCTCGATACCTCGACTAG
Gene >OphauB2|6872
ATGACAACCACATCAATTGACCCCCCGGCGACCGGCAAGCAGCGCCTGCTCTGGAATTCGGAAAACGCCCGCGAC
GTTGCCGAGTCGGTGGGCATAAACGGCCTCAGCGATGAGGCTCAGAAGGCCCTGACCCAGGACATTGAGTACCGC
ATTGGCCAGGTCATTGCCGAGGGCATGCGTCTGATGCGCGCAGCGCGTCGCACCGAGCTGACTGTGGGAGATGTG
ACGCTGGCCCTGCGAGTGCTAGACGTGGAGCCACTCTATGGCTACGACTCGACGCGCCCACTGCGCTATGGCGAG
GCCAGTCTTGGCCCTGGCCAGCCGCTCTTTTACCTCGAGGACGAAGAGGTTGACTTTGAGAAAATCATCAACGCC
CCGTTGCCCAGGGTATCCCGAGACATGATGTATACTGGTTCGTCTCTGCTCACCCAAAAAAAAAACGTTTGCTAG
AGTTGGTGTCGCTAATCCAAGGTGAATAGTCCACTGGCTGGCTATCGAAGGCGTCCAGCCATCTATCCCCCAAAA
TCCAACTCTTCATGAAGCGCGTACCCAAGACATGCTGCCCAAGGGTCCTGGCGCCCATCCCTCGCTCGCTGCTCT
CGCTGGAAACGACACGGGCGTCAACAAGCCATCGGTGAAGCACGTCGTTAGCAAAGAGCTCATTTTATACTTTGA
TAAGATCCAAGCGGCCTTGCTCGACGAGAACCCCGATGACGAAGTGGTGCGTCTGCGTCACGCGGCCCTTGGCTC
TGTGCGCGACGACCCTGGCCTCCACCAGCTCGTGCCGTATTTTGTAAACTTCATCATGGACCGCGTAACGCATCA
TCTGGACGACATCTTCACCTTGCATCGCATGATGGAGCTTACAACGGCACTCATTGAAAACCATTCCTTGTTTCT
CGACCCCTATGCGAGCTCCCTCTCCTCTTGCACCCTGACTTGCCTCATGGCTCGCAAGCTCGGTTCTGAGGACGG
TCCGGATGCGCTTGCCCGTCAGTACGAGCTGCGCCAACTATCCGCCTCTCTTGTCGGTCGCATTGCCTACAAGTA
CGCTGCCTCCAACACACTGCTGCGCCCTAAATTGACCCGCACTTGCCTCAAGTATCTGCTGGATCCTACGCGTCC
GGCGGCTGTACTCTATGGTGCCATTTCTGGCTTGTTTGAGGCTGGCGGACCCGAGGCTGTGCGCGTCTTGGTCCT
ACGTAACCTCAAGGCCTTTGACGCTGGCATCCTGCAGCCGCTGCGTGAAAAGGCTGAAGGAAGCATGGACTATGA
GATGTTGGTGCAGGGACTTGTGCAAGCGGTTACGTCCTTGGCGACCTCTTTACAGGATGCTGACGGCGATAATGC
GCCAGCTACGGAAACTGAGCTGGAAGCACTAAATGGTTTCATTGGTCCTATAATTGGGCAGCGCGTTGCGTCGCT
TGCCAACCGAGGGCTCATTAAAGTCATTCTCGATGCTCGATACCTCGACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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