Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6489
Gene name
LocationContig_6:152898..155274
Strand-
Gene length (bp)2376
Transcript length (bp)2124
Coding sequence length (bp)2124
Protein length (aa) 708

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04142 Nuc_sug_transp Nucleotide-sugar transporter 4.1E-21 145 366

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O08520|S35A1_CRIGR CMP-sialic acid transporter OS=Cricetulus griseus GN=SLC35A1 PE=2 SV=1 152 373 2.0E-15
sp|P78382|S35A1_HUMAN CMP-sialic acid transporter OS=Homo sapiens GN=SLC35A1 PE=2 SV=1 152 373 4.0E-15
sp|Q6ZL17|CSTR2_ORYSJ CMP-sialic acid transporter 2 OS=Oryza sativa subsp. japonica GN=CSTLP2 PE=2 SV=1 152 373 2.0E-14
sp|B8B7Q4|CSTR2_ORYSI CMP-sialic acid transporter 2 OS=Oryza sativa subsp. indica GN=CSTLP2 PE=3 SV=1 152 373 2.0E-14
sp|Q61420|S35A1_MOUSE CMP-sialic acid transporter OS=Mus musculus GN=Slc35a1 PE=1 SV=2 152 373 3.0E-14
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|O08520|S35A1_CRIGR CMP-sialic acid transporter OS=Cricetulus griseus GN=SLC35A1 PE=2 SV=1 152 373 2.0E-15
sp|P78382|S35A1_HUMAN CMP-sialic acid transporter OS=Homo sapiens GN=SLC35A1 PE=2 SV=1 152 373 4.0E-15
sp|Q6ZL17|CSTR2_ORYSJ CMP-sialic acid transporter 2 OS=Oryza sativa subsp. japonica GN=CSTLP2 PE=2 SV=1 152 373 2.0E-14
sp|B8B7Q4|CSTR2_ORYSI CMP-sialic acid transporter 2 OS=Oryza sativa subsp. indica GN=CSTLP2 PE=3 SV=1 152 373 2.0E-14
sp|Q61420|S35A1_MOUSE CMP-sialic acid transporter OS=Mus musculus GN=Slc35a1 PE=1 SV=2 152 373 3.0E-14
sp|Q654D9|CSTR1_ORYSJ CMP-sialic acid transporter 1 OS=Oryza sativa subsp. japonica GN=CSTLP1 PE=2 SV=1 139 366 5.0E-14
sp|B8B350|CSTR1_ORYSI CMP-sialic acid transporter 1 OS=Oryza sativa subsp. indica GN=CSTLP1 PE=3 SV=1 139 366 1.0E-13
sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1 171 371 3.0E-12
sp|Q8LGE9|CSTR1_ARATH CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1 148 393 7.0E-12
sp|Q8GY97|CSTR2_ARATH CMP-sialic acid transporter 2 OS=Arabidopsis thaliana GN=At2g43240 PE=2 SV=1 158 362 2.0E-11
sp|Q9C5H6|CSTR3_ARATH CMP-sialic acid transporter 3 OS=Arabidopsis thaliana GN=UTR6 PE=2 SV=1 152 362 1.0E-10
sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=1 SV=1 152 381 9.0E-10
sp|Q6K8S7|CSTR5_ORYSJ CMP-sialic acid transporter 5 OS=Oryza sativa subsp. japonica GN=CSTLP5 PE=2 SV=1 152 362 1.0E-09
sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1 155 378 1.0E-09
sp|O77592|S35A3_CANLF UDP-N-acetylglucosamine transporter OS=Canis lupus familiaris GN=SLC35A3 PE=2 SV=1 155 378 2.0E-09
sp|Q9Y2D2|S35A3_HUMAN UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=1 SV=1 155 378 3.0E-09
sp|Q01IU9|CSTR4_ORYSI CMP-sialic acid transporter 4 OS=Oryza sativa subsp. indica GN=CSTLP4 PE=3 SV=1 152 390 5.0E-09
sp|Q8WMS0|S35A2_CANLF UDP-galactose translocator OS=Canis lupus familiaris GN=SLC35A2 PE=2 SV=2 152 373 5.0E-09
sp|Q5N855|CSTR3_ORYSJ CMP-sialic acid transporter 3 OS=Oryza sativa subsp. japonica GN=CSTLP3 PE=2 SV=1 152 368 6.0E-09
sp|B8A7Q8|CSTR3_ORYSI CMP-sialic acid transporter 3 OS=Oryza sativa subsp. indica GN=CSTLP3 PE=3 SV=1 152 368 6.0E-09
sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1 155 378 6.0E-09
sp|Q58DA6|S35A2_BOVIN UDP-galactose translocator OS=Bos taurus GN=SLC35A2 PE=2 SV=1 152 373 9.0E-09
sp|P78381|S35A2_HUMAN UDP-galactose translocator OS=Homo sapiens GN=SLC35A2 PE=1 SV=1 152 373 9.0E-09
sp|Q02334|UGTP1_CAEEL UDP-galactose translocator 1 OS=Caenorhabditis elegans GN=ugtp-1 PE=3 SV=2 152 366 1.0E-08
sp|Q8R1T4|S35A3_MOUSE UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1 155 378 2.0E-08
sp|Q7X7C4|CSTR4_ORYSJ CMP-sialic acid transporter 4 OS=Oryza sativa subsp. japonica GN=CSTLP4 PE=3 SV=2 152 390 2.0E-08
sp|A4IHW3|S35A4_XENTR Probable UDP-sugar transporter protein SLC35A4 OS=Xenopus tropicalis GN=slc35a4 PE=2 SV=1 133 366 6.0E-08
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GO

GO Term Description Terminal node
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport Yes
GO:0000139 Golgi membrane Yes
GO:0016021 integral component of membrane Yes
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity Yes
GO:0022857 transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0098588 bounding membrane of organelle No
GO:0008150 biological_process No
GO:0016020 membrane No
GO:0071702 organic substance transport No
GO:0003674 molecular_function No
GO:0031224 intrinsic component of membrane No
GO:0051179 localization No
GO:0005338 nucleotide-sugar transmembrane transporter activity No
GO:0110165 cellular anatomical entity No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:1901505 carbohydrate derivative transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0071705 nitrogen compound transport No
GO:0055085 transmembrane transport No
GO:0009987 cellular process No
GO:0015932 nucleobase-containing compound transmembrane transporter activity No
GO:1901264 carbohydrate derivative transport No
GO:0015931 nucleobase-containing compound transport No
GO:0015780 nucleotide-sugar transmembrane transport No
GO:0031090 organelle membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 146 168 22
2 262 284 22
3 294 316 22
4 323 345 22
5 349 371 22
6 394 416 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6489
MAAALGLVVIQVSIGIIMKMAQAGGSYSFSTSGSVSISEFCKLLLSAAFFRRECLKRIADGIRPRTGSVSVKATN
SGKEMNASENDDVELAEGSSPLLLEEGEGDDARRKSNDEGSSQSGWDANKKLNVHTFWEYFKGELTKEKAIGFYI
LALAYTLINNSIFLSYHLADPGTIQLVKTSGTLVTAVIMVTALKTSISNTQWAAVFIQMFGLILTQYKPGSGSAY
PSSTYAILVFQVFLSSSSSVYNQHLLKLNANSLHADNMVLYASGAAVNLVCHLIIFFATPNEPAFFQGYGDIRAI
LVILSNIFIGLAITSVYKYADAVIKCFATAAATGILLYLSPIIFGAELGSFVIVGTLIVFVSSWLYIAFPLPRTP
HRATTTPPTMSSNHHFLRYYYAVVVPLTLATVGSVVFMTVLLGRSPTQAPATNKPSATPQEPKVPSPFHDVLAMV
RWNSPYPERIPHIRKYDPFFDTVHISIPDQNASAEPAHSWTQDNYAGTFTIYHQVSRMMQMVLAEKPDIKGLMYY
HFDSWLDPFGFNSTDWNNMWISYGSPYYRCMKSPDEDSWWGWKENTPLQLAAMDANKVVDQLGIGYQLDPDEWCL
GWSDIYYIPRRFFGDYILLAEVFKRFDVFHEVAIPTMMHIIQQTEQKRSKTTSLEIVKDCWGDCCATVKDIKDVL
STRCGHRLDYLNEPVVDAYYKKLDSQAAIMRA*
Coding >OphauB2|6489
ATGGCGGCTGCGCTGGGCCTCGTGGTCATTCAGGTGAGCATCGGCATTATTATGAAGATGGCTCAGGCAGGCGGC
TCCTATTCCTTTTCCACCTCGGGCTCCGTCAGCATCTCCGAGTTTTGCAAGCTTCTCCTTTCCGCCGCCTTTTTT
CGACGCGAGTGTCTGAAGCGCATCGCCGACGGCATACGGCCTCGAACAGGCTCAGTGTCCGTAAAGGCCACGAAT
TCTGGCAAAGAGATGAACGCAAGCGAGAATGACGATGTCGAGCTTGCTGAAGGATCAAGTCCGCTTCTCCTCGAG
GAGGGGGAAGGCGACGATGCGAGGAGGAAGAGCAATGACGAGGGCTCGAGTCAGAGCGGTTGGGACGCCAACAAA
AAACTCAACGTGCACACATTTTGGGAGTACTTTAAAGGCGAATTGACAAAAGAAAAGGCGATTGGCTTCTACATT
CTCGCTTTAGCATACACCCTCATCAACAACTCGATTTTTCTAAGCTACCACTTGGCTGACCCAGGCACCATTCAA
CTGGTCAAAACTAGCGGCACACTCGTCACCGCCGTCATCATGGTCACTGCTCTCAAGACGTCAATATCCAACACT
CAATGGGCCGCCGTCTTTATCCAGATGTTTGGCTTGATTCTAACACAGTACAAGCCCGGCTCAGGCTCTGCTTAT
CCCAGCAGCACATATGCGATTCTCGTCTTTCAAGTTTTCCTTAGCTCATCTTCAAGCGTCTACAACCAGCATCTT
CTTAAACTCAATGCCAACAGCCTCCATGCCGATAATATGGTGCTATACGCCAGCGGTGCTGCTGTTAACCTGGTT
TGCCACTTGATTATTTTCTTCGCTACTCCCAACGAACCGGCCTTCTTTCAGGGCTACGGCGACATCCGTGCCATT
CTCGTCATCTTGAGCAACATTTTTATCGGGCTTGCCATTACTTCGGTCTACAAATATGCCGATGCCGTCATCAAG
TGCTTTGCCACTGCCGCCGCAACGGGTATTCTTCTTTACTTATCGCCCATCATCTTCGGGGCCGAATTGGGCAGC
TTTGTCATAGTTGGCACCTTGATCGTCTTCGTCTCGTCCTGGCTCTATATTGCCTTTCCGCTGCCGCGAACACCC
CATAGAGCGACGACGACGCCACCTACAATGAGTTCTAATCACCACTTTCTCAGATACTACTACGCCGTTGTTGTC
CCATTGACTCTGGCCACGGTTGGGTCAGTTGTCTTCATGACCGTCCTATTGGGCCGCAGCCCAACACAAGCACCA
GCAACCAACAAGCCGTCTGCTACGCCACAAGAGCCAAAGGTCCCCTCTCCCTTCCACGACGTTTTGGCCATGGTT
CGCTGGAACTCGCCATATCCGGAACGCATCCCCCATATCCGAAAATACGACCCCTTTTTCGACACGGTTCACATC
TCCATTCCAGACCAAAACGCGTCGGCAGAACCCGCGCATAGTTGGACCCAAGATAACTACGCAGGCACTTTTACA
ATATATCACCAGGTGTCTCGAATGATGCAGATGGTGCTCGCCGAGAAGCCCGATATCAAGGGCCTCATGTACTAT
CACTTTGATTCATGGCTGGACCCTTTTGGCTTCAACAGCACTGACTGGAACAACATGTGGATATCTTACGGATCA
CCTTATTACAGGTGTATGAAGTCTCCTGACGAGGATTCTTGGTGGGGATGGAAAGAGAACACGCCTCTGCAGCTG
GCTGCCATGGACGCCAACAAAGTCGTTGATCAGCTTGGCATCGGCTATCAGCTAGACCCCGACGAGTGGTGTCTT
GGCTGGAGCGACATTTACTACATCCCACGCCGCTTCTTCGGCGACTATATACTCCTTGCAGAGGTGTTTAAGCGC
TTCGACGTCTTTCACGAGGTCGCCATACCAACAATGATGCACATTATTCAGCAGACTGAACAGAAACGTTCCAAG
ACCACCTCGCTTGAAATTGTTAAGGACTGTTGGGGAGATTGCTGCGCCACCGTCAAGGACATCAAAGACGTCTTG
TCAACAAGGTGCGGTCACCGCCTGGATTATCTGAATGAGCCAGTCGTCGATGCGTACTATAAGAAGCTTGATTCC
CAGGCCGCCATAATGCGTGCCTAG
Transcript >OphauB2|6489
ATGGCGGCTGCGCTGGGCCTCGTGGTCATTCAGGTGAGCATCGGCATTATTATGAAGATGGCTCAGGCAGGCGGC
TCCTATTCCTTTTCCACCTCGGGCTCCGTCAGCATCTCCGAGTTTTGCAAGCTTCTCCTTTCCGCCGCCTTTTTT
CGACGCGAGTGTCTGAAGCGCATCGCCGACGGCATACGGCCTCGAACAGGCTCAGTGTCCGTAAAGGCCACGAAT
TCTGGCAAAGAGATGAACGCAAGCGAGAATGACGATGTCGAGCTTGCTGAAGGATCAAGTCCGCTTCTCCTCGAG
GAGGGGGAAGGCGACGATGCGAGGAGGAAGAGCAATGACGAGGGCTCGAGTCAGAGCGGTTGGGACGCCAACAAA
AAACTCAACGTGCACACATTTTGGGAGTACTTTAAAGGCGAATTGACAAAAGAAAAGGCGATTGGCTTCTACATT
CTCGCTTTAGCATACACCCTCATCAACAACTCGATTTTTCTAAGCTACCACTTGGCTGACCCAGGCACCATTCAA
CTGGTCAAAACTAGCGGCACACTCGTCACCGCCGTCATCATGGTCACTGCTCTCAAGACGTCAATATCCAACACT
CAATGGGCCGCCGTCTTTATCCAGATGTTTGGCTTGATTCTAACACAGTACAAGCCCGGCTCAGGCTCTGCTTAT
CCCAGCAGCACATATGCGATTCTCGTCTTTCAAGTTTTCCTTAGCTCATCTTCAAGCGTCTACAACCAGCATCTT
CTTAAACTCAATGCCAACAGCCTCCATGCCGATAATATGGTGCTATACGCCAGCGGTGCTGCTGTTAACCTGGTT
TGCCACTTGATTATTTTCTTCGCTACTCCCAACGAACCGGCCTTCTTTCAGGGCTACGGCGACATCCGTGCCATT
CTCGTCATCTTGAGCAACATTTTTATCGGGCTTGCCATTACTTCGGTCTACAAATATGCCGATGCCGTCATCAAG
TGCTTTGCCACTGCCGCCGCAACGGGTATTCTTCTTTACTTATCGCCCATCATCTTCGGGGCCGAATTGGGCAGC
TTTGTCATAGTTGGCACCTTGATCGTCTTCGTCTCGTCCTGGCTCTATATTGCCTTTCCGCTGCCGCGAACACCC
CATAGAGCGACGACGACGCCACCTACAATGAGTTCTAATCACCACTTTCTCAGATACTACTACGCCGTTGTTGTC
CCATTGACTCTGGCCACGGTTGGGTCAGTTGTCTTCATGACCGTCCTATTGGGCCGCAGCCCAACACAAGCACCA
GCAACCAACAAGCCGTCTGCTACGCCACAAGAGCCAAAGGTCCCCTCTCCCTTCCACGACGTTTTGGCCATGGTT
CGCTGGAACTCGCCATATCCGGAACGCATCCCCCATATCCGAAAATACGACCCCTTTTTCGACACGGTTCACATC
TCCATTCCAGACCAAAACGCGTCGGCAGAACCCGCGCATAGTTGGACCCAAGATAACTACGCAGGCACTTTTACA
ATATATCACCAGGTGTCTCGAATGATGCAGATGGTGCTCGCCGAGAAGCCCGATATCAAGGGCCTCATGTACTAT
CACTTTGATTCATGGCTGGACCCTTTTGGCTTCAACAGCACTGACTGGAACAACATGTGGATATCTTACGGATCA
CCTTATTACAGGTGTATGAAGTCTCCTGACGAGGATTCTTGGTGGGGATGGAAAGAGAACACGCCTCTGCAGCTG
GCTGCCATGGACGCCAACAAAGTCGTTGATCAGCTTGGCATCGGCTATCAGCTAGACCCCGACGAGTGGTGTCTT
GGCTGGAGCGACATTTACTACATCCCACGCCGCTTCTTCGGCGACTATATACTCCTTGCAGAGGTGTTTAAGCGC
TTCGACGTCTTTCACGAGGTCGCCATACCAACAATGATGCACATTATTCAGCAGACTGAACAGAAACGTTCCAAG
ACCACCTCGCTTGAAATTGTTAAGGACTGTTGGGGAGATTGCTGCGCCACCGTCAAGGACATCAAAGACGTCTTG
TCAACAAGGTGCGGTCACCGCCTGGATTATCTGAATGAGCCAGTCGTCGATGCGTACTATAAGAAGCTTGATTCC
CAGGCCGCCATAATGCGTGCCTAG
Gene >OphauB2|6489
ATGGCGGCTGCGCTGGGCCTCGTGGTCATTCAGGTGAGCATCGGCATTATTATGAAGATGGCTCAGGCAGGCGGC
TCCTATTCCTTTTCCACCTCGGGCTCCGTCAGCATCTCCGAGTTTTGCAAGCTTCTCCTTTCCGCCGCCTTTTTT
CGACGCGAGTGTCTGAAGCGCATCGCCGACGGCATACGGCCTCGAACAGGCTCAGTGTCCGTAAAGGCCACGAAT
TCTGGCAAAGAGATGAACGCAAGCGAGAATGACGATGTCGAGCTTGCTGAAGGATCAAGTCCGCTTCTCCTCGAG
GAGGGGGAAGGCGACGATGCGAGGAGGAAGAGCAATGACGAGGGCTCGAGTCAGAGCGGTTGGGACGCCAACAAA
AAACTCAACGTGCACACATTTTGGGAGTACTTTAAAGGCGAATTGACAAAAGAAAAGGCGATTGGCTTCTACATT
CTCGCTTTAGCATACACCCTCATCAACAACTCGGTAAGTCTTGTCTCTACTCTTGTATGATGATCAACAAAACAC
ATGGTGCCTGGCACTCGTTTAACACGTCGCCCGTGCCGACTGCCTCATGATGGAAAAATTTGCGAATGCTAATCC
CTCTTTGAAATACAGATTTTTCTAAGCTACCACTTGGCTGACCCAGGCACCATTCAACTGGTCAAAACTAGCGGC
ACACTCGTCACCGCCGTCATCATGGTCACTGCTCTCAAGACGTCAATATCCAACACTCAATGGGCCGCCGTCTTT
ATCCAGGTTCGCCTCGCGCTATATTGACATGACGCGCAGACCGCAAAGCTGACTCCTCCTGCAGATGTTTGGCTT
GATTCTAACACAGTACAAGCCCGGCTCAGGCTCTGCTTATCCCAGCAGCACATATGCGATTCTCGTCTTTCAAGT
TTTCCTTAGCTCATCTTCAAGCGTCTACAACCAGCATCTTCTTAAACTCAATGCCAACAGCCTCCATGCCGATAA
TATGGTGCTATACGCCAGCGGTGCTGCTGTTAACCTGGTTTGCCACTTGATTATTTTCTTCGCTACTCCCAACGA
ACCGGCCTTCTTTCAGGGCTACGGCGACATCCGTGCCATTCTCGTCATCTTGAGCAACATTTTTATCGGGCTTGC
CATTACTTCGGTCTACAAATGTATGAAAGATGCTATCAGTTGACACCACGTAGCGTTGAAGAGTTACTAATGACT
CTTGCAGATGCCGATGCCGTCATCAAGTGCTTTGCCACTGCCGCCGCAACGGGTATTCTTCTTTACTTATCGCCC
ATCATCTTCGGGGCCGAATTGGGCAGCTTTGTCATAGTTGGCACCTTGATCGTCTTCGTCTCGTCCTGGCTCTAT
ATTGCCTTTCCGCTGCCGCGAACACCCCATAGAGCGACGACGACGCCACCTACAATGAGTTCTAATCACCACTTT
CTCAGATACTACTACGCCGTTGTTGTCCCATTGACTCTGGCCACGGTTGGGTCAGTTGTCTTCATGACCGTCCTA
TTGGGCCGCAGCCCAACACAAGCACCAGCAACCAACAAGCCGTCTGCTACGCCACAAGAGCCAAAGGTCCCCTCT
CCCTTCCACGACGTTTTGGCCATGGTTCGCTGGAACTCGCCATATCCGGAACGCATCCCCCATATCCGAAAATAC
GACCCCTTTTTCGACACGGTTCACATCTCCATTCCAGACCAAAACGCGTCGGCAGAACCCGCGCATAGTTGGACC
CAAGATAACTACGCAGGCACTTTTACAATATATCACCAGGTGTCTCGAATGATGCAGATGGTGCTCGCCGAGAAG
CCCGATATCAAGGGCCTCATGTACTATCACTTTGATTCATGGCTGGACCCTTTTGGCTTCAACAGCACTGACTGG
AACAACATGTGGATATCTTACGGATCACCTTATTACAGGTGTATGAAGTCTCCTGACGAGGATTCTTGGTGGGGA
TGGAAAGAGAACACGCCTCTGCAGCTGGCTGCCATGGACGCCAACAAAGTCGTTGATCAGCTTGGCATCGGCTAT
CAGCTAGACCCCGACGAGTGGTGTCTTGGCTGGAGCGACATTTACTACATCCCACGCCGCTTCTTCGGCGACTAT
ATACTCCTTGCAGAGGTGTTTAAGCGCTTCGACGTCTTTCACGAGGTCGCCATACCAACAATGATGCACATTATT
CAGCAGACTGAACAGAAACGTTCCAAGACCACCTCGCTTGAAATTGTTAAGGACTGTTGGGGAGATTGCTGCGCC
ACCGTCAAGGACATCAAAGACGTCTTGTCAACAAGGTGCGGTCACCGCCTGGATTATCTGAATGAGCCAGTCGTC
GATGCGTACTATAAGAAGCTTGATTCCCAGGCCGCCATAATGCGTGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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