Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6573
Gene name
LocationContig_60:76519..77447
Strand-
Gene length (bp)928
Transcript length (bp)642
Coding sequence length (bp)642
Protein length (aa) 214

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05241 EBP EXPERA (EXPanded EBP superfamily) 1.2E-23 87 195

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 3 205 2.0E-41
sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 3 213 2.0E-39
sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 3 213 4.0E-37
sp|Q9JJ46|EBP_RAT 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 3 202 9.0E-37
sp|Q9FTZ2|EBP_ORYSJ Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 2 211 4.0E-29
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 3 205 2.0E-41
sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 3 213 2.0E-39
sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 3 213 4.0E-37
sp|Q9JJ46|EBP_RAT 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 3 202 9.0E-37
sp|Q9FTZ2|EBP_ORYSJ Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 2 211 4.0E-29
sp|O48962|EBP_ARATH Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1 1 199 2.0E-21
sp|Q9BY08|EBPL_HUMAN Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 42 200 4.0E-21
sp|Q9D0P0|EBPL_MOUSE Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 42 200 7.0E-21
sp|Q55E32|EBP_DICDI Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Dictyostelium discoideum GN=ebp PE=2 SV=1 51 213 3.0E-11
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 22 41 19
2 53 75 22
3 109 131 22
4 138 160 22
5 170 192 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6573
MPHPYYPPSAHIAGFAPNVSPLWQLLPLFGAVLTPVVAGAYRLSRGQALLDRLAAAWFALCGFLHVAFEGYYVVN
RSSIAASQAVPAQLWKEYALSDSRYLTLDVFTVCVETLTTLILGPLCCFCLVAILCNWPARHALQSIVCTMHLYG
VALYYATSLAEDVSYSRPEPLYFWLYYVGFNAPWVFVPLLLLRDSYSQIKAAFKTAGLKPKSS*
Coding >OphauB2|6573
ATGCCGCACCCCTACTATCCCCCCTCGGCGCACATTGCCGGCTTTGCTCCCAATGTCTCTCCGCTCTGGCAGCTG
CTGCCGCTGTTTGGTGCCGTCTTGACGCCTGTAGTTGCTGGCGCCTATCGTCTGTCTCGAGGCCAAGCACTGCTG
GACCGCCTTGCTGCTGCTTGGTTCGCACTGTGTGGCTTCTTGCATGTAGCCTTTGAAGGATACTATGTCGTCAAC
CGCTCCTCCATTGCCGCATCGCAGGCAGTGCCGGCCCAGCTGTGGAAAGAGTATGCCTTGTCAGACTCACGCTAT
CTGACCTTGGACGTCTTTACCGTTTGTGTTGAGACTCTGACGACGCTCATCCTCGGCCCTCTCTGCTGCTTCTGT
CTAGTAGCTATTTTGTGTAACTGGCCAGCCCGCCATGCCTTGCAATCGATTGTCTGCACAATGCATCTCTACGGT
GTGGCTCTCTACTATGCCACAAGCCTGGCTGAAGACGTGTCATACAGCCGCCCCGAGCCGCTTTACTTTTGGCTC
TACTACGTTGGCTTTAATGCCCCCTGGGTCTTTGTCCCGCTCCTGTTGCTCCGTGATAGCTACTCCCAAATCAAG
GCGGCCTTTAAGACGGCTGGCCTCAAGCCCAAGAGCAGCTGA
Transcript >OphauB2|6573
ATGCCGCACCCCTACTATCCCCCCTCGGCGCACATTGCCGGCTTTGCTCCCAATGTCTCTCCGCTCTGGCAGCTG
CTGCCGCTGTTTGGTGCCGTCTTGACGCCTGTAGTTGCTGGCGCCTATCGTCTGTCTCGAGGCCAAGCACTGCTG
GACCGCCTTGCTGCTGCTTGGTTCGCACTGTGTGGCTTCTTGCATGTAGCCTTTGAAGGATACTATGTCGTCAAC
CGCTCCTCCATTGCCGCATCGCAGGCAGTGCCGGCCCAGCTGTGGAAAGAGTATGCCTTGTCAGACTCACGCTAT
CTGACCTTGGACGTCTTTACCGTTTGTGTTGAGACTCTGACGACGCTCATCCTCGGCCCTCTCTGCTGCTTCTGT
CTAGTAGCTATTTTGTGTAACTGGCCAGCCCGCCATGCCTTGCAATCGATTGTCTGCACAATGCATCTCTACGGT
GTGGCTCTCTACTATGCCACAAGCCTGGCTGAAGACGTGTCATACAGCCGCCCCGAGCCGCTTTACTTTTGGCTC
TACTACGTTGGCTTTAATGCCCCCTGGGTCTTTGTCCCGCTCCTGTTGCTCCGTGATAGCTACTCCCAAATCAAG
GCGGCCTTTAAGACGGCTGGCCTCAAGCCCAAGAGCAGCTGA
Gene >OphauB2|6573
ATGCCGCACCCCTACTATCCCCCCTCGGCGCACATTGCCGGCTTTGCTCCCAATGTCTCTCCGCTCTGGCAGCTG
CTGCCGCTGTTTGGTGCCGTCTTGACGCCTGTAGTTGCTGGCGCCTATCGTCTGTCTCGAGGCCAAGCACTGCTG
GACCGCCTTGCTGCTGCTTGGTTCGCACTGTGTAAGTAGGCTGGCAGAGGAGCATAACAACTTGTTAATTCCTAC
ATGTGCAATTTGCTCTCACGGCGTCAGACTAATGCCGAATAGGTGGCTTCTTGCATGTAGCCTTTGAAGGTAGCA
TTCCACTACATGCCTCGTATATACACTTCTCACGACAATGGAAGCCATGTTGACTTGGGACTCCTGGGCCAGGAT
ACTATGTCGTCAACCGCTCCTCCATTGCCGCATCGCAGGCAGTGCCGGCCCAGCTGTGGAAAGAGTATGCCTTGT
CAGACTCACGCTATCTGACCTTGGACGTCTTTACCGTTTGTGTTGAGACTCTGACGACGGTATGCCTTGGCTTCT
TGACGTTGTGTCTTGTTCGACTAACCTGGTAGTCTCGTCCAGCTCATCCTCGGCCCTCTCTGCTGCTTCTGTCTA
GTAGCTATTTTGTGTAACTGGCCAGCCCGCCATGCCTTGCAATCGATTGTCTGCACAATGCATCTCTACGGTGTG
GCTCTCTACTATGCCACAAGCCTGGCTGAAGACGTGTCATACAGCCGCCCCGAGCCGCTTTACTTTTGGCTCTAC
TACGTTGGCTTTAATGCCCCCTGGGTCTTTGTCCCGCTCCGTCTGTCTCTCTGTCCGGGCCCTGTTGGCTTTTGA
AGACCAAGACTGACTTGGCTTGTGCGCAGTGTTGCTCCGTGATAGCTACTCCCAAATCAAGGCGGCCTTTAAGAC
GGCTGGCCTCAAGCCCAAGAGCAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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