Protein ID | OphauB2|6734 |
Gene name | |
Location | Contig_64:56468..57500 |
Strand | + |
Gene length (bp) | 1032 |
Transcript length (bp) | 1032 |
Coding sequence length (bp) | 1032 |
Protein length (aa) | 344 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5R7D0|COX18_PONAB | Mitochondrial inner membrane protein COX18 OS=Pongo abelii GN=COX18 PE=2 SV=1 | 57 | 309 | 4.0E-13 |
sp|Q8VC74|COX18_MOUSE | Mitochondrial inner membrane protein COX18 OS=Mus musculus GN=Cox18 PE=1 SV=5 | 58 | 309 | 4.0E-13 |
sp|Q8N8Q8|COX18_HUMAN | Mitochondrial inner membrane protein COX18 OS=Homo sapiens GN=COX18 PE=2 SV=1 | 57 | 309 | 9.0E-11 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 35 | 57 | 22 |
2 | 62 | 84 | 22 |
3 | 142 | 161 | 19 |
4 | 208 | 230 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 4482 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|6734 MATMISLTRRLAARNAVFTTRPLPPCRKPLARRQFHLGVSILGKSVVWTAKHISAFYHVTGIPWFIMIPLAAVAV GAVVRLPCSILYYRLRRRREELKPLIDLSCIYNRIKATRKHKNDRIAWDKEVAKLDKESRRDIYKSFGVGHWNFY LHLTVVPFVIVSEALRKLCGSPGSWLAVQLGLEKGSQGARAAVTRPLFEASLTDGGCLWFPDLTVMDPYFILPLI CSIVFARQIWARMPRERLLILLGIGNKPEMTSSTTRMVLGRVLGRAIIMTPAIPLALADLPSAVMLFWISSSLVG DAISSMLRAKYQKRGIELTYKSKVKALKSYIPRDPEPTLIKQK* |
Coding | >OphauB2|6734 ATGGCCACCATGATATCGCTCACCCGCCGCCTAGCAGCTAGAAACGCAGTGTTTACGACGCGGCCACTGCCGCCG TGCCGAAAGCCTCTTGCACGACGACAGTTCCATCTAGGAGTGTCCATCTTGGGCAAAAGCGTGGTATGGACCGCC AAGCACATTTCCGCGTTTTACCATGTGACTGGCATTCCATGGTTCATCATGATCCCGCTCGCCGCCGTTGCTGTT GGCGCCGTGGTTCGGTTGCCGTGCAGCATACTTTATTACAGACTGAGGAGGCGCCGTGAGGAGCTGAAGCCTCTA ATCGATTTGTCGTGTATATACAATCGCATCAAGGCTACTCGTAAACACAAAAACGACCGAATAGCATGGGACAAG GAGGTTGCGAAATTGGACAAGGAGTCACGGCGGGACATTTACAAATCCTTTGGCGTTGGGCACTGGAATTTCTAT CTTCACCTTACCGTGGTGCCCTTTGTCATAGTTTCTGAGGCGTTGCGCAAACTCTGCGGCTCGCCTGGTTCCTGG CTGGCGGTGCAACTGGGCCTAGAAAAGGGGTCGCAGGGCGCCAGGGCGGCCGTGACCCGGCCCCTCTTTGAGGCA TCGCTGACAGACGGTGGATGCCTCTGGTTTCCCGACCTGACGGTTATGGATCCTTATTTCATCCTGCCCCTCATT TGCTCGATTGTGTTTGCTCGACAAATATGGGCTCGAATGCCGCGAGAGAGGCTACTCATCTTGTTGGGCATAGGC AACAAGCCTGAAATGACCAGCAGTACAACGCGAATGGTTCTAGGAAGAGTTCTAGGAAGAGCAATTATTATGACA CCCGCGATCCCCCTCGCCCTTGCAGACCTGCCTAGCGCAGTCATGCTCTTCTGGATTTCTTCTTCCCTCGTCGGT GACGCCATCTCCTCGATGCTGCGCGCCAAGTACCAAAAGCGAGGAATCGAGTTGACCTATAAGTCAAAAGTTAAA GCACTCAAGTCATATATCCCACGCGATCCCGAGCCAACCTTGATAAAGCAGAAATGA |
Transcript | >OphauB2|6734 ATGGCCACCATGATATCGCTCACCCGCCGCCTAGCAGCTAGAAACGCAGTGTTTACGACGCGGCCACTGCCGCCG TGCCGAAAGCCTCTTGCACGACGACAGTTCCATCTAGGAGTGTCCATCTTGGGCAAAAGCGTGGTATGGACCGCC AAGCACATTTCCGCGTTTTACCATGTGACTGGCATTCCATGGTTCATCATGATCCCGCTCGCCGCCGTTGCTGTT GGCGCCGTGGTTCGGTTGCCGTGCAGCATACTTTATTACAGACTGAGGAGGCGCCGTGAGGAGCTGAAGCCTCTA ATCGATTTGTCGTGTATATACAATCGCATCAAGGCTACTCGTAAACACAAAAACGACCGAATAGCATGGGACAAG GAGGTTGCGAAATTGGACAAGGAGTCACGGCGGGACATTTACAAATCCTTTGGCGTTGGGCACTGGAATTTCTAT CTTCACCTTACCGTGGTGCCCTTTGTCATAGTTTCTGAGGCGTTGCGCAAACTCTGCGGCTCGCCTGGTTCCTGG CTGGCGGTGCAACTGGGCCTAGAAAAGGGGTCGCAGGGCGCCAGGGCGGCCGTGACCCGGCCCCTCTTTGAGGCA TCGCTGACAGACGGTGGATGCCTCTGGTTTCCCGACCTGACGGTTATGGATCCTTATTTCATCCTGCCCCTCATT TGCTCGATTGTGTTTGCTCGACAAATATGGGCTCGAATGCCGCGAGAGAGGCTACTCATCTTGTTGGGCATAGGC AACAAGCCTGAAATGACCAGCAGTACAACGCGAATGGTTCTAGGAAGAGTTCTAGGAAGAGCAATTATTATGACA CCCGCGATCCCCCTCGCCCTTGCAGACCTGCCTAGCGCAGTCATGCTCTTCTGGATTTCTTCTTCCCTCGTCGGT GACGCCATCTCCTCGATGCTGCGCGCCAAGTACCAAAAGCGAGGAATCGAGTTGACCTATAAGTCAAAAGTTAAA GCACTCAAGTCATATATCCCACGCGATCCCGAGCCAACCTTGATAAAGCAGAAATGA |
Gene | >OphauB2|6734 ATGGCCACCATGATATCGCTCACCCGCCGCCTAGCAGCTAGAAACGCAGTGTTTACGACGCGGCCACTGCCGCCG TGCCGAAAGCCTCTTGCACGACGACAGTTCCATCTAGGAGTGTCCATCTTGGGCAAAAGCGTGGTATGGACCGCC AAGCACATTTCCGCGTTTTACCATGTGACTGGCATTCCATGGTTCATCATGATCCCGCTCGCCGCCGTTGCTGTT GGCGCCGTGGTTCGGTTGCCGTGCAGCATACTTTATTACAGACTGAGGAGGCGCCGTGAGGAGCTGAAGCCTCTA ATCGATTTGTCGTGTATATACAATCGCATCAAGGCTACTCGTAAACACAAAAACGACCGAATAGCATGGGACAAG GAGGTTGCGAAATTGGACAAGGAGTCACGGCGGGACATTTACAAATCCTTTGGCGTTGGGCACTGGAATTTCTAT CTTCACCTTACCGTGGTGCCCTTTGTCATAGTTTCTGAGGCGTTGCGCAAACTCTGCGGCTCGCCTGGTTCCTGG CTGGCGGTGCAACTGGGCCTAGAAAAGGGGTCGCAGGGCGCCAGGGCGGCCGTGACCCGGCCCCTCTTTGAGGCA TCGCTGACAGACGGTGGATGCCTCTGGTTTCCCGACCTGACGGTTATGGATCCTTATTTCATCCTGCCCCTCATT TGCTCGATTGTGTTTGCTCGACAAATATGGGCTCGAATGCCGCGAGAGAGGCTACTCATCTTGTTGGGCATAGGC AACAAGCCTGAAATGACCAGCAGTACAACGCGAATGGTTCTAGGAAGAGTTCTAGGAAGAGCAATTATTATGACA CCCGCGATCCCCCTCGCCCTTGCAGACCTGCCTAGCGCAGTCATGCTCTTCTGGATTTCTTCTTCCCTCGTCGGT GACGCCATCTCCTCGATGCTGCGCGCCAAGTACCAAAAGCGAGGAATCGAGTTGACCTATAAGTCAAAAGTTAAA GCACTCAAGTCATATATCCCACGCGATCCCGAGCCAACCTTGATAAAGCAGAAATGA |