© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6597 |
| Gene name | |
| Location | Contig_61:33731..36514 |
| Strand | - |
| Gene length (bp) | 2783 |
| Transcript length (bp) | 2400 |
| Coding sequence length (bp) | 2400 |
| Protein length (aa) | 800 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05024 | Gpi1 | N-acetylglucosaminyl transferase component (Gpi1) | 1.1E-113 | 386 | 661 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14357|GPI1_SCHPO | N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi1 PE=2 SV=1 | 96 | 754 | 2.0E-123 |
| sp|P53306|GPI1_YEAST | Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI1 PE=1 SV=1 | 215 | 764 | 4.0E-73 |
| sp|Q9QYT7|PIGQ_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q OS=Mus musculus GN=Pigq PE=1 SV=3 | 450 | 667 | 1.0E-50 |
| sp|Q9BRB3|PIGQ_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q OS=Homo sapiens GN=PIGQ PE=1 SV=3 | 396 | 659 | 4.0E-44 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0036211 | protein modification process | No |
| GO:0045017 | glycerolipid biosynthetic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:1903509 | liposaccharide metabolic process | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0006664 | glycolipid metabolic process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006497 | protein lipidation | No |
| GO:0046474 | glycerophospholipid biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0046467 | membrane lipid biosynthetic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0006661 | phosphatidylinositol biosynthetic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0005575 | cellular_component | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006650 | glycerophospholipid metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0006629 | lipid metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0046486 | glycerolipid metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0008654 | phospholipid biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0009247 | glycolipid biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006505 | GPI anchor metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0046488 | phosphatidylinositol metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 23 | 19 |
| 2 | 43 | 65 | 22 |
| 3 | 334 | 356 | 22 |
| 4 | 426 | 448 | 22 |
| 5 | 490 | 512 | 22 |
| 6 | 519 | 538 | 19 |
| 7 | 600 | 622 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6597 MHPFSILTLGIFVAGYITARWDLVTRLYELAIFAAEYGVVTRAARGVVGLTALFLSISVPVVLLARKETRLHPRT PGVGVSAREQLRRREHDGLMRVFWPTDACKSDEPGVIVGWRNSTLDVFVVAILDGLDAHDVEFHFKLGTFFRNCP HSPGRIYEVCGHSSMHVLGVSNAPLPATADASWFRATTWTTSSSKRPIISCDKASSIQLILYDRPHPNRMQYISL EPIALALGDKGLGLETSSGDGPDGQGKKQEMKRKLVEKLKLHTITKRALSARDRALTKIVNQVNWSWELEQVLQR NAARVGPRPKRSLSVSERVVESAASMRNYVLGQLWLLFTLYIFPVVRRAFCLVLLAHRLAAEVLLVMLEFRPKPG GAALKDISATAQQIEIRLQQFCYWPMQYTTLRQRKMTWASVTTSNPDYIRFYNSLWLVANDVIIGMALGSYIIEH SNWVASQIGHILRTYAVDALQRSISWLMGWPAGLKLNGELAAFLGDLFLWVIHYWSNCLEVLSPVLPRLVWFIGF SSFAGASMPVALLSDLVSLLTIHIHSFYLASARIYHWQLTILQSLFHLFRGKKHNVLRNRIDSCDYDLDQLLVGT ILFTLLFFLLPTVVVFYLNFAIARMIIISMKAGFDTLLSCLNHFPLFALMLRVKDPRRLPGGIRFELRHDNEYKA TDASTCHEPPTSVIYLKAIPLTFGAMFHQYSQMAHRIRKHYLSPGVLLCLLTGQFVPPLNRKNLYSLQYSMLPAT RASVWEMWRAVNIELPHKRQVQLPPRPWPLNGKRTVSNGRIRSHHKAVS* |
| Coding | >OphauB2|6597 ATGCACCCCTTTTCCATCCTGACGCTGGGCATTTTTGTAGCTGGCTACATCACGGCACGCTGGGATCTCGTCACG CGTCTCTATGAACTGGCTATTTTTGCTGCAGAGTACGGTGTTGTGACGCGTGCAGCTCGGGGAGTAGTGGGCTTG ACTGCCTTATTCCTAAGTATTTCAGTTCCAGTGGTCCTTTTGGCCAGAAAAGAGACACGCTTGCATCCGCGGACG CCTGGGGTTGGTGTGTCTGCTCGCGAGCAGTTGAGACGACGTGAGCATGATGGTCTGATGCGAGTCTTTTGGCCC ACTGACGCCTGCAAGTCTGACGAGCCGGGAGTCATCGTGGGGTGGAGGAATTCGACTCTTGATGTCTTTGTCGTT GCTATCCTCGATGGCCTTGACGCCCACGATGTCGAGTTTCATTTCAAGCTGGGCACTTTTTTTCGCAACTGCCCC CATTCCCCGGGTCGCATCTACGAGGTCTGTGGCCACTCGTCAATGCATGTCCTGGGAGTCTCCAATGCGCCTCTA CCGGCAACTGCCGACGCTTCGTGGTTCCGAGCCACTACCTGGACGACGTCGTCTTCAAAACGGCCAATTATTTCT TGTGACAAGGCATCAAGCATTCAGCTCATCCTCTATGACAGGCCCCACCCCAATCGTATGCAGTACATCTCGCTT GAGCCCATAGCCCTGGCTCTGGGCGACAAGGGACTTGGACTTGAAACTAGCAGCGGTGATGGACCTGATGGCCAG GGAAAAAAGCAGGAAATGAAGCGCAAGCTGGTGGAGAAACTCAAGCTGCATACAATTACCAAGCGTGCACTGTCT GCCCGGGACAGAGCTCTAACAAAGATTGTCAACCAAGTCAACTGGTCCTGGGAGCTGGAGCAGGTGCTGCAGAGG AACGCAGCAAGAGTAGGCCCGCGGCCCAAGCGCAGTCTGAGTGTTTCCGAGAGAGTGGTCGAGTCGGCTGCGTCG ATGCGCAACTACGTGCTTGGCCAACTGTGGCTGCTCTTTACGCTCTATATTTTCCCTGTAGTACGACGGGCATTC TGCCTCGTTCTGTTAGCCCACCGTCTGGCTGCCGAGGTGCTGTTGGTTATGCTCGAGTTTCGGCCCAAGCCAGGA GGCGCGGCACTCAAGGATATCTCGGCAACGGCCCAGCAGATTGAGATACGCCTCCAGCAGTTTTGCTACTGGCCC ATGCAGTACACGACTCTACGCCAGCGCAAAATGACATGGGCCAGCGTGACAACGAGCAACCCCGACTACATCCGC TTCTACAACAGCCTGTGGCTCGTTGCCAACGATGTCATTATCGGCATGGCTTTGGGCTCGTACATTATAGAACAC TCGAATTGGGTAGCATCGCAGATTGGGCACATCTTGCGCACCTATGCCGTTGACGCTCTGCAGCGAAGCATCTCG TGGCTGATGGGCTGGCCAGCTGGTCTCAAGCTTAATGGCGAGCTGGCGGCATTTCTAGGAGACTTGTTCCTTTGG GTCATCCATTACTGGTCGAACTGCCTAGAGGTGTTGAGTCCAGTGCTGCCGCGCCTGGTCTGGTTCATTGGCTTT TCATCGTTTGCCGGCGCCAGCATGCCTGTGGCTCTCTTGTCGGACCTTGTCTCCCTCTTGACGATCCACATCCAC TCATTCTATCTGGCCTCGGCTCGCATCTATCACTGGCAACTGACCATTTTGCAGTCTCTTTTCCACCTCTTTCGC GGCAAGAAGCACAATGTACTCCGTAACCGCATTGATTCATGCGACTATGATCTTGACCAACTCCTTGTCGGCACC ATTCTCTTTACCCTCCTCTTCTTTCTGCTCCCAACAGTGGTTGTCTTTTACCTCAATTTTGCCATTGCCCGAATG ATCATCATCTCGATGAAGGCGGGCTTCGACACGCTGCTATCCTGCCTCAATCACTTTCCGCTTTTTGCTCTCATG TTGAGGGTCAAAGACCCAAGACGGCTTCCCGGGGGGATTCGCTTTGAACTGCGACATGACAACGAATACAAGGCG ACAGATGCTTCGACTTGCCATGAGCCGCCAACGTCTGTCATTTACCTCAAGGCCATACCCCTGACTTTTGGCGCC ATGTTCCACCAGTATTCCCAAATGGCACATCGTATTAGAAAACATTACCTGTCACCTGGAGTGCTACTCTGTCTG CTGACGGGCCAGTTCGTCCCGCCGTTGAATAGGAAAAACCTGTACAGCCTGCAGTACAGCATGCTGCCGGCAACA CGAGCAAGTGTGTGGGAAATGTGGCGTGCCGTCAACATTGAGCTGCCGCACAAGAGACAGGTTCAGCTCCCCCCC AGGCCGTGGCCACTGAATGGCAAGCGCACGGTTAGCAACGGGAGAATAAGGTCGCATCACAAAGCCGTGTCTTGA |
| Transcript | >OphauB2|6597 ATGCACCCCTTTTCCATCCTGACGCTGGGCATTTTTGTAGCTGGCTACATCACGGCACGCTGGGATCTCGTCACG CGTCTCTATGAACTGGCTATTTTTGCTGCAGAGTACGGTGTTGTGACGCGTGCAGCTCGGGGAGTAGTGGGCTTG ACTGCCTTATTCCTAAGTATTTCAGTTCCAGTGGTCCTTTTGGCCAGAAAAGAGACACGCTTGCATCCGCGGACG CCTGGGGTTGGTGTGTCTGCTCGCGAGCAGTTGAGACGACGTGAGCATGATGGTCTGATGCGAGTCTTTTGGCCC ACTGACGCCTGCAAGTCTGACGAGCCGGGAGTCATCGTGGGGTGGAGGAATTCGACTCTTGATGTCTTTGTCGTT GCTATCCTCGATGGCCTTGACGCCCACGATGTCGAGTTTCATTTCAAGCTGGGCACTTTTTTTCGCAACTGCCCC CATTCCCCGGGTCGCATCTACGAGGTCTGTGGCCACTCGTCAATGCATGTCCTGGGAGTCTCCAATGCGCCTCTA CCGGCAACTGCCGACGCTTCGTGGTTCCGAGCCACTACCTGGACGACGTCGTCTTCAAAACGGCCAATTATTTCT TGTGACAAGGCATCAAGCATTCAGCTCATCCTCTATGACAGGCCCCACCCCAATCGTATGCAGTACATCTCGCTT GAGCCCATAGCCCTGGCTCTGGGCGACAAGGGACTTGGACTTGAAACTAGCAGCGGTGATGGACCTGATGGCCAG GGAAAAAAGCAGGAAATGAAGCGCAAGCTGGTGGAGAAACTCAAGCTGCATACAATTACCAAGCGTGCACTGTCT GCCCGGGACAGAGCTCTAACAAAGATTGTCAACCAAGTCAACTGGTCCTGGGAGCTGGAGCAGGTGCTGCAGAGG AACGCAGCAAGAGTAGGCCCGCGGCCCAAGCGCAGTCTGAGTGTTTCCGAGAGAGTGGTCGAGTCGGCTGCGTCG ATGCGCAACTACGTGCTTGGCCAACTGTGGCTGCTCTTTACGCTCTATATTTTCCCTGTAGTACGACGGGCATTC TGCCTCGTTCTGTTAGCCCACCGTCTGGCTGCCGAGGTGCTGTTGGTTATGCTCGAGTTTCGGCCCAAGCCAGGA GGCGCGGCACTCAAGGATATCTCGGCAACGGCCCAGCAGATTGAGATACGCCTCCAGCAGTTTTGCTACTGGCCC ATGCAGTACACGACTCTACGCCAGCGCAAAATGACATGGGCCAGCGTGACAACGAGCAACCCCGACTACATCCGC TTCTACAACAGCCTGTGGCTCGTTGCCAACGATGTCATTATCGGCATGGCTTTGGGCTCGTACATTATAGAACAC TCGAATTGGGTAGCATCGCAGATTGGGCACATCTTGCGCACCTATGCCGTTGACGCTCTGCAGCGAAGCATCTCG TGGCTGATGGGCTGGCCAGCTGGTCTCAAGCTTAATGGCGAGCTGGCGGCATTTCTAGGAGACTTGTTCCTTTGG GTCATCCATTACTGGTCGAACTGCCTAGAGGTGTTGAGTCCAGTGCTGCCGCGCCTGGTCTGGTTCATTGGCTTT TCATCGTTTGCCGGCGCCAGCATGCCTGTGGCTCTCTTGTCGGACCTTGTCTCCCTCTTGACGATCCACATCCAC TCATTCTATCTGGCCTCGGCTCGCATCTATCACTGGCAACTGACCATTTTGCAGTCTCTTTTCCACCTCTTTCGC GGCAAGAAGCACAATGTACTCCGTAACCGCATTGATTCATGCGACTATGATCTTGACCAACTCCTTGTCGGCACC ATTCTCTTTACCCTCCTCTTCTTTCTGCTCCCAACAGTGGTTGTCTTTTACCTCAATTTTGCCATTGCCCGAATG ATCATCATCTCGATGAAGGCGGGCTTCGACACGCTGCTATCCTGCCTCAATCACTTTCCGCTTTTTGCTCTCATG TTGAGGGTCAAAGACCCAAGACGGCTTCCCGGGGGGATTCGCTTTGAACTGCGACATGACAACGAATACAAGGCG ACAGATGCTTCGACTTGCCATGAGCCGCCAACGTCTGTCATTTACCTCAAGGCCATACCCCTGACTTTTGGCGCC ATGTTCCACCAGTATTCCCAAATGGCACATCGTATTAGAAAACATTACCTGTCACCTGGAGTGCTACTCTGTCTG CTGACGGGCCAGTTCGTCCCGCCGTTGAATAGGAAAAACCTGTACAGCCTGCAGTACAGCATGCTGCCGGCAACA CGAGCAAGTGTGTGGGAAATGTGGCGTGCCGTCAACATTGAGCTGCCGCACAAGAGACAGGTTCAGCTCCCCCCC AGGCCGTGGCCACTGAATGGCAAGCGCACGGTTAGCAACGGGAGAATAAGGTCGCATCACAAAGCCGTGTCTTGA |
| Gene | >OphauB2|6597 ATGCACCCCTTTTCCATCCTGACGCTGGGCATTTTTGTAGCTGGCTACATCACGGCACGCTGGGATCTCGTCACG CGTCTCTATGAACTGGCTATTTTTGCTGCAGAGTACGGTGTTGTGGTGAGCTCAAGTCGTCTTTTAATTTAATGG TGCTACTTCTCTGACTTTTTTTTTTAAATTAATTTTTAGACGCGTGCAGCTCGGGGAGTAGTGGGCTTGACTGCC TTATTCCTAAGTATTTCAGTTCCAGTGGTCCTTTTGGCCAGAAAAGAGACACGCTTGGTGTGTTGCTAGAATCGC TTACAAGAAATATTTTACTAACGAGGTGATAGCATCCGCGGACGCCTGGGGTTGGTGTGTCTGCTCGCGAGCAGT TGAGACGACGTGGTTCGTTCTAAAGACTGAAAGCTCATAACCTCTGCTTGTCATGGTAGAGCATGATGGTCTGAT GCGAGTCTTTTGGCCCACTGACGCCTGCAAGTCTGACGAGCCGGGAGTCATCGTGGGGTGGAGGAATTCGACTCT TGATGTCTTTGTCGTTGCTATCCTCGATGGCCTTGACGTAGGTTGTTATGAAGCCCGAGGGAACGCCACTGACCC TGTATAGGCCCACGATGTCGAGTTTCATTTCAAGCTGGGCACTTTTTTTCGCAACTGCCCCCATTCCCCGGGTCG CATCTACGAGGTCTGTGGCCACTCGTCAATGCATGTCCTGGGAGTCTCCAATGCGCCTCTACCGGCAACTGCCGA CGCTTCGTGGTTCCGAGCCACTACCTGGACGACGTCGTCTTCAAAACGGCCAATTATTTCTTGTGACAAGGCATC AAGCATTCAGCTCATCCTCTATGACAGGCCCCACCCCAATCGTATGCAGTACATCTCGCTTGAGCCCATAGCCCT GGCTCTGGGCGACAAGGGACTTGGACTTGAAACTAGCAGCGGTGATGGACCTGATGGCCAGGGAAAAAAGCAGGA AATGAAGCGCAAGCTGGTGGAGAAACTCAAGCTGCATACAATTACCAAGCGTGCACTGTCTGCCCGGGACAGAGC TCTAACAAAGATTGTCAACCAAGTCAACTGGTCCTGGGAGCTGGAGCAGGTGCTGCAGAGGAACGCAGCAAGAGT AGGCCCGCGGCCCAAGCGCAGTCTGAGTGTTTCCGAGAGAGTGGTCGAGTCGGCTGCGTCGATGCGCAACTACGT GCTTGGCCAACTGTGGCTGCTCTTTACGCTCTATATTTTCCCTGTAGTACGACGGGCATTCTGCCTCGTTCTGTT AGCCCACCGTCTGGCTGCCGAGGTGCTGTTGGTTATGCTCGAGTTTCGGCCCAAGCCAGGAGGCGCGGCACTCAA GGATATCTCGGCAACGGCCCAGCAGATTGAGATACGCCTCCAGCAGTTTTGCTACTGGCCCATGCAGTACACGAC TCTACGCCAGCGCAAAATGACATGGGCCAGCGTGACAACGAGCAACCCCGACTACATCCGCTTCTACAACAGCCT GTGGCTCGTTGCCAACGATGTCATTATCGGCATGGCTTTGGGCTCGTACATTATAGAACACTCGAATTGGGTAGC ATCGCAGATTGGGCACATCTTGCGCACCTATGCCGTTGACGCTCTGCAGCGAAGCATCTCGTGGCTGATGGGCTG GCCAGCTGGTCTCAAGCTTAATGGCGAGCTGGCGGCATTTCTAGGAGACTTGTTCCTTTGGGTCATCCATTACTG GTCGAGTAAGTTTGATGGCGCTCGATATTAGTGCCAAGGTGCTGGCTGACATGGAGACAGACTGCCTAGAGGTGT TGAGTCCAGTGCTGCCGCGCCTGGTCTGGTTCATTGGCTTTTCATCGTTTGCCGGCGCCAGCATGCCTGTGGCTC TCTTGTCGGACCTTGTCTCCCTCTTGACGATCCACATCCACTCATTCTATCTGGCCTCGGCTCGCATCTATCACT GGCAACTGACCATTTTGCAGTCTCTTTTCCACCTCTTTCGCGGCAAGAAGCACAATGTACTCCGTAACCGCATTG ATTCATGCGACTATGATCTTGACCAACTCCTTGTCGGCACCATTCTCTTTACCCTCCTCTTCTTTCTGCTCCCAA CAGTGGTTGTCTTTTACCTCAATTTTGCCATTGCCCGAATGATCATCATCTCGATGAAGGCGGGCTTCGACACGC TGCTATCCTGCCTCAATCACTTTCCGCTTTTTGCTCTCATGTTGAGGGTCAAAGACCCAAGACGGCTTCCCGGTG AGTCTGCGCGCAGATTCGAGCATTGGCTTCGATTCGCTGACGGTGACAGGGGGGATTCGCTTTGAACTGCGACAT GACAACGAATACAAGGCGACAGATGCTTCGACTTGCCATGAGCCGCCAACGTCTGTCATTTACCTCAAGGTTTGC TTGCTCTTTGCACAAGATATGGCAGGGGGGAGTTTGACTGACGGCGCTATCGGAGACAGGCCATACCCCTGACTT TTGGCGCCATGTTCCACCAGTATTCCCAAATGGCACATCGTATTAGAAAACATTACCTGTCACCTGGAGTGCTAC TCTGTCTGCTGACGGGCCAGTTCGTCCCGCCGTTGAATAGGAAAAACCTGTACAGCCTGCAGTACAGCATGCTGC CGGCAACACGAGCAAGTGTGTGGGAAATGTGGCGTGCCGTCAACATTGAGCTGCCGCACAAGAGACAGGTTCAGC TCCCCCCCAGGCCGTGGCCACTGAATGGCAAGCGCACGGTTAGCAACGGGAGAATAAGGTCGCATCACAAAGCCG TGTCTTGA |