© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6703 |
| Gene name | |
| Location | Contig_63:84954..86929 |
| Strand | - |
| Gene length (bp) | 1975 |
| Transcript length (bp) | 1725 |
| Coding sequence length (bp) | 1725 |
| Protein length (aa) | 575 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 2.7E-39 | 18 | 466 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14123|NAH2_SCHPO | Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 | 3 | 463 | 5.0E-82 |
| sp|Q99173|NAH1_ZYGRO | Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 | 3 | 468 | 3.0E-81 |
| sp|Q99271|NAH1_YEAST | Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 | 4 | 468 | 2.0E-80 |
| sp|O42701|NAH2_ZYGRO | Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 | 3 | 468 | 3.0E-80 |
| sp|P36606|NAH_SCHPO | Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 | 3 | 466 | 7.0E-58 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0006811 | ion transport | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015297 | antiporter activity | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 27 | 17 |
| 2 | 34 | 56 | 22 |
| 3 | 71 | 93 | 22 |
| 4 | 106 | 128 | 22 |
| 5 | 241 | 263 | 22 |
| 6 | 283 | 302 | 19 |
| 7 | 368 | 390 | 22 |
| 8 | 403 | 420 | 17 |
| 9 | 447 | 469 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6703 MPNLDVSELNIVLSVLGTFIVLYGIISVKIKQKWYLGEALPAVAIGVALGPIAAKFLDSERWGSAEKGQTPEITL GVTRVMIGLQLVIAGYQLPAKYNLKRWKEMLMCLLPIMTIMWLCTTLCMLATVPKVTLLAALVIGSCVTCTDPIL SQAIAKGPFADKFVARPLREIISSEAGANDGFGFPFLLLAVYLIRHADIPGAGENKEGAVAVAGQAARLLFAREE QVGRLGGGVGVALKNWFLETWLYIVFLSIIYGAVVGYGSCKAVKFALRKKWIDSESYVLFPAALGMFIVGTCGAI GTDDLLACFVAGNALNWDGEFLEETERRHDEVNSCIDVLLNFGGFMYIGTIMPWSQFNDPDGTGLTYGRLILLGL MVILFRRIPSILLSYKLMPAVVNGWKEALFMGYFGPIGAGAVFYVEHTRHLFPELGEGDEEETNLVRVMVPVVYW LVLFSIIVHGLSIPALNLIYGWMGVKPIQEDAVEIRRVSMRVATPVNAVPGDRDTFIAYNRFSRPVFDPDTLPTA RDEPNIGYAVGEYPRDIKPSPRVNYKLYPDDDIEQEKQRAQRRVIRYGQ* |
| Coding | >OphauB2|6703 ATGCCGAATCTCGACGTCTCTGAGCTCAACATTGTCCTCTCCGTCTTGGGCACTTTTATCGTCCTCTATGGTATC ATTTCGGTCAAGATCAAGCAGAAATGGTATCTGGGAGAAGCTCTTCCTGCCGTTGCCATAGGAGTTGCACTGGGC CCCATAGCTGCCAAGTTTCTCGACAGTGAGAGATGGGGCTCGGCTGAAAAGGGGCAGACGCCCGAAATCACTTTG GGAGTCACCAGAGTCATGATTGGTCTGCAGCTCGTCATTGCTGGTTACCAACTGCCTGCGAAATACAACCTCAAG CGATGGAAGGAAATGCTCATGTGTCTGCTGCCCATCATGACCATCATGTGGCTTTGCACGACACTCTGCATGCTG GCAACGGTGCCCAAAGTGACGCTCCTGGCAGCTCTCGTCATTGGGTCCTGCGTTACGTGTACCGATCCCATTCTG TCTCAAGCCATTGCAAAGGGCCCCTTTGCCGACAAGTTTGTGGCCCGTCCGCTGCGTGAAATCATATCATCCGAG GCCGGTGCCAATGATGGCTTCGGCTTCCCGTTTCTGCTGCTTGCCGTCTATCTTATCCGCCATGCGGACATTCCT GGTGCGGGCGAGAACAAGGAGGGCGCCGTGGCGGTGGCTGGCCAAGCGGCCCGTCTTCTCTTTGCGCGCGAGGAG CAAGTTGGTCGGTTGGGCGGCGGCGTTGGAGTCGCCTTGAAGAACTGGTTCCTTGAGACGTGGCTCTACATTGTC TTCTTGTCCATCATCTACGGCGCTGTAGTCGGCTATGGGTCCTGCAAGGCCGTCAAGTTTGCCCTGCGCAAGAAA TGGATCGACAGCGAGTCCTATGTGCTCTTCCCCGCTGCACTCGGCATGTTCATCGTCGGCACCTGTGGCGCCATT GGTACCGATGACCTCTTGGCCTGCTTCGTTGCTGGCAATGCTCTCAACTGGGACGGTGAGTTCCTCGAGGAGACG GAGCGACGCCACGACGAAGTCAACTCGTGTATCGACGTGCTGCTCAATTTTGGTGGCTTCATGTACATTGGCACC ATAATGCCCTGGTCCCAGTTCAACGATCCCGACGGCACCGGCTTGACCTACGGCCGCCTGATACTCCTGGGCCTC ATGGTTATCCTCTTCCGCCGCATCCCTTCCATCCTTCTCTCCTACAAACTCATGCCTGCTGTTGTCAATGGCTGG AAAGAAGCTCTTTTCATGGGGTATTTTGGGCCCATTGGCGCCGGTGCCGTCTTTTATGTTGAGCATACACGCCAT CTGTTCCCTGAGCTTGGAGAAGGCGACGAAGAAGAGACCAACCTGGTGCGCGTCATGGTGCCCGTTGTTTACTGG CTGGTGCTGTTTTCAATCATTGTTCACGGGCTCTCCATCCCCGCCCTCAACCTCATCTACGGTTGGATGGGCGTC AAGCCAATCCAGGAGGATGCTGTTGAGATCCGTCGCGTCTCCATGCGAGTAGCAACACCCGTCAATGCCGTGCCC GGAGACAGGGATACCTTTATCGCCTACAATCGCTTCAGTAGGCCCGTCTTCGATCCGGACACGCTTCCAACTGCT CGAGACGAGCCCAACATTGGCTACGCCGTTGGTGAGTACCCAAGAGATATTAAGCCATCGCCTCGCGTCAATTAC AAGCTCTATCCGGACGACGACATTGAGCAAGAGAAGCAGAGGGCCCAGCGAAGGGTCATCAGATACGGCCAGTAA |
| Transcript | >OphauB2|6703 ATGCCGAATCTCGACGTCTCTGAGCTCAACATTGTCCTCTCCGTCTTGGGCACTTTTATCGTCCTCTATGGTATC ATTTCGGTCAAGATCAAGCAGAAATGGTATCTGGGAGAAGCTCTTCCTGCCGTTGCCATAGGAGTTGCACTGGGC CCCATAGCTGCCAAGTTTCTCGACAGTGAGAGATGGGGCTCGGCTGAAAAGGGGCAGACGCCCGAAATCACTTTG GGAGTCACCAGAGTCATGATTGGTCTGCAGCTCGTCATTGCTGGTTACCAACTGCCTGCGAAATACAACCTCAAG CGATGGAAGGAAATGCTCATGTGTCTGCTGCCCATCATGACCATCATGTGGCTTTGCACGACACTCTGCATGCTG GCAACGGTGCCCAAAGTGACGCTCCTGGCAGCTCTCGTCATTGGGTCCTGCGTTACGTGTACCGATCCCATTCTG TCTCAAGCCATTGCAAAGGGCCCCTTTGCCGACAAGTTTGTGGCCCGTCCGCTGCGTGAAATCATATCATCCGAG GCCGGTGCCAATGATGGCTTCGGCTTCCCGTTTCTGCTGCTTGCCGTCTATCTTATCCGCCATGCGGACATTCCT GGTGCGGGCGAGAACAAGGAGGGCGCCGTGGCGGTGGCTGGCCAAGCGGCCCGTCTTCTCTTTGCGCGCGAGGAG CAAGTTGGTCGGTTGGGCGGCGGCGTTGGAGTCGCCTTGAAGAACTGGTTCCTTGAGACGTGGCTCTACATTGTC TTCTTGTCCATCATCTACGGCGCTGTAGTCGGCTATGGGTCCTGCAAGGCCGTCAAGTTTGCCCTGCGCAAGAAA TGGATCGACAGCGAGTCCTATGTGCTCTTCCCCGCTGCACTCGGCATGTTCATCGTCGGCACCTGTGGCGCCATT GGTACCGATGACCTCTTGGCCTGCTTCGTTGCTGGCAATGCTCTCAACTGGGACGGTGAGTTCCTCGAGGAGACG GAGCGACGCCACGACGAAGTCAACTCGTGTATCGACGTGCTGCTCAATTTTGGTGGCTTCATGTACATTGGCACC ATAATGCCCTGGTCCCAGTTCAACGATCCCGACGGCACCGGCTTGACCTACGGCCGCCTGATACTCCTGGGCCTC ATGGTTATCCTCTTCCGCCGCATCCCTTCCATCCTTCTCTCCTACAAACTCATGCCTGCTGTTGTCAATGGCTGG AAAGAAGCTCTTTTCATGGGGTATTTTGGGCCCATTGGCGCCGGTGCCGTCTTTTATGTTGAGCATACACGCCAT CTGTTCCCTGAGCTTGGAGAAGGCGACGAAGAAGAGACCAACCTGGTGCGCGTCATGGTGCCCGTTGTTTACTGG CTGGTGCTGTTTTCAATCATTGTTCACGGGCTCTCCATCCCCGCCCTCAACCTCATCTACGGTTGGATGGGCGTC AAGCCAATCCAGGAGGATGCTGTTGAGATCCGTCGCGTCTCCATGCGAGTAGCAACACCCGTCAATGCCGTGCCC GGAGACAGGGATACCTTTATCGCCTACAATCGCTTCAGTAGGCCCGTCTTCGATCCGGACACGCTTCCAACTGCT CGAGACGAGCCCAACATTGGCTACGCCGTTGGTGAGTACCCAAGAGATATTAAGCCATCGCCTCGCGTCAATTAC AAGCTCTATCCGGACGACGACATTGAGCAAGAGAAGCAGAGGGCCCAGCGAAGGGTCATCAGATACGGCCAGTAA |
| Gene | >OphauB2|6703 ATGCCGAATCTCGACGTCTCTGAGCTCAACATTGTCCTCTCCGTCTTGGGTAAGAAGAGTTAATGTTTTGAAAAC GGAGGGCAAGAAGAGGGTGCAAATATTCGTGTTAACCATTAGGCTCTAGGCACTTTTATCGTCCTCTATGGTATC ATTTCGGTCAAGATCAAGCAGAAATGGTATCTGGGAGAAGCTCGTGAGCGCAAACCTCTAGCAACACAGTTGCCA CAAAGTGCATGCTAACAAGCACAGTTCCTGCCGTTGCCATAGGAGTTGCACTGGGCCCCATAGCTGCCAAGTTTC TCGACAGTGAGAGATGGGGCTCGGCTGAAAAGGGGCAGACGCCCGAAATCACTTTGGTGAGGCCTAGCCCACGCC GTCGCTTGGACCTTTGATGGGCCACCAGGCTAACAAGGAACCATGAACAGGGAGTCACCAGAGTCATGATTGGTC TGCAGCTCGTCATTGCTGGTTACCAACTGCCTGCGAAATACAACCTCAAGCGATGGAAGGAAATGCTCATGTGTC TGCTGCCCATCATGACCATCATGTGGCTTTGCACGACACTCTGCATGCTGGCAACGGTGCCCAAAGTGACGCTCC TGGCAGCTCTCGTCATTGGGTCCTGCGTTACGTGTACCGATCCCATTCTGTCTCAAGCCATTGCAAAGGGCCCCT TTGCCGACAAGTTTGTGGCCCGTCCGCTGCGTGAAATCATATCATCCGAGGCCGGTGCCAATGATGGCTTCGGCT TCCCGTTTCTGCTGCTTGCCGTCTATCTTATCCGCCATGCGGACATTCCTGGTGCGGGCGAGAACAAGGAGGGCG CCGTGGCGGTGGCTGGCCAAGCGGCCCGTCTTCTCTTTGCGCGCGAGGAGCAAGTTGGTCGGTTGGGCGGCGGCG TTGGAGTCGCCTTGAAGAACTGGTTCCTTGAGACGTGGCTCTACATTGTCTTCTTGTCCATCATCTACGGCGCTG TAGTCGGCTATGGGTCCTGCAAGGCCGTCAAGTTTGCCCTGCGCAAGTGAGTGGCTCACTGATCCCTCAAGCCCA GCTTCTGACCCCATGCAACAGGAAATGGATCGACAGCGAGTCCTATGTGCTCTTCCCCGCTGCACTCGGCATGTT CATCGTCGGCACCTGTGGCGCCATTGGTACCGATGACCTCTTGGCCTGCTTCGTTGCTGGCAATGCTCTCAACTG GGACGGTGAGTTCCTCGAGGAGACGGAGCGACGCCACGACGAAGTCAACTCGTGTATCGACGTGCTGCTCAATTT TGGTGGCTTCATGTACATTGGCACCATAATGCCCTGGTCCCAGTTCAACGATCCCGACGGCACCGGCTTGACCTA CGGCCGCCTGATACTCCTGGGCCTCATGGTTATCCTCTTCCGCCGCATCCCTTCCATCCTTCTCTCCTACAAACT CATGCCTGCTGTTGTCAATGGCTGGAAAGAAGCTCTTTTCATGGGGTATTTTGGGCCCATTGGCGCCGGTGCCGT CTTTTATGTTGAGCATACACGCCATCTGTTCCCTGAGCTTGGAGAAGGCGACGAAGAAGAGACCAACCTGGTGCG CGTCATGGTGCCCGTTGTTTACTGGCTGGTGCTGTTTTCAATCATTGTTCACGGGCTCTCCATCCCCGCCCTCAA CCTCATCTACGGTTGGATGGGCGTCAAGCCAATCCAGGAGGATGCTGTTGAGATCCGTCGCGTCTCCATGCGAGT AGCAACACCCGTCAATGCCGTGCCCGGAGACAGGGATACCTTTATCGCCTACAATCGCTTCAGTAGGCCCGTCTT CGATCCGGACACGCTTCCAACTGCTCGAGACGAGCCCAACATTGGCTACGCCGTTGGTGAGTACCCAAGAGATAT TAAGCCATCGCCTCGCGTCAATTACAAGCTCTATCCGGACGACGACATTGAGCAAGAGAAGCAGAGGGCCCAGCG AAGGGTCATCAGATACGGCCAGTAA |