Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6734
Gene name
LocationContig_64:56468..57500
Strand+
Gene length (bp)1032
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5R7D0|COX18_PONAB Mitochondrial inner membrane protein COX18 OS=Pongo abelii GN=COX18 PE=2 SV=1 57 309 4.0E-13
sp|Q8VC74|COX18_MOUSE Mitochondrial inner membrane protein COX18 OS=Mus musculus GN=Cox18 PE=1 SV=5 58 309 4.0E-13
sp|Q8N8Q8|COX18_HUMAN Mitochondrial inner membrane protein COX18 OS=Homo sapiens GN=COX18 PE=2 SV=1 57 309 9.0E-11

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 35 57 22
2 62 84 22
3 142 161 19
4 208 230 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4482
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1604
Ophiocordyceps australis map64 (Brazil) OphauB2|6734 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|06738
Ophiocordyceps camponoti-rufipedis Ophun1|2590
Ophiocordyceps kimflemingae Ophio5|912
Ophiocordyceps subramaniannii Hirsu2|9338

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6734
MATMISLTRRLAARNAVFTTRPLPPCRKPLARRQFHLGVSILGKSVVWTAKHISAFYHVTGIPWFIMIPLAAVAV
GAVVRLPCSILYYRLRRRREELKPLIDLSCIYNRIKATRKHKNDRIAWDKEVAKLDKESRRDIYKSFGVGHWNFY
LHLTVVPFVIVSEALRKLCGSPGSWLAVQLGLEKGSQGARAAVTRPLFEASLTDGGCLWFPDLTVMDPYFILPLI
CSIVFARQIWARMPRERLLILLGIGNKPEMTSSTTRMVLGRVLGRAIIMTPAIPLALADLPSAVMLFWISSSLVG
DAISSMLRAKYQKRGIELTYKSKVKALKSYIPRDPEPTLIKQK*
Coding >OphauB2|6734
ATGGCCACCATGATATCGCTCACCCGCCGCCTAGCAGCTAGAAACGCAGTGTTTACGACGCGGCCACTGCCGCCG
TGCCGAAAGCCTCTTGCACGACGACAGTTCCATCTAGGAGTGTCCATCTTGGGCAAAAGCGTGGTATGGACCGCC
AAGCACATTTCCGCGTTTTACCATGTGACTGGCATTCCATGGTTCATCATGATCCCGCTCGCCGCCGTTGCTGTT
GGCGCCGTGGTTCGGTTGCCGTGCAGCATACTTTATTACAGACTGAGGAGGCGCCGTGAGGAGCTGAAGCCTCTA
ATCGATTTGTCGTGTATATACAATCGCATCAAGGCTACTCGTAAACACAAAAACGACCGAATAGCATGGGACAAG
GAGGTTGCGAAATTGGACAAGGAGTCACGGCGGGACATTTACAAATCCTTTGGCGTTGGGCACTGGAATTTCTAT
CTTCACCTTACCGTGGTGCCCTTTGTCATAGTTTCTGAGGCGTTGCGCAAACTCTGCGGCTCGCCTGGTTCCTGG
CTGGCGGTGCAACTGGGCCTAGAAAAGGGGTCGCAGGGCGCCAGGGCGGCCGTGACCCGGCCCCTCTTTGAGGCA
TCGCTGACAGACGGTGGATGCCTCTGGTTTCCCGACCTGACGGTTATGGATCCTTATTTCATCCTGCCCCTCATT
TGCTCGATTGTGTTTGCTCGACAAATATGGGCTCGAATGCCGCGAGAGAGGCTACTCATCTTGTTGGGCATAGGC
AACAAGCCTGAAATGACCAGCAGTACAACGCGAATGGTTCTAGGAAGAGTTCTAGGAAGAGCAATTATTATGACA
CCCGCGATCCCCCTCGCCCTTGCAGACCTGCCTAGCGCAGTCATGCTCTTCTGGATTTCTTCTTCCCTCGTCGGT
GACGCCATCTCCTCGATGCTGCGCGCCAAGTACCAAAAGCGAGGAATCGAGTTGACCTATAAGTCAAAAGTTAAA
GCACTCAAGTCATATATCCCACGCGATCCCGAGCCAACCTTGATAAAGCAGAAATGA
Transcript >OphauB2|6734
ATGGCCACCATGATATCGCTCACCCGCCGCCTAGCAGCTAGAAACGCAGTGTTTACGACGCGGCCACTGCCGCCG
TGCCGAAAGCCTCTTGCACGACGACAGTTCCATCTAGGAGTGTCCATCTTGGGCAAAAGCGTGGTATGGACCGCC
AAGCACATTTCCGCGTTTTACCATGTGACTGGCATTCCATGGTTCATCATGATCCCGCTCGCCGCCGTTGCTGTT
GGCGCCGTGGTTCGGTTGCCGTGCAGCATACTTTATTACAGACTGAGGAGGCGCCGTGAGGAGCTGAAGCCTCTA
ATCGATTTGTCGTGTATATACAATCGCATCAAGGCTACTCGTAAACACAAAAACGACCGAATAGCATGGGACAAG
GAGGTTGCGAAATTGGACAAGGAGTCACGGCGGGACATTTACAAATCCTTTGGCGTTGGGCACTGGAATTTCTAT
CTTCACCTTACCGTGGTGCCCTTTGTCATAGTTTCTGAGGCGTTGCGCAAACTCTGCGGCTCGCCTGGTTCCTGG
CTGGCGGTGCAACTGGGCCTAGAAAAGGGGTCGCAGGGCGCCAGGGCGGCCGTGACCCGGCCCCTCTTTGAGGCA
TCGCTGACAGACGGTGGATGCCTCTGGTTTCCCGACCTGACGGTTATGGATCCTTATTTCATCCTGCCCCTCATT
TGCTCGATTGTGTTTGCTCGACAAATATGGGCTCGAATGCCGCGAGAGAGGCTACTCATCTTGTTGGGCATAGGC
AACAAGCCTGAAATGACCAGCAGTACAACGCGAATGGTTCTAGGAAGAGTTCTAGGAAGAGCAATTATTATGACA
CCCGCGATCCCCCTCGCCCTTGCAGACCTGCCTAGCGCAGTCATGCTCTTCTGGATTTCTTCTTCCCTCGTCGGT
GACGCCATCTCCTCGATGCTGCGCGCCAAGTACCAAAAGCGAGGAATCGAGTTGACCTATAAGTCAAAAGTTAAA
GCACTCAAGTCATATATCCCACGCGATCCCGAGCCAACCTTGATAAAGCAGAAATGA
Gene >OphauB2|6734
ATGGCCACCATGATATCGCTCACCCGCCGCCTAGCAGCTAGAAACGCAGTGTTTACGACGCGGCCACTGCCGCCG
TGCCGAAAGCCTCTTGCACGACGACAGTTCCATCTAGGAGTGTCCATCTTGGGCAAAAGCGTGGTATGGACCGCC
AAGCACATTTCCGCGTTTTACCATGTGACTGGCATTCCATGGTTCATCATGATCCCGCTCGCCGCCGTTGCTGTT
GGCGCCGTGGTTCGGTTGCCGTGCAGCATACTTTATTACAGACTGAGGAGGCGCCGTGAGGAGCTGAAGCCTCTA
ATCGATTTGTCGTGTATATACAATCGCATCAAGGCTACTCGTAAACACAAAAACGACCGAATAGCATGGGACAAG
GAGGTTGCGAAATTGGACAAGGAGTCACGGCGGGACATTTACAAATCCTTTGGCGTTGGGCACTGGAATTTCTAT
CTTCACCTTACCGTGGTGCCCTTTGTCATAGTTTCTGAGGCGTTGCGCAAACTCTGCGGCTCGCCTGGTTCCTGG
CTGGCGGTGCAACTGGGCCTAGAAAAGGGGTCGCAGGGCGCCAGGGCGGCCGTGACCCGGCCCCTCTTTGAGGCA
TCGCTGACAGACGGTGGATGCCTCTGGTTTCCCGACCTGACGGTTATGGATCCTTATTTCATCCTGCCCCTCATT
TGCTCGATTGTGTTTGCTCGACAAATATGGGCTCGAATGCCGCGAGAGAGGCTACTCATCTTGTTGGGCATAGGC
AACAAGCCTGAAATGACCAGCAGTACAACGCGAATGGTTCTAGGAAGAGTTCTAGGAAGAGCAATTATTATGACA
CCCGCGATCCCCCTCGCCCTTGCAGACCTGCCTAGCGCAGTCATGCTCTTCTGGATTTCTTCTTCCCTCGTCGGT
GACGCCATCTCCTCGATGCTGCGCGCCAAGTACCAAAAGCGAGGAATCGAGTTGACCTATAAGTCAAAAGTTAAA
GCACTCAAGTCATATATCCCACGCGATCCCGAGCCAACCTTGATAAAGCAGAAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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