Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6504
Gene name
LocationContig_6:200848..203140
Strand-
Gene length (bp)2292
Transcript length (bp)2292
Coding sequence length (bp)2292
Protein length (aa) 764

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03068 PAD Protein-arginine deiminase (PAD) 1.1E-82 231 537
PF03068 PAD Protein-arginine deiminase (PAD) 3.2E-27 672 759

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Z183|PADI4_MOUSE Protein-arginine deiminase type-4 OS=Mus musculus GN=Padi4 PE=2 SV=3 232 528 2.0E-26
sp|O88807|PADI4_RAT Protein-arginine deiminase type-4 OS=Rattus norvegicus GN=Padi4 PE=2 SV=1 232 528 8.0E-26
sp|Q9Y2J8|PADI2_HUMAN Protein-arginine deiminase type-2 OS=Homo sapiens GN=PADI2 PE=1 SV=2 233 528 1.0E-25
sp|P20717|PADI2_RAT Protein-arginine deiminase type-2 OS=Rattus norvegicus GN=Padi2 PE=1 SV=1 53 528 8.0E-25
sp|Q9ULC6|PADI1_HUMAN Protein-arginine deiminase type-1 OS=Homo sapiens GN=PADI1 PE=2 SV=2 233 534 2.0E-24
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q9Z183|PADI4_MOUSE Protein-arginine deiminase type-4 OS=Mus musculus GN=Padi4 PE=2 SV=3 232 528 2.0E-26
sp|O88807|PADI4_RAT Protein-arginine deiminase type-4 OS=Rattus norvegicus GN=Padi4 PE=2 SV=1 232 528 8.0E-26
sp|Q9Y2J8|PADI2_HUMAN Protein-arginine deiminase type-2 OS=Homo sapiens GN=PADI2 PE=1 SV=2 233 528 1.0E-25
sp|P20717|PADI2_RAT Protein-arginine deiminase type-2 OS=Rattus norvegicus GN=Padi2 PE=1 SV=1 53 528 8.0E-25
sp|Q9ULC6|PADI1_HUMAN Protein-arginine deiminase type-1 OS=Homo sapiens GN=PADI1 PE=2 SV=2 233 534 2.0E-24
sp|P70708|PADI3_RAT Protein-arginine deiminase type-3 OS=Rattus norvegicus GN=Padi3 PE=2 SV=1 80 528 3.0E-24
sp|Q08642|PADI2_MOUSE Protein-arginine deiminase type-2 OS=Mus musculus GN=Padi2 PE=1 SV=2 41 528 3.0E-24
sp|Q9Z184|PADI3_MOUSE Protein-arginine deiminase type-3 OS=Mus musculus GN=Padi3 PE=1 SV=2 80 528 1.0E-23
sp|Q9UM07|PADI4_HUMAN Protein-arginine deiminase type-4 OS=Homo sapiens GN=PADI4 PE=1 SV=2 66 528 3.0E-23
sp|Q9Z185|PADI1_MOUSE Protein-arginine deiminase type-1 OS=Mus musculus GN=Padi1 PE=1 SV=1 233 533 7.0E-23
sp|O88806|PADI1_RAT Protein-arginine deiminase type-1 OS=Rattus norvegicus GN=Padi1 PE=2 SV=1 233 533 1.0E-22
sp|Q9ULW8|PADI3_HUMAN Protein-arginine deiminase type-3 OS=Homo sapiens GN=PADI3 PE=1 SV=2 214 528 6.0E-22
sp|O02849|PADI3_SHEEP Protein-arginine deiminase type-3 OS=Ovis aries GN=PADI3 PE=1 SV=1 66 528 3.0E-21
sp|Q6TGC4|PADI6_HUMAN Protein-arginine deiminase type-6 OS=Homo sapiens GN=PADI6 PE=1 SV=3 232 547 2.0E-18
sp|Q8K3V4|PADI6_MOUSE Protein-arginine deiminase type-6 OS=Mus musculus GN=Padi6 PE=1 SV=2 66 529 3.0E-17
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GO

GO Term Description Terminal node
GO:0005737 cytoplasm Yes
GO:0004668 protein-arginine deiminase activity Yes
GO:0005509 calcium ion binding Yes
GO:0003824 catalytic activity No
GO:0046872 metal ion binding No
GO:0043169 cation binding No
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0005488 binding No
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines No
GO:0005575 cellular_component No
GO:0043167 ion binding No
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6504
MLLFLVSLLLPFVGAFPQSWSGTRAIHSKLHGLGDHRSWYVSSHYPKRELSPNATDNRGGNATDNLKVTIVADTN
RDGKVDITGDTDIAGKESWSEESGALFLANIGDTDGRCSAKIKNSTEEIAKCNDASDDVLRNAKYLAPVKTVPSA
QLGDTATGFITVLGQAAAPNVRVFHKKDNDWVFVTPEYSLSAQDLKTGIELGVDARDIRRPDVWDGRATLQLTVK
DGDRESKDSVALRVAPLLTHHHGQLAEEVFVSDGINDTSPERFTEQEQFVKEFSEAINQSGLKKPAHILHTGDLW
AQDFFEPGYTSMPGPNGPIALRIMIRSAQMWRGAGRVVFQSLRSDTVGAVQVNGNGEDIDSTGNLETIPPYTFNG
RSYPAGRIVMGLKDKTKPQIAPLLEAQETQGSIIEIDTSWLLVGHTDEFMQFLPFNNERGWVMMVDDPIAGLEIF
KQAEKDGQGETRVTPRPQRPTDFEGICVPKDTINALVNDTALVSIQNDCASVIQKNIDIIKRETGITDEEIIRVP
ALYSDGFFYLPCGDKAEDAPKDAPKAVPKDAPKEAPKETPKDAPRDVPKDATKDAPKEAPIKAPPNKQGLQVREI
LNTPPKTGPNILSVAGASKNQRQSTQGRYSTAKRNEKGVKARGLLRPPRKLVSNTLSVAGASGRGDQLARRQEEE
SDTVSSLLPSSINSVVLNNRQILAANPWGPVIDGVDRFKEAVTAAYAKANFTVMYIDDWSSHHIRVGDVHCASNT
ARDMGTKWWLSGP*
Coding >OphauB2|6504
ATGCTTCTTTTTCTTGTTTCTCTCTTGTTGCCGTTTGTAGGGGCTTTCCCTCAAAGCTGGTCTGGCACAAGAGCC
ATTCATTCAAAATTACACGGGCTAGGCGACCATCGAAGCTGGTATGTTTCATCTCATTATCCGAAGCGGGAATTG
AGTCCCAACGCTACCGACAACCGAGGAGGAAATGCTACCGATAACCTCAAAGTAACCATAGTCGCCGATACCAAT
CGTGACGGCAAGGTTGATATAACGGGTGACACGGATATAGCGGGCAAGGAGAGCTGGAGTGAGGAGTCTGGCGCA
CTCTTTCTAGCCAATATTGGCGATACAGACGGCCGGTGCTCGGCTAAGATTAAAAACTCGACGGAAGAGATAGCC
AAGTGCAACGACGCTTCCGACGACGTGCTGCGCAACGCAAAATACCTGGCACCCGTTAAAACTGTTCCTAGCGCA
CAGCTTGGCGATACAGCTACAGGCTTCATTACCGTGCTAGGCCAAGCAGCCGCCCCAAATGTTCGCGTCTTTCAT
AAGAAGGACAACGATTGGGTTTTCGTCACACCCGAGTACTCTCTCTCTGCTCAAGATTTAAAGACTGGTATTGAG
CTGGGCGTTGATGCTCGCGACATTCGCCGCCCTGACGTATGGGATGGCAGAGCCACGTTGCAGCTAACTGTCAAG
GACGGGGACCGGGAGAGCAAAGATTCGGTAGCACTTCGTGTTGCTCCTCTCTTGACGCACCATCATGGCCAACTT
GCCGAGGAAGTATTCGTATCAGACGGAATCAACGATACAAGCCCGGAGAGATTCACAGAACAAGAACAGTTTGTC
AAGGAGTTTTCGGAGGCGATAAATCAATCCGGCTTGAAGAAACCGGCGCACATACTCCATACTGGCGATTTATGG
GCCCAAGACTTCTTCGAACCGGGTTATACAAGTATGCCCGGCCCCAATGGCCCCATTGCCCTACGGATCATGATA
CGGTCTGCCCAAATGTGGCGCGGGGCTGGCCGTGTGGTTTTCCAGTCTCTTCGATCTGACACCGTCGGAGCTGTT
CAGGTCAACGGCAACGGTGAAGACATCGATTCTACTGGCAACTTGGAGACTATCCCACCCTATACCTTTAACGGC
AGATCGTATCCCGCGGGCCGGATTGTTATGGGATTAAAAGATAAAACCAAGCCCCAGATAGCCCCTTTGCTAGAG
GCGCAAGAAACCCAAGGCTCGATTATTGAAATCGATACTTCATGGCTTCTAGTCGGACATACGGACGAGTTTATG
CAGTTTTTGCCCTTTAATAACGAGCGAGGCTGGGTCATGATGGTTGACGATCCCATTGCGGGCCTCGAGATATTC
AAGCAAGCAGAAAAAGATGGCCAAGGTGAAACGAGGGTCACGCCTCGCCCACAACGCCCTACCGACTTTGAAGGT
ATTTGTGTACCCAAGGATACCATTAATGCTCTAGTCAACGATACGGCATTGGTATCTATCCAGAACGACTGCGCC
AGCGTGATTCAGAAGAATATTGACATCATCAAACGGGAGACGGGCATCACGGACGAGGAAATTATTCGTGTTCCG
GCGCTCTACTCTGACGGGTTTTTTTATTTACCTTGTGGGGACAAGGCCGAGGATGCCCCCAAGGATGCCCCCAAA
GCGGTCCCTAAAGACGCTCCCAAAGAGGCCCCTAAAGAGACCCCGAAAGATGCCCCCAGAGACGTTCCCAAAGAC
GCTACCAAAGACGCTCCCAAAGAAGCTCCTATAAAAGCCCCACCAAATAAACAGGGCTTGCAGGTCCGTGAGATA
CTCAACACTCCTCCGAAGACTGGTCCCAACATCCTCTCCGTCGCAGGAGCCAGCAAGAATCAGCGCCAGTCGACA
CAGGGACGGTACTCGACTGCCAAGCGAAATGAAAAAGGTGTAAAGGCCCGGGGACTACTCAGACCTCCTCGAAAA
TTGGTTTCAAATACCCTCTCCGTGGCGGGAGCCAGCGGCCGCGGCGATCAGTTGGCACGACGCCAGGAAGAAGAG
AGCGACACGGTCAGCTCGCTCTTGCCTTCTTCGATTAACAGCGTCGTTTTGAACAATAGGCAAATCCTCGCTGCC
AACCCGTGGGGGCCCGTTATAGACGGTGTAGACCGCTTCAAGGAGGCCGTAACAGCGGCCTACGCCAAAGCCAAC
TTTACCGTCATGTACATTGACGACTGGTCTTCACACCACATAAGGGTGGGCGATGTGCATTGCGCATCCAACACG
GCCCGTGATATGGGAACCAAGTGGTGGCTTTCAGGGCCTTGA
Transcript >OphauB2|6504
ATGCTTCTTTTTCTTGTTTCTCTCTTGTTGCCGTTTGTAGGGGCTTTCCCTCAAAGCTGGTCTGGCACAAGAGCC
ATTCATTCAAAATTACACGGGCTAGGCGACCATCGAAGCTGGTATGTTTCATCTCATTATCCGAAGCGGGAATTG
AGTCCCAACGCTACCGACAACCGAGGAGGAAATGCTACCGATAACCTCAAAGTAACCATAGTCGCCGATACCAAT
CGTGACGGCAAGGTTGATATAACGGGTGACACGGATATAGCGGGCAAGGAGAGCTGGAGTGAGGAGTCTGGCGCA
CTCTTTCTAGCCAATATTGGCGATACAGACGGCCGGTGCTCGGCTAAGATTAAAAACTCGACGGAAGAGATAGCC
AAGTGCAACGACGCTTCCGACGACGTGCTGCGCAACGCAAAATACCTGGCACCCGTTAAAACTGTTCCTAGCGCA
CAGCTTGGCGATACAGCTACAGGCTTCATTACCGTGCTAGGCCAAGCAGCCGCCCCAAATGTTCGCGTCTTTCAT
AAGAAGGACAACGATTGGGTTTTCGTCACACCCGAGTACTCTCTCTCTGCTCAAGATTTAAAGACTGGTATTGAG
CTGGGCGTTGATGCTCGCGACATTCGCCGCCCTGACGTATGGGATGGCAGAGCCACGTTGCAGCTAACTGTCAAG
GACGGGGACCGGGAGAGCAAAGATTCGGTAGCACTTCGTGTTGCTCCTCTCTTGACGCACCATCATGGCCAACTT
GCCGAGGAAGTATTCGTATCAGACGGAATCAACGATACAAGCCCGGAGAGATTCACAGAACAAGAACAGTTTGTC
AAGGAGTTTTCGGAGGCGATAAATCAATCCGGCTTGAAGAAACCGGCGCACATACTCCATACTGGCGATTTATGG
GCCCAAGACTTCTTCGAACCGGGTTATACAAGTATGCCCGGCCCCAATGGCCCCATTGCCCTACGGATCATGATA
CGGTCTGCCCAAATGTGGCGCGGGGCTGGCCGTGTGGTTTTCCAGTCTCTTCGATCTGACACCGTCGGAGCTGTT
CAGGTCAACGGCAACGGTGAAGACATCGATTCTACTGGCAACTTGGAGACTATCCCACCCTATACCTTTAACGGC
AGATCGTATCCCGCGGGCCGGATTGTTATGGGATTAAAAGATAAAACCAAGCCCCAGATAGCCCCTTTGCTAGAG
GCGCAAGAAACCCAAGGCTCGATTATTGAAATCGATACTTCATGGCTTCTAGTCGGACATACGGACGAGTTTATG
CAGTTTTTGCCCTTTAATAACGAGCGAGGCTGGGTCATGATGGTTGACGATCCCATTGCGGGCCTCGAGATATTC
AAGCAAGCAGAAAAAGATGGCCAAGGTGAAACGAGGGTCACGCCTCGCCCACAACGCCCTACCGACTTTGAAGGT
ATTTGTGTACCCAAGGATACCATTAATGCTCTAGTCAACGATACGGCATTGGTATCTATCCAGAACGACTGCGCC
AGCGTGATTCAGAAGAATATTGACATCATCAAACGGGAGACGGGCATCACGGACGAGGAAATTATTCGTGTTCCG
GCGCTCTACTCTGACGGGTTTTTTTATTTACCTTGTGGGGACAAGGCCGAGGATGCCCCCAAGGATGCCCCCAAA
GCGGTCCCTAAAGACGCTCCCAAAGAGGCCCCTAAAGAGACCCCGAAAGATGCCCCCAGAGACGTTCCCAAAGAC
GCTACCAAAGACGCTCCCAAAGAAGCTCCTATAAAAGCCCCACCAAATAAACAGGGCTTGCAGGTCCGTGAGATA
CTCAACACTCCTCCGAAGACTGGTCCCAACATCCTCTCCGTCGCAGGAGCCAGCAAGAATCAGCGCCAGTCGACA
CAGGGACGGTACTCGACTGCCAAGCGAAATGAAAAAGGTGTAAAGGCCCGGGGACTACTCAGACCTCCTCGAAAA
TTGGTTTCAAATACCCTCTCCGTGGCGGGAGCCAGCGGCCGCGGCGATCAGTTGGCACGACGCCAGGAAGAAGAG
AGCGACACGGTCAGCTCGCTCTTGCCTTCTTCGATTAACAGCGTCGTTTTGAACAATAGGCAAATCCTCGCTGCC
AACCCGTGGGGGCCCGTTATAGACGGTGTAGACCGCTTCAAGGAGGCCGTAACAGCGGCCTACGCCAAAGCCAAC
TTTACCGTCATGTACATTGACGACTGGTCTTCACACCACATAAGGGTGGGCGATGTGCATTGCGCATCCAACACG
GCCCGTGATATGGGAACCAAGTGGTGGCTTTCAGGGCCTTGA
Gene >OphauB2|6504
ATGCTTCTTTTTCTTGTTTCTCTCTTGTTGCCGTTTGTAGGGGCTTTCCCTCAAAGCTGGTCTGGCACAAGAGCC
ATTCATTCAAAATTACACGGGCTAGGCGACCATCGAAGCTGGTATGTTTCATCTCATTATCCGAAGCGGGAATTG
AGTCCCAACGCTACCGACAACCGAGGAGGAAATGCTACCGATAACCTCAAAGTAACCATAGTCGCCGATACCAAT
CGTGACGGCAAGGTTGATATAACGGGTGACACGGATATAGCGGGCAAGGAGAGCTGGAGTGAGGAGTCTGGCGCA
CTCTTTCTAGCCAATATTGGCGATACAGACGGCCGGTGCTCGGCTAAGATTAAAAACTCGACGGAAGAGATAGCC
AAGTGCAACGACGCTTCCGACGACGTGCTGCGCAACGCAAAATACCTGGCACCCGTTAAAACTGTTCCTAGCGCA
CAGCTTGGCGATACAGCTACAGGCTTCATTACCGTGCTAGGCCAAGCAGCCGCCCCAAATGTTCGCGTCTTTCAT
AAGAAGGACAACGATTGGGTTTTCGTCACACCCGAGTACTCTCTCTCTGCTCAAGATTTAAAGACTGGTATTGAG
CTGGGCGTTGATGCTCGCGACATTCGCCGCCCTGACGTATGGGATGGCAGAGCCACGTTGCAGCTAACTGTCAAG
GACGGGGACCGGGAGAGCAAAGATTCGGTAGCACTTCGTGTTGCTCCTCTCTTGACGCACCATCATGGCCAACTT
GCCGAGGAAGTATTCGTATCAGACGGAATCAACGATACAAGCCCGGAGAGATTCACAGAACAAGAACAGTTTGTC
AAGGAGTTTTCGGAGGCGATAAATCAATCCGGCTTGAAGAAACCGGCGCACATACTCCATACTGGCGATTTATGG
GCCCAAGACTTCTTCGAACCGGGTTATACAAGTATGCCCGGCCCCAATGGCCCCATTGCCCTACGGATCATGATA
CGGTCTGCCCAAATGTGGCGCGGGGCTGGCCGTGTGGTTTTCCAGTCTCTTCGATCTGACACCGTCGGAGCTGTT
CAGGTCAACGGCAACGGTGAAGACATCGATTCTACTGGCAACTTGGAGACTATCCCACCCTATACCTTTAACGGC
AGATCGTATCCCGCGGGCCGGATTGTTATGGGATTAAAAGATAAAACCAAGCCCCAGATAGCCCCTTTGCTAGAG
GCGCAAGAAACCCAAGGCTCGATTATTGAAATCGATACTTCATGGCTTCTAGTCGGACATACGGACGAGTTTATG
CAGTTTTTGCCCTTTAATAACGAGCGAGGCTGGGTCATGATGGTTGACGATCCCATTGCGGGCCTCGAGATATTC
AAGCAAGCAGAAAAAGATGGCCAAGGTGAAACGAGGGTCACGCCTCGCCCACAACGCCCTACCGACTTTGAAGGT
ATTTGTGTACCCAAGGATACCATTAATGCTCTAGTCAACGATACGGCATTGGTATCTATCCAGAACGACTGCGCC
AGCGTGATTCAGAAGAATATTGACATCATCAAACGGGAGACGGGCATCACGGACGAGGAAATTATTCGTGTTCCG
GCGCTCTACTCTGACGGGTTTTTTTATTTACCTTGTGGGGACAAGGCCGAGGATGCCCCCAAGGATGCCCCCAAA
GCGGTCCCTAAAGACGCTCCCAAAGAGGCCCCTAAAGAGACCCCGAAAGATGCCCCCAGAGACGTTCCCAAAGAC
GCTACCAAAGACGCTCCCAAAGAAGCTCCTATAAAAGCCCCACCAAATAAACAGGGCTTGCAGGTCCGTGAGATA
CTCAACACTCCTCCGAAGACTGGTCCCAACATCCTCTCCGTCGCAGGAGCCAGCAAGAATCAGCGCCAGTCGACA
CAGGGACGGTACTCGACTGCCAAGCGAAATGAAAAAGGTGTAAAGGCCCGGGGACTACTCAGACCTCCTCGAAAA
TTGGTTTCAAATACCCTCTCCGTGGCGGGAGCCAGCGGCCGCGGCGATCAGTTGGCACGACGCCAGGAAGAAGAG
AGCGACACGGTCAGCTCGCTCTTGCCTTCTTCGATTAACAGCGTCGTTTTGAACAATAGGCAAATCCTCGCTGCC
AACCCGTGGGGGCCCGTTATAGACGGTGTAGACCGCTTCAAGGAGGCCGTAACAGCGGCCTACGCCAAAGCCAAC
TTTACCGTCATGTACATTGACGACTGGTCTTCACACCACATAAGGGTGGGCGATGTGCATTGCGCATCCAACACG
GCCCGTGATATGGGAACCAAGTGGTGGCTTTCAGGGCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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