© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6796 |
| Gene name | |
| Location | Contig_66:10913..13337 |
| Strand | - |
| Gene length (bp) | 2424 |
| Transcript length (bp) | 1791 |
| Coding sequence length (bp) | 1791 |
| Protein length (aa) | 597 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00018 | SH3_1 | SH3 domain | 2.7E-06 | 166 | 205 |
| PF00564 | PB1 | PB1 domain | 7.7E-10 | 518 | 585 |
| PF00787 | PX | PX domain | 9.1E-09 | 353 | 440 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40996|SCD2_SCHPO | Protein scd2/ral3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scd2 PE=3 SV=1 | 14 | 594 | 4.0E-86 |
| sp|P29366|BEM1_YEAST | Bud emergence protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BEM1 PE=1 SV=1 | 27 | 550 | 4.0E-60 |
| sp|Q5TCZ1|SPD2A_HUMAN | SH3 and PX domain-containing protein 2A OS=Homo sapiens GN=SH3PXD2A PE=1 SV=1 | 344 | 444 | 9.0E-13 |
| sp|O89032|SPD2A_MOUSE | SH3 and PX domain-containing protein 2A OS=Mus musculus GN=Sh3pxd2a PE=1 SV=2 | 344 | 444 | 1.0E-12 |
| sp|A2AAY5|SPD2B_MOUSE | SH3 and PX domain-containing protein 2B OS=Mus musculus GN=Sh3pxd2b PE=1 SV=1 | 344 | 444 | 2.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40996|SCD2_SCHPO | Protein scd2/ral3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scd2 PE=3 SV=1 | 14 | 594 | 4.0E-86 |
| sp|P29366|BEM1_YEAST | Bud emergence protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BEM1 PE=1 SV=1 | 27 | 550 | 4.0E-60 |
| sp|Q5TCZ1|SPD2A_HUMAN | SH3 and PX domain-containing protein 2A OS=Homo sapiens GN=SH3PXD2A PE=1 SV=1 | 344 | 444 | 9.0E-13 |
| sp|O89032|SPD2A_MOUSE | SH3 and PX domain-containing protein 2A OS=Mus musculus GN=Sh3pxd2a PE=1 SV=2 | 344 | 444 | 1.0E-12 |
| sp|A2AAY5|SPD2B_MOUSE | SH3 and PX domain-containing protein 2B OS=Mus musculus GN=Sh3pxd2b PE=1 SV=1 | 344 | 444 | 2.0E-12 |
| sp|A1X283|SPD2B_HUMAN | SH3 and PX domain-containing protein 2B OS=Homo sapiens GN=SH3PXD2B PE=1 SV=3 | 344 | 444 | 2.0E-12 |
| sp|Q1LYG0|SPD2A_DANRE | SH3 and PX domain-containing protein 2A OS=Danio rerio GN=sh3pxd2a PE=3 SV=2 | 344 | 444 | 3.0E-09 |
| sp|O77774|NCF1_BOVIN | Neutrophil cytosol factor 1 OS=Bos taurus GN=NCF1 PE=2 SV=1 | 344 | 472 | 2.0E-08 |
| sp|F1M707|NCF1_RAT | Neutrophil cytosolic factor 1 OS=Rattus norvegicus GN=Ncf1 PE=1 SV=2 | 344 | 447 | 2.0E-08 |
| sp|Q09014|NCF1_MOUSE | Neutrophil cytosol factor 1 OS=Mus musculus GN=Ncf1 PE=1 SV=3 | 344 | 447 | 9.0E-08 |
| sp|P14598|NCF1_HUMAN | Neutrophil cytosol factor 1 OS=Homo sapiens GN=NCF1 PE=1 SV=3 | 344 | 447 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0035091 | phosphatidylinositol binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005543 | phospholipid binding | No |
| GO:0005488 | binding | No |
| GO:0008289 | lipid binding | No |
| Orthofinder run ID | 4 |
| Orthogroup | 4622 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6796 MKALRRSMKGDKHKQSPSIGSKSAFAIVPPKKVIRAIDDYHPDDDLVQSFAKAGVQVLGFSKGDFFHVIGREDDA RWYEACNPALPDARGLVPVDLFQVLGRNERDSAQSDGSKTPIIKSPDHDSGYGDTTAPPLPPVPSQRTSRSMRPA GTVYAKVRYAFTTLTQRPDELSAEEGENLIIVAQSNHEWVIAKPIMRLGGPGLIPISFIDVFDEPPLGTDPNNPP TPVGDPLEALRRAGVPSVEDWKQMAAQYKNSSITLGKFDGVSSPTSHQPGIEQGMSGLSLQSGGRQSHQNGSRNH GYHNYSASGQHSIPGDSSAGGSPPHMPAPVMARIPRYCFGEDKYWFVIEAKLEDGRCWELSRYYQDFYDFQIALL AEFPAEAGNTSTQKRTLPYMPGPVNYVTDAITEGRLYNLDAYIKNLLNQPPHISRCDLVKLFFKPREGDYEIDPG AFGDDEYRMSESSHQSSAESPGNAASVKSSSLTSNGYSYSGLSPASRPGGGHPQGMAAPQEQAPVTAMKIKVRYK EDVFAMRVATDIIFEDLFDKVQERIKAAPGEDIALFYLDEQSSTLQSLASTEDLDLALQRNEKLTIYCEVA* |
| Coding | >OphauB2|6796 ATGAAGGCCCTGCGGCGCTCTATGAAGGGCGACAAGCACAAGCAAAGCCCCTCCATCGGCTCCAAATCCGCCTTT GCTATTGTGCCGCCCAAAAAGGTTATCCGCGCCATCGACGACTATCACCCCGATGACGATCTGGTCCAGAGCTTT GCCAAGGCCGGCGTCCAGGTCCTTGGTTTTTCCAAGGGTGATTTTTTCCACGTCATTGGCCGCGAAGACGATGCC CGATGGTACGAGGCCTGTAATCCAGCGCTGCCAGATGCCCGTGGACTTGTCCCCGTCGATCTCTTCCAGGTGCTT GGACGCAACGAGAGGGACAGCGCACAGTCTGATGGCAGCAAAACGCCCATCATTAAAAGCCCCGACCACGATTCC GGCTATGGCGACACGACGGCACCACCCCTACCCCCCGTTCCCTCTCAGCGTACCTCGAGGTCCATGAGGCCCGCC GGCACAGTTTACGCCAAGGTTCGCTACGCCTTCACCACCCTTACCCAGCGACCAGACGAGCTGTCGGCAGAGGAG GGCGAGAACCTCATTATTGTCGCACAATCAAATCACGAATGGGTCATTGCCAAGCCTATTATGCGATTAGGCGGT CCCGGCCTGATCCCCATTAGCTTTATCGATGTTTTTGACGAGCCGCCGCTGGGCACGGATCCGAATAATCCTCCG ACGCCAGTTGGCGATCCATTGGAGGCACTGCGCAGAGCTGGTGTGCCCTCTGTCGAGGACTGGAAGCAGATGGCA GCCCAGTACAAGAATAGTAGCATTACGCTCGGCAAATTTGACGGAGTCAGCTCTCCAACCAGCCATCAGCCTGGC ATCGAACAGGGCATGTCTGGCTTGAGTTTGCAATCTGGTGGGCGACAAAGCCATCAAAATGGATCTCGGAATCAT GGATACCACAATTACTCTGCATCGGGCCAGCACTCCATTCCCGGAGACTCGAGCGCCGGAGGCTCACCCCCACAC ATGCCAGCACCAGTCATGGCACGGATACCACGGTACTGCTTTGGCGAGGACAAGTATTGGTTTGTCATTGAGGCA AAACTCGAGGACGGCCGATGCTGGGAGCTCTCACGTTACTACCAAGATTTTTACGACTTCCAAATTGCTCTTCTG GCCGAATTCCCTGCCGAAGCTGGCAACACGAGCACGCAGAAGCGAACTTTGCCATATATGCCCGGCCCCGTTAAC TATGTGACCGATGCCATAACCGAGGGTCGCCTCTATAACTTGGATGCCTACATCAAGAACCTCCTCAACCAGCCA CCCCACATCTCTCGCTGCGATCTTGTCAAGCTCTTCTTCAAGCCACGCGAAGGCGACTACGAGATTGACCCTGGT GCCTTTGGCGACGACGAGTACCGAATGTCGGAAAGCTCGCACCAGTCCTCGGCAGAGTCACCTGGAAATGCCGCT TCTGTCAAATCTTCGTCATTGACTTCGAATGGCTATAGCTATTCGGGCTTATCTCCGGCTTCGAGGCCTGGAGGT GGTCATCCTCAAGGCATGGCAGCGCCACAGGAGCAGGCTCCTGTGACAGCAATGAAGATCAAGGTTCGCTACAAG GAGGATGTCTTTGCCATGCGCGTCGCCACGGATATCATTTTTGAAGACTTGTTCGACAAGGTCCAAGAACGAATC AAAGCTGCTCCCGGCGAGGACATTGCTCTGTTCTACCTCGATGAACAGTCGTCAACCCTTCAAAGTCTGGCAAGC ACCGAAGATTTGGATCTTGCTCTGCAGCGAAACGAGAAGCTCACGATATACTGTGAAGTGGCTTAA |
| Transcript | >OphauB2|6796 ATGAAGGCCCTGCGGCGCTCTATGAAGGGCGACAAGCACAAGCAAAGCCCCTCCATCGGCTCCAAATCCGCCTTT GCTATTGTGCCGCCCAAAAAGGTTATCCGCGCCATCGACGACTATCACCCCGATGACGATCTGGTCCAGAGCTTT GCCAAGGCCGGCGTCCAGGTCCTTGGTTTTTCCAAGGGTGATTTTTTCCACGTCATTGGCCGCGAAGACGATGCC CGATGGTACGAGGCCTGTAATCCAGCGCTGCCAGATGCCCGTGGACTTGTCCCCGTCGATCTCTTCCAGGTGCTT GGACGCAACGAGAGGGACAGCGCACAGTCTGATGGCAGCAAAACGCCCATCATTAAAAGCCCCGACCACGATTCC GGCTATGGCGACACGACGGCACCACCCCTACCCCCCGTTCCCTCTCAGCGTACCTCGAGGTCCATGAGGCCCGCC GGCACAGTTTACGCCAAGGTTCGCTACGCCTTCACCACCCTTACCCAGCGACCAGACGAGCTGTCGGCAGAGGAG GGCGAGAACCTCATTATTGTCGCACAATCAAATCACGAATGGGTCATTGCCAAGCCTATTATGCGATTAGGCGGT CCCGGCCTGATCCCCATTAGCTTTATCGATGTTTTTGACGAGCCGCCGCTGGGCACGGATCCGAATAATCCTCCG ACGCCAGTTGGCGATCCATTGGAGGCACTGCGCAGAGCTGGTGTGCCCTCTGTCGAGGACTGGAAGCAGATGGCA GCCCAGTACAAGAATAGTAGCATTACGCTCGGCAAATTTGACGGAGTCAGCTCTCCAACCAGCCATCAGCCTGGC ATCGAACAGGGCATGTCTGGCTTGAGTTTGCAATCTGGTGGGCGACAAAGCCATCAAAATGGATCTCGGAATCAT GGATACCACAATTACTCTGCATCGGGCCAGCACTCCATTCCCGGAGACTCGAGCGCCGGAGGCTCACCCCCACAC ATGCCAGCACCAGTCATGGCACGGATACCACGGTACTGCTTTGGCGAGGACAAGTATTGGTTTGTCATTGAGGCA AAACTCGAGGACGGCCGATGCTGGGAGCTCTCACGTTACTACCAAGATTTTTACGACTTCCAAATTGCTCTTCTG GCCGAATTCCCTGCCGAAGCTGGCAACACGAGCACGCAGAAGCGAACTTTGCCATATATGCCCGGCCCCGTTAAC TATGTGACCGATGCCATAACCGAGGGTCGCCTCTATAACTTGGATGCCTACATCAAGAACCTCCTCAACCAGCCA CCCCACATCTCTCGCTGCGATCTTGTCAAGCTCTTCTTCAAGCCACGCGAAGGCGACTACGAGATTGACCCTGGT GCCTTTGGCGACGACGAGTACCGAATGTCGGAAAGCTCGCACCAGTCCTCGGCAGAGTCACCTGGAAATGCCGCT TCTGTCAAATCTTCGTCATTGACTTCGAATGGCTATAGCTATTCGGGCTTATCTCCGGCTTCGAGGCCTGGAGGT GGTCATCCTCAAGGCATGGCAGCGCCACAGGAGCAGGCTCCTGTGACAGCAATGAAGATCAAGGTTCGCTACAAG GAGGATGTCTTTGCCATGCGCGTCGCCACGGATATCATTTTTGAAGACTTGTTCGACAAGGTCCAAGAACGAATC AAAGCTGCTCCCGGCGAGGACATTGCTCTGTTCTACCTCGATGAACAGTCGTCAACCCTTCAAAGTCTGGCAAGC ACCGAAGATTTGGATCTTGCTCTGCAGCGAAACGAGAAGCTCACGATATACTGTGAAGTGGCTTAA |
| Gene | >OphauB2|6796 ATGAAGGTTGGCCGCCTTTGCCTCTTGTTATGCGTCTGCTCATGCCCCTTCGTCCTTCCTGTCAAGCCATGGCTG TATTTGGGCCTGCGTCATCAGCGTTGCGCTCGCCTTCACGCTTGCCTTGTCCTGCCATCATTGTCCCTTCCAATT CCCTTGATCGGCGCACCCAAGAATTTCTCGCCAACCATCTTCCTTTCCCTTCCCCGCACCTTGATTCACCTCGCA TCGCCAACAAAAAGCTCTCATTTCCTTTCTTTTGTGTGTGCCTGACCCACGGCTGACCGTTATGGAACTCGTCAA GGCCCTGCGGCGCTCTATGAAGGGCGACAAGCACAAGCAAAGCCCCTCCATCGGCTCCAAATCCGCCTTTGCTAT TGTGCCGCCCAAAAAGGTTCGTGGCTCGCCTTGATCCCCTTGCTCCCCGCTGCCCATCCATTTTGCCATCAAGCG CCCCATCTGTGCCGACCGTGCATATTTTGGAAACCCTGTTGGCGCGCGGCACTCGGCTTAGCACCCTGTTCATGT CGTTGGCTCGGCATGTCGTTTTCGGCTTACACATGATAACCCTGGGTGTGACGTGATGCAAGCCCACTGCTAACT TTGATTTCGCTGCAGGTTATCCGCGCCATCGACGACTATCACCCCGATGACGATCTGGTCCAGAGCTTTGCCAAG GCCGGCGTCCAGGTCCTTGGTTTTTCCAAGGGTGATTTTTTCCACGTCATTGGCCGCGAAGACGATGCCCGATGG TACGAGGCCTGTAATCCAGCGCTGCCAGATGCCCGTGGACTTGTCCCCGTCGATCTCTTCCAGGTGCTTGGACGC AACGAGAGGGACAGCGCACAGTCTGATGGCAGCAAAACGCCCATCATTAAAAGCCCCGACCACGATTCCGGCTAT GGCGACACGACGGCACCACCCCTACCCCCCGTTCCCTCTCAGCGTACCTCGAGGTCCATGAGGCCCGCCGGCACA GTTTACGCCAAGGTTCGCTACGCCTTCACCACCCTTACCCAGCGACCAGACGAGCTGTCGGCAGAGGAGGGCGAG AACCTCATTATTGTCGCACAATCAAATCACGAATGGGTCATTGCCAAGCCTATTATGCGATTAGGCGGTCCCGGC CTGATCCCCATTAGCTTTATCGATGTTTTTGACGAGCCGCCGCTGGGCACGGATCCGAATAATCCTCCGACGCCA GTTGGCGATCCATTGGAGGCACTGCGCAGAGCTGGTGTGCCCTCTGTCGAGGACTGGAAGCAGATGGCAGCCCAG TACAAGAATAGTAGCATTACGCTCGGCAAATTTGACGGAGTCAGCTCTCCAACCAGCCATCAGCCTGGCATCGAA CAGGGCATGTCTGGCTTGAGTTTGCAATCTGGTGGGCGACAAAGCCATCAAAATGGATCTCGGGTAGGCAGGCTT TCCATGCTTGGCAGACTTGTCGCAATAGACTGACCTCAACCTGGTAACAGAATCATGGATACCACAATTACTCTG CATCGGGCCAGCACTCCATTCCCGGAGACTCGAGCGCCGGAGGCTCACCCCCACACATGCCAGCACCAGTCATGG CACGGATACCACGGTACTGCTTTGGCGAGGACAAGTATTGGTTTGTCATTGAGGCAAAACTCGAGGACGGCCGAT GCTGGGAGCTCTCACGTTACTACCAAGATTTTTACGACTTCCAAATTGCTCTTCTGGCCGAATTCCCTGCCGAAG CTGGCAACACGAGCACGCAGAAGCGAACTTTGCCATATATGCCCGGCCCCGTTAACTATGTGACCGATGCCATAA CCGAGGGTCGCCTCTATAACTTGGATGCCTACATCAAGAACCTCCTCAACCAGCCACCCCACATCTCTCGCTGCG ATCTTGTCAAGCTCTTCTTCAAGCCACGCGAAGGCGACTACGAGATTGACCCTGGTGCCTTTGGCGACGACGAGT ACCGAATGTCGGAAAGCTCGCACCAGTCCTCGGCAGAGTCACCTGGAAATGCCGCTTCTGTCAAATCTTCGTCAT TGACTTCGAATGGCTATAGCTATTCGGGCTTATCTCCGGCTTCGAGGCCTGGAGGTGGTCATCCTCAAGGTTAGT CTCATATCCCCGATTCAAACCGGCATAATGACTGATTAAGCTATAGGCATGGCAGCGCCACAGGAGCAGGCTCCT GTGACAGCAATGAAGATCAAGGTTCGCTACAAGGAGGATGTCTTTGCCATGCGCGTCGCCACGGATATCATTTTT GAAGACTTGTTCGACAAGGTCCAAGAACGAATCAAAGCTGCTCCCGGCGAGGACATTGCTCTGTTCTACCTCGAT GAACAGTCGTCAACCCTTCAAAGTCTGGCAAGCACCGAAGATTTGGATCTTGCTCTGCAGCGAAACGAGAAGCTC ACGATATACTGTGAAGTGGCTTAA |