Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|65
Gene name
Location	Contig_1:157739..159272
Strand	-
Gene length (bp)	1533
Transcript length (bp)	1371
Coding sequence length (bp)	1371
Protein length (aa)	457

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09732	CactinC_cactus	Cactus-binding C-terminus of cactin protein	9.1E-56	319	456
PF10312	Cactin_mid	Conserved mid region of cactin	3.1E-47	49	235

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O14342\|YB3C_SCHPO	Uncharacterized protein C2F12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2F12.12c PE=4 SV=1	59	456	3.0E-52
sp\|F4I2J8\|CATIN_ARATH	Cactin OS=Arabidopsis thaliana GN=CTN PE=1 SV=1	271	456	6.0E-51
sp\|G5EG14\|CATIN_CAEEL	Cactin OS=Caenorhabditis elegans GN=cacn-1 PE=1 SV=1	293	456	6.0E-48
sp\|Q9VR99\|CATIN_DROME	Cactin OS=Drosophila melanogaster GN=cactin PE=1 SV=3	294	456	4.0E-47
sp\|B6KG46\|CATIN_TOXGO	Cactin OS=Toxoplasma gondii GN=CACTIN PE=1 SV=2	319	456	1.0E-46

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O14342\|YB3C_SCHPO	Uncharacterized protein C2F12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2F12.12c PE=4 SV=1	59	456	3.0E-52
sp\|F4I2J8\|CATIN_ARATH	Cactin OS=Arabidopsis thaliana GN=CTN PE=1 SV=1	271	456	6.0E-51
sp\|G5EG14\|CATIN_CAEEL	Cactin OS=Caenorhabditis elegans GN=cacn-1 PE=1 SV=1	293	456	6.0E-48
sp\|Q9VR99\|CATIN_DROME	Cactin OS=Drosophila melanogaster GN=cactin PE=1 SV=3	294	456	4.0E-47
sp\|B6KG46\|CATIN_TOXGO	Cactin OS=Toxoplasma gondii GN=CACTIN PE=1 SV=2	319	456	1.0E-46
sp\|Q8WUQ7\|CATIN_HUMAN	Cactin OS=Homo sapiens GN=CACTIN PE=1 SV=3	281	456	1.0E-46
sp\|F1Q8W0\|CATIN_DANRE	Cactin OS=Danio rerio GN=cactin PE=2 SV=1	281	456	3.0E-45
sp\|Q9CS00\|CATIN_MOUSE	Cactin OS=Mus musculus GN=Cactin PE=1 SV=2	278	456	4.0E-45
sp\|Q8WUQ7\|CATIN_HUMAN	Cactin OS=Homo sapiens GN=CACTIN PE=1 SV=3	58	286	5.0E-14
sp\|F1Q8W0\|CATIN_DANRE	Cactin OS=Danio rerio GN=cactin PE=2 SV=1	54	256	4.0E-12
sp\|Q9CS00\|CATIN_MOUSE	Cactin OS=Mus musculus GN=Cactin PE=1 SV=2	58	260	1.0E-11
sp\|Q9VR99\|CATIN_DROME	Cactin OS=Drosophila melanogaster GN=cactin PE=1 SV=3	54	248	1.0E-07
sp\|F4I2J8\|CATIN_ARATH	Cactin OS=Arabidopsis thaliana GN=CTN PE=1 SV=1	60	235	1.0E-06

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GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 14	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|65 MDPGRREMLAKQRPWNRKSATGPQHDAKTRVSKPSQRGAQGDSSRYLSQDQLARKFVDEEDDFVLKQSKKKADIR VREGRATPHDHLVFNLRYIDRERHLFDDQDEDYGIELKAPGSVISELDLGQLRELQAGVESFLALEKEAVARAYW SAVQVLCEDQLSRLDASNSEERRILEVVADDIDKILKAKKYEELEKLEKDIKSQLESDELIDADFWQQMLRETKA RRSKMTLQRIFETIVEEQAKAAKLRPAKGAQDSKAAAAMDVDATAEGLASGPADEDVSQATRALYDRLASQAMLE NEEIFTAEEAVPSVAKRQWTEEYTARKPRYFNRVQMGYEWNKYNQTHYDHSNPPPRVVQGYKFNIFYPDLIDNTK TPTFKIIREHGRRRGESLAAAGEADTCLIHFIAGPPYADIAFRIVDREWDFSAKRDRGYKSTFENGVLQLHFQFK KIFYRK*
Coding	>OphauB2\|65 ATGGATCCAGGCCGCCGTGAAATGCTTGCCAAGCAGCGTCCTTGGAATCGCAAAAGTGCCACGGGCCCTCAACAT GATGCCAAGACACGCGTTAGCAAGCCGTCGCAGCGCGGGGCCCAAGGCGACTCGTCACGCTATCTATCCCAAGAC CAGCTTGCGCGCAAGTTTGTCGATGAGGAGGATGACTTTGTGCTGAAGCAGTCCAAGAAGAAGGCGGATATCCGG GTCCGCGAAGGACGAGCCACACCCCATGACCATCTCGTATTTAACCTGCGCTACATTGATCGTGAGCGCCATCTT TTTGACGATCAAGACGAAGATTATGGCATTGAGCTCAAGGCGCCAGGGTCTGTAATCTCAGAACTCGACCTCGGT CAATTGCGTGAGCTGCAGGCAGGAGTCGAGTCATTTCTGGCTCTGGAAAAGGAGGCCGTCGCCAGAGCATACTGG TCGGCCGTGCAGGTTCTTTGCGAGGACCAATTGTCTAGGCTGGATGCCAGCAACTCTGAAGAACGCCGTATTCTT GAAGTTGTTGCCGACGACATTGACAAGATTTTAAAGGCAAAAAAGTATGAGGAGCTGGAGAAGCTAGAAAAGGAC ATCAAGAGCCAGCTTGAGTCGGATGAGCTGATTGATGCCGACTTTTGGCAACAGATGCTGCGTGAAACCAAGGCT CGCAGAAGCAAAATGACGCTGCAACGCATATTTGAGACCATTGTTGAGGAACAGGCAAAAGCGGCCAAATTGCGG CCAGCCAAAGGTGCACAGGATTCAAAGGCAGCGGCAGCCATGGATGTAGATGCTACTGCAGAAGGTCTGGCATCA GGCCCAGCCGACGAAGATGTGTCGCAAGCCACAAGAGCTCTCTACGACAGGCTGGCCTCGCAGGCCATGCTGGAA AACGAGGAAATCTTCACAGCCGAAGAGGCTGTGCCGAGCGTGGCAAAACGTCAGTGGACCGAAGAGTACACAGCG CGAAAGCCGCGATACTTCAACCGGGTGCAAATGGGTTACGAGTGGAACAAGTACAACCAGACGCACTATGACCAC AGCAACCCCCCGCCCAGGGTTGTCCAGGGCTACAAGTTCAACATTTTCTACCCAGATCTCATTGACAATACCAAG ACGCCGACGTTTAAAATCATTCGCGAGCATGGCCGGCGGCGAGGCGAATCGTTGGCGGCCGCTGGCGAGGCGGAC ACATGCCTCATTCACTTTATTGCAGGGCCACCATATGCTGACATTGCCTTTCGCATCGTCGATCGTGAATGGGAC TTTAGTGCCAAACGGGACCGTGGTTACAAGAGCACTTTTGAAAATGGAGTCTTGCAGCTTCATTTCCAGTTCAAA AAGATCTTTTACCGGAAATAG
Transcript	>OphauB2\|65 ATGGATCCAGGCCGCCGTGAAATGCTTGCCAAGCAGCGTCCTTGGAATCGCAAAAGTGCCACGGGCCCTCAACAT GATGCCAAGACACGCGTTAGCAAGCCGTCGCAGCGCGGGGCCCAAGGCGACTCGTCACGCTATCTATCCCAAGAC CAGCTTGCGCGCAAGTTTGTCGATGAGGAGGATGACTTTGTGCTGAAGCAGTCCAAGAAGAAGGCGGATATCCGG GTCCGCGAAGGACGAGCCACACCCCATGACCATCTCGTATTTAACCTGCGCTACATTGATCGTGAGCGCCATCTT TTTGACGATCAAGACGAAGATTATGGCATTGAGCTCAAGGCGCCAGGGTCTGTAATCTCAGAACTCGACCTCGGT CAATTGCGTGAGCTGCAGGCAGGAGTCGAGTCATTTCTGGCTCTGGAAAAGGAGGCCGTCGCCAGAGCATACTGG TCGGCCGTGCAGGTTCTTTGCGAGGACCAATTGTCTAGGCTGGATGCCAGCAACTCTGAAGAACGCCGTATTCTT GAAGTTGTTGCCGACGACATTGACAAGATTTTAAAGGCAAAAAAGTATGAGGAGCTGGAGAAGCTAGAAAAGGAC ATCAAGAGCCAGCTTGAGTCGGATGAGCTGATTGATGCCGACTTTTGGCAACAGATGCTGCGTGAAACCAAGGCT CGCAGAAGCAAAATGACGCTGCAACGCATATTTGAGACCATTGTTGAGGAACAGGCAAAAGCGGCCAAATTGCGG CCAGCCAAAGGTGCACAGGATTCAAAGGCAGCGGCAGCCATGGATGTAGATGCTACTGCAGAAGGTCTGGCATCA GGCCCAGCCGACGAAGATGTGTCGCAAGCCACAAGAGCTCTCTACGACAGGCTGGCCTCGCAGGCCATGCTGGAA AACGAGGAAATCTTCACAGCCGAAGAGGCTGTGCCGAGCGTGGCAAAACGTCAGTGGACCGAAGAGTACACAGCG CGAAAGCCGCGATACTTCAACCGGGTGCAAATGGGTTACGAGTGGAACAAGTACAACCAGACGCACTATGACCAC AGCAACCCCCCGCCCAGGGTTGTCCAGGGCTACAAGTTCAACATTTTCTACCCAGATCTCATTGACAATACCAAG ACGCCGACGTTTAAAATCATTCGCGAGCATGGCCGGCGGCGAGGCGAATCGTTGGCGGCCGCTGGCGAGGCGGAC ACATGCCTCATTCACTTTATTGCAGGGCCACCATATGCTGACATTGCCTTTCGCATCGTCGATCGTGAATGGGAC TTTAGTGCCAAACGGGACCGTGGTTACAAGAGCACTTTTGAAAATGGAGTCTTGCAGCTTCATTTCCAGTTCAAA AAGATCTTTTACCGGAAATAG
Gene	>OphauB2\|65 ATGGATCCAGGCCGCCGTGAAATGCTTGCCAAGCAGCGTCCTTGGAATCGCAAAAGTGCCACGGGCCCTCAACAT GATGCCAAGACACGCGTTAGCAAGCCGTCGCAGCGCGGGGCCCAAGGCGACTCGTCACGCTATCTATCCCAAGAC CAGCTTGCGCGCAAGTTTGTCGATGAGGAGGATGACTTTGTGCTGAAGCAGTCCAAGAAGAAGGCGGATATCCGG GTCCGCGAAGGACGAGCCACACCCCATGACCATCTCGTATTTAACCTGCGCTACATTGATCGTGAGCGCCATCTT TTTGACGATCAAGACGAAGATTATGGCATTGAGCTCAAGGCGCCAGGGTCTGTAATCTCAGAACTCGACCTCGGT CAATTGCGTGAGCTGCAGGCAGGAGTCGAGTCATTTCTGGCTCTGGAAAAGGAGGCCGTCGCCAGAGCATACTGG TCGGCCGTGCAGGTTCTTTGCGAGGACCAATTGTCTAGGCTGGATGCCAGCAACTCTGAAGAACGCCGTATTCTT GAAGTTGTTGCCGACGACATTGACAAGATTTTAAAGGCAAAAAAGTATGAGGAGCTGGAGAAGCTAGAAAAGGAC ATCAAGAGCCAGCTTGAGTCGGATGAGCTGATTGATGCCGACTTTTGGCAACAGATGCTGCGTGAAACCAAGGCT CGCAGAAGCAAAATGACGCTGCAACGCATATTTGAGACCATTGTTGAGGAACAGGCAAAAGCGGCCAAATTGCGG CCAGCCAAAGGTGCACAGGATTCAAAGGCAGCGGCAGCCATGGATGTAGATGCTACTGCAGAAGGTCTGGCATCA GGCCCAGCCGACGAAGATGTGTCGCAAGCCACAAGAGCTCTCTACGACAGGCTGGCCTCGCAGGCCATGCTGGAA AACGAGGAAATCTTCACAGCCGAAGAGGCTGTGCCGAGCGTGGCAAAACGTCAGTGGACCGAAGAGTACACAGCG CGAAAGCCGCGATACTTCAACCGGGTGCAAATGGGTTACGAGTGGAACAAGTACAACCAGACGCACTATGACCAC AGCAACCCCCCGCCCAGGGTTGTCCAGGGCTACAAGTTCAACATTTTCTACCCAGATCTCATTGACAATACCAAG ACGCCGACGTTTAAAATCATTCGCGAGCATGGCCGGCGGCGAGGCGAATCGTTGGCGGCCGCTGGCGAGGCGGAC ACATGCCTCATTCACTTTATTGCAGGGCCACCATATGCTGACATTGCCTTTCGCATCGTCGATCGTGAATGGGAC TTTAGTGCCAAACGGGACCGTGGTTACAAGAGCACTTTTGAAAATGTGAGTCGAATCCAAGGGAGAAAAGGAGCA CGACGAGGAGGACAAGTGCAAGGAGATAGACAAGAGAGATTCACGAGGGTGCTAACACGCATGTTTTTGCAGGGA GTCTTGCAGCTTCATTTCCAGTTCAAAAAGGCATGTTACATGAGCAACCGACGGGAAGAGTGAGAGACGTCGCTA ACTTTTGACCCAAAGATCTTTTACCGGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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