© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6652 |
| Gene name | |
| Location | Contig_62:77956..78512 |
| Strand | + |
| Gene length (bp) | 556 |
| Transcript length (bp) | 327 |
| Coding sequence length (bp) | 327 |
| Protein length (aa) | 109 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 1.2E-09 | 1 | 63 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 1 | 108 | 1.0E-18 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 1 | 78 | 1.0E-14 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 1 | 78 | 2.0E-14 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 1 | 78 | 3.0E-14 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 1 | 100 | 2.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40900|ISP4_SCHPO | Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 | 1 | 108 | 1.0E-18 |
| sp|Q9FME8|OPT4_ARATH | Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=1 SV=1 | 1 | 78 | 1.0E-14 |
| sp|Q9FG72|OPT1_ARATH | Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 | 1 | 78 | 2.0E-14 |
| sp|Q9SUA4|OPT5_ARATH | Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 | 1 | 78 | 3.0E-14 |
| sp|O14031|PGT1_SCHPO | Glutathione transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pgt1 PE=1 SV=1 | 1 | 100 | 2.0E-12 |
| sp|O04514|OPT2_ARATH | Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 | 1 | 78 | 1.0E-11 |
| sp|Q9T095|OPT6_ARATH | Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 | 1 | 76 | 2.0E-11 |
| sp|Q9FJD1|OPT8_ARATH | Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 | 1 | 76 | 2.0E-11 |
| sp|Q7LL00|YQJC_SCHPO | Uncharacterized oligopeptide transporter C1840.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1840.12 PE=3 SV=2 | 1 | 104 | 4.0E-11 |
| sp|O82485|OPT7_ARATH | Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 | 1 | 79 | 5.0E-10 |
| sp|Q9FJD2|OPT9_ARATH | Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 | 1 | 76 | 6.0E-10 |
| sp|O23482|OPT3_ARATH | Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 | 2 | 90 | 2.0E-09 |
| sp|P40897|OPT1_YEAST | Oligopeptide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPT1 PE=1 SV=1 | 2 | 85 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 30 | 17 |
| 2 | 43 | 65 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6652 MFGAAGQIPPATLYFLWQWVIIGFLFNGFIKRRFFGWWSRYNYVTSGALDIGTAFCTVIVGLALGLSESNFPDWW GTRVWQNTLDFNGTAVTRQFIPNVTQPIGPETW* |
| Coding | >OphauB2|6652 ATGTTTGGAGCGGCCGGCCAGATCCCTCCGGCCACTCTCTACTTTCTCTGGCAATGGGTCATTATCGGCTTCTTG TTCAACGGCTTCATCAAGAGGCGCTTCTTTGGATGGTGGTCCCGCTACAACTACGTCACCTCTGGCGCCCTCGAC ATTGGCACCGCCTTTTGCACCGTCATTGTCGGCCTCGCACTGGGCCTCAGCGAGTCCAACTTTCCCGACTGGTGG GGGACTCGCGTCTGGCAAAACACGCTCGACTTTAACGGCACCGCCGTCACGCGACAATTCATCCCCAACGTCACC CAGCCCATTGGGCCCGAGACGTGGTAG |
| Transcript | >OphauB2|6652 ATGTTTGGAGCGGCCGGCCAGATCCCTCCGGCCACTCTCTACTTTCTCTGGCAATGGGTCATTATCGGCTTCTTG TTCAACGGCTTCATCAAGAGGCGCTTCTTTGGATGGTGGTCCCGCTACAACTACGTCACCTCTGGCGCCCTCGAC ATTGGCACCGCCTTTTGCACCGTCATTGTCGGCCTCGCACTGGGCCTCAGCGAGTCCAACTTTCCCGACTGGTGG GGGACTCGCGTCTGGCAAAACACGCTCGACTTTAACGGCACCGCCGTCACGCGACAATTCATCCCCAACGTCACC CAGCCCATTGGGCCCGAGACGTGGTAG |
| Gene | >OphauB2|6652 ATGTTTGGAGCGGCCGGCCAGATCCCTCCGGCCACTCTCTACTTTCTCTGGCAATGGGTCATTATCGGCTTCTTG TTCAACGGCTTCATCAAGAGGCGCTTCTTTGGATGGTGGTGTACGTTTGTCCCTGACTGCTTCCACTTTTCTGTC TTTTCACATCCACATTCTCCTGTCTCTTTTTTTTTTCCTCCTCCTTACATTTTTACACGTCTTTTATATCATTTC ACGCACAGTGTTGTCTCCTCGTCTACTTTGTTCCTGTTACTCTGCCGTCTTCATCTTGGTCCCCTCAACGTCTCG CCTTGCTTCCTCTTTTGGCCTTTTTTGCTGACACGGCTCTTCAGCCCGCTACAACTACGTCACCTCTGGCGCCCT CGACATTGGCACCGCCTTTTGCACCGTCATTGTCGGCCTCGCACTGGGCCTCAGCGAGTCCAACTTTCCCGACTG GTGGGGGACTCGCGTCTGGCAAAACACGCTCGACTTTAACGGCACCGCCGTCACGCGACAATTCATCCCCAACGT CACCCAGCCCATTGGGCCCGAGACGTGGTAG |