Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6680
Gene name
LocationContig_63:32270..33319
Strand+
Gene length (bp)1049
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11338 DUF3140 Protein of unknown function (DUF3140) 1.8E-34 10 113
PF11160 Hva1_TUDOR Hypervirulence associated proteins TUDOR domain 6.6E-12 245 304

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6680
MKDQETVIEEFNDIVNMSASELEDWLKSDDSQSAGWAKEDGDGESVGHDSGRNIISILKSNPDKDPDKYTEEQVE
HMRKVVSYCKRHLAQEEKANSKKSAAEVKKTKSYASLKNWGHDLLKKSKTSNGDEKQDKNGEKHTGEKRKAVPDG
EGSANKKRETEKGKSRDDDGSGKDKEETNSKDAKANGHNEGKDEEKKTRENKQQEDEEDEEEVSEEDADEEPQPK
SAKDTGEPGSNGASKGPDTGDTVSWNWGNGQPEGKVLDVKEDTATVKTKRGNQVSRHGDSANPAVVLDTGKSKAI
KLSNELNET*
Coding >OphauB2|6680
ATGAAGGACCAAGAGACTGTGATTGAAGAGTTCAACGACATTGTCAACATGTCGGCTTCAGAGCTGGAAGACTGG
CTCAAGTCAGATGACTCGCAAAGCGCTGGTTGGGCCAAGGAAGACGGAGATGGAGAGTCAGTCGGGCATGACAGT
GGTCGAAATATCATCAGCATTCTCAAATCGAACCCCGATAAAGACCCCGACAAGTATACAGAAGAACAGGTGGAG
CATATGCGCAAAGTAGTGTCTTACTGCAAGCGACACCTGGCCCAAGAGGAAAAAGCAAACAGCAAAAAGTCGGCT
GCAGAGGTCAAGAAGACCAAGTCCTACGCCTCGTTAAAAAATTGGGGGCACGACTTGTTGAAAAAGTCAAAAACC
TCAAACGGTGACGAGAAACAGGACAAGAATGGAGAGAAGCACACAGGAGAAAAGAGAAAGGCAGTTCCTGACGGA
GAGGGCAGTGCCAATAAGAAGAGGGAGACGGAAAAGGGCAAGTCGCGCGATGATGACGGAAGCGGCAAAGACAAG
GAAGAAACCAATAGCAAGGATGCCAAGGCCAATGGGCACAACGAAGGCAAAGACGAGGAGAAGAAGACTCGGGAA
AACAAGCAGCAAGAGGATGAAGAGGATGAAGAGGAAGTGAGCGAGGAGGACGCAGACGAGGAGCCACAACCAAAG
AGTGCAAAAGACACGGGCGAACCGGGTTCCAACGGGGCAAGCAAAGGTCCCGATACTGGCGACACGGTCAGCTGG
AACTGGGGAAACGGCCAGCCAGAAGGAAAGGTTCTCGACGTCAAGGAAGACACAGCCACGGTTAAGACGAAAAGG
GGCAACCAAGTCAGTCGGCATGGTGACTCTGCCAATCCAGCAGTTGTGCTGGACACGGGCAAGTCAAAGGCTATC
AAGCTATCGAATGAGCTCAACGAGACATGA
Transcript >OphauB2|6680
ATGAAGGACCAAGAGACTGTGATTGAAGAGTTCAACGACATTGTCAACATGTCGGCTTCAGAGCTGGAAGACTGG
CTCAAGTCAGATGACTCGCAAAGCGCTGGTTGGGCCAAGGAAGACGGAGATGGAGAGTCAGTCGGGCATGACAGT
GGTCGAAATATCATCAGCATTCTCAAATCGAACCCCGATAAAGACCCCGACAAGTATACAGAAGAACAGGTGGAG
CATATGCGCAAAGTAGTGTCTTACTGCAAGCGACACCTGGCCCAAGAGGAAAAAGCAAACAGCAAAAAGTCGGCT
GCAGAGGTCAAGAAGACCAAGTCCTACGCCTCGTTAAAAAATTGGGGGCACGACTTGTTGAAAAAGTCAAAAACC
TCAAACGGTGACGAGAAACAGGACAAGAATGGAGAGAAGCACACAGGAGAAAAGAGAAAGGCAGTTCCTGACGGA
GAGGGCAGTGCCAATAAGAAGAGGGAGACGGAAAAGGGCAAGTCGCGCGATGATGACGGAAGCGGCAAAGACAAG
GAAGAAACCAATAGCAAGGATGCCAAGGCCAATGGGCACAACGAAGGCAAAGACGAGGAGAAGAAGACTCGGGAA
AACAAGCAGCAAGAGGATGAAGAGGATGAAGAGGAAGTGAGCGAGGAGGACGCAGACGAGGAGCCACAACCAAAG
AGTGCAAAAGACACGGGCGAACCGGGTTCCAACGGGGCAAGCAAAGGTCCCGATACTGGCGACACGGTCAGCTGG
AACTGGGGAAACGGCCAGCCAGAAGGAAAGGTTCTCGACGTCAAGGAAGACACAGCCACGGTTAAGACGAAAAGG
GGCAACCAAGTCAGTCGGCATGGTGACTCTGCCAATCCAGCAGTTGTGCTGGACACGGGCAAGTCAAAGGCTATC
AAGCTATCGAATGAGCTCAACGAGACATGA
Gene >OphauB2|6680
ATGAAGGACCAAGAGACTGTGATTGAAGAGTTCAACGACATTGTCAACATGTCGGCTTCAGAGCTGGAAGACTGG
CTCAAGTCAGATGACTCGCAAAGCGCTGGTTGGGCCAAGGAAGACGGAGATGGAGAGTCAGTCGGGCATGACAGT
GGTCGAAATATCATCAGCATTCTCAAATCGAACCCCGATAAAGACCCCGACAAGTATACAGAAGAACAGGTGGAG
CATATGCGCAAAGTAGTGTCTTACTGGTAGGCCCAGATGCTGATCAATTGACGAGCTTCGTCGTACGACTGCTGA
CTAGATTACGAATTGCCTGCAGCAAGCGACACCTGGCCCAAGAGGAAAAAGCAAACAGCAAAAAGTCGGCTGCAG
AGGTCAAGAAGACCAAGTCCTACGCCTCGTTAAAAAATTGGGGGCACGACTTGTTGAAAAAGTCAAAAACCTCAA
ACGGTGACGAGAAACAGGACAAGAATGGAGAGAAGCACACAGGAGAAAAGAGAAAGGCAGTTCCTGACGGAGAGG
GCAGTGCCAATAAGAAGAGGGAGACGGAAAAGGGCAAGTCGCGCGATGATGACGGAAGCGGCAAAGACAAGGAAG
AAACCAATAGCAAGGATGCCAAGGCCAATGGGCACAACGAAGGCAAAGACGAGGAGAAGAAGACTCGGGAAAACA
AGCAGCAAGAGGATGAAGAGGATGAAGAGGAAGTGAGCGAGGAGGACGCAGACGAGGAGCCACAACCAAAGAGTG
CAAAAGACACGGGCGAACCGGGTTCCAACGGGGCAAGCAAAGGTCCCGATACTGGCGACACGGTCAGCTGGAACT
GGGGAAACGGCCAGCCAGAAGGAAAGGTTCTCGACGTCAAGGAAGACACGTATGTTGACTCATGACGAACAAGAC
GACGAAGCTGACTGCATGATAGAGCCACGGTTAAGACGAAAAGGGGCAACCAAGTCAGTCGGCATGGTGACTCTG
CCAATCCAGCAGTTGTGCTGGACACGGGCAAGTCAAAGGCTATCAAGCTATCGAATGAGCTCAACGAGACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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