© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6458 |
| Gene name | |
| Location | Contig_6:60434..62022 |
| Strand | - |
| Gene length (bp) | 1588 |
| Transcript length (bp) | 1464 |
| Coding sequence length (bp) | 1464 |
| Protein length (aa) | 488 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 2.3E-22 | 44 | 189 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 7 | 479 | 4.0E-52 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 7 | 479 | 1.0E-34 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 19 | 220 | 4.0E-18 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 18 | 245 | 7.0E-17 |
| sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 23 | 211 | 8.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 7 | 479 | 4.0E-52 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 7 | 479 | 1.0E-34 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 19 | 220 | 4.0E-18 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 18 | 245 | 7.0E-17 |
| sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 23 | 211 | 8.0E-09 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 25 | 484 | 3.0E-08 |
| sp|Q9FUJ1|CKX7_ARATH | Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 | 41 | 260 | 4.0E-08 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 41 | 213 | 7.0E-08 |
| sp|Q9FZC4|FOX1_ARATH | Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 | 47 | 211 | 1.0E-07 |
| sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 28 | 211 | 2.0E-07 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 44 | 240 | 2.0E-07 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 44 | 213 | 3.0E-07 |
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 43 | 211 | 6.0E-07 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 75 | 229 | 1.0E-06 |
| sp|Q796P5|YITY_BACSU | Uncharacterized FAD-linked oxidoreductase YitY OS=Bacillus subtilis (strain 168) GN=yitY PE=3 SV=2 | 75 | 217 | 2.0E-06 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 12 | 213 | 3.0E-06 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 28 | 211 | 6.0E-06 |
| sp|Q9FZC8|FOX5_ARATH | Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 | 47 | 211 | 7.0E-06 |
| sp|Q67YU0|CKX5_ARATH | Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 | 16 | 260 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| AA7 | 2.4E-56 | 39 | 471 |
| Orthofinder run ID | 4 |
| Orthogroup | 23 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6458 MKLATSCCALLSARLGDWTVFPDSAAYNASVSSYFSSQAAAARPACIVLAQNAEHVATAVRILASAPPAQEDDKQ NNCRFAIRSGGHAVDARASNIEGGVTLDLRGLSKIDLDLDRSTALVGVGNTWDAVYTKLDALNLGVNGGRVAGVG VGGLTLGGGISYFGTRYGWTADTVSNFEVVLANGSIVNANRFRNANLFWALKGGGNNFGVVTRIDLDTFQQGSFW GGLLTHPSNVSAEAIHEFVKMNSADSYDPYAALILSWGYTPTFGSAILSNIEYTKDTTSTPAVFAGFVNLPRYSG NTSISTSAKRSLEIAQVQQNHYRQIWVTQTFVSTQAALQATFTRFNQSIASVSSIPDIVWSYTLEPLPPALYARP GADNALGLEDREQALVIALFSASWKNPADDAKAQKASRDIVAAIEQDLKRLNALDPYVYMNYAATWQDPIASYGQ VNVKRLREVAASVDPHGVFARQVPGGFKIPRQAHHGA* |
| Coding | >OphauB2|6458 ATGAAGCTAGCTACATCCTGTTGCGCGCTCCTGTCCGCTCGTCTGGGAGATTGGACCGTTTTCCCCGACAGCGCG GCCTACAACGCATCCGTCTCGTCCTACTTTTCCAGCCAAGCAGCCGCAGCTCGGCCTGCCTGTATAGTCTTGGCG CAAAACGCAGAGCATGTGGCCACGGCAGTGCGCATCTTGGCTTCGGCGCCGCCCGCACAAGAAGACGACAAGCAA AACAACTGTCGCTTTGCCATTAGGTCTGGAGGCCATGCAGTTGATGCCAGGGCTTCGAATATCGAGGGCGGAGTG ACGCTCGACCTGCGCGGCCTGTCTAAAATTGACCTCGACCTGGATAGATCGACTGCTCTGGTGGGCGTGGGAAAT ACATGGGACGCCGTCTATACCAAGCTCGACGCGCTGAATCTCGGCGTCAATGGCGGGCGTGTTGCAGGCGTGGGC GTGGGCGGCCTGACGCTCGGAGGAGGCATTTCCTACTTTGGCACTCGCTACGGCTGGACGGCGGACACGGTTTCC AACTTTGAAGTGGTGCTGGCAAACGGCAGCATCGTGAATGCCAACCGGTTCCGCAATGCTAATCTTTTCTGGGCG CTAAAGGGCGGCGGCAACAATTTTGGCGTCGTGACGAGAATCGATCTCGACACGTTTCAACAGGGCTCGTTTTGG GGCGGGCTGCTCACGCATCCGAGTAATGTGTCGGCAGAGGCAATCCACGAGTTTGTGAAGATGAATTCTGCCGAC TCGTATGACCCATATGCGGCCCTGATACTCTCATGGGGGTATACGCCAACCTTTGGATCGGCTATTCTGAGCAAC ATTGAATACACAAAGGACACAACGTCAACACCAGCCGTCTTTGCCGGCTTTGTCAATCTGCCGAGATATAGCGGA AATACTAGCATTTCCACCTCTGCCAAGAGATCTCTCGAGATTGCACAGGTGCAGCAGAATCACTACCGCCAGATT TGGGTCACCCAAACCTTTGTCTCAACCCAAGCAGCCCTCCAGGCAACCTTTACCCGCTTCAACCAAAGCATCGCC AGCGTCAGCTCCATCCCCGACATTGTCTGGTCATATACGCTCGAGCCACTCCCCCCAGCCCTCTACGCACGCCCC GGCGCCGACAACGCCCTCGGCCTCGAGGACCGCGAGCAAGCCCTCGTCATTGCTCTCTTTTCCGCCAGCTGGAAG AACCCAGCCGACGACGCCAAGGCGCAAAAGGCTTCGCGCGACATTGTTGCAGCCATTGAGCAAGACTTGAAGCGC CTCAATGCTCTGGATCCCTACGTCTACATGAATTACGCTGCAACGTGGCAGGATCCCATTGCGAGCTATGGCCAG GTTAATGTCAAGCGGTTGCGAGAGGTTGCAGCCAGTGTTGATCCTCATGGCGTCTTTGCGCGCCAGGTACCAGGT GGCTTCAAGATTCCTCGGCAGGCCCATCATGGTGCTTGA |
| Transcript | >OphauB2|6458 ATGAAGCTAGCTACATCCTGTTGCGCGCTCCTGTCCGCTCGTCTGGGAGATTGGACCGTTTTCCCCGACAGCGCG GCCTACAACGCATCCGTCTCGTCCTACTTTTCCAGCCAAGCAGCCGCAGCTCGGCCTGCCTGTATAGTCTTGGCG CAAAACGCAGAGCATGTGGCCACGGCAGTGCGCATCTTGGCTTCGGCGCCGCCCGCACAAGAAGACGACAAGCAA AACAACTGTCGCTTTGCCATTAGGTCTGGAGGCCATGCAGTTGATGCCAGGGCTTCGAATATCGAGGGCGGAGTG ACGCTCGACCTGCGCGGCCTGTCTAAAATTGACCTCGACCTGGATAGATCGACTGCTCTGGTGGGCGTGGGAAAT ACATGGGACGCCGTCTATACCAAGCTCGACGCGCTGAATCTCGGCGTCAATGGCGGGCGTGTTGCAGGCGTGGGC GTGGGCGGCCTGACGCTCGGAGGAGGCATTTCCTACTTTGGCACTCGCTACGGCTGGACGGCGGACACGGTTTCC AACTTTGAAGTGGTGCTGGCAAACGGCAGCATCGTGAATGCCAACCGGTTCCGCAATGCTAATCTTTTCTGGGCG CTAAAGGGCGGCGGCAACAATTTTGGCGTCGTGACGAGAATCGATCTCGACACGTTTCAACAGGGCTCGTTTTGG GGCGGGCTGCTCACGCATCCGAGTAATGTGTCGGCAGAGGCAATCCACGAGTTTGTGAAGATGAATTCTGCCGAC TCGTATGACCCATATGCGGCCCTGATACTCTCATGGGGGTATACGCCAACCTTTGGATCGGCTATTCTGAGCAAC ATTGAATACACAAAGGACACAACGTCAACACCAGCCGTCTTTGCCGGCTTTGTCAATCTGCCGAGATATAGCGGA AATACTAGCATTTCCACCTCTGCCAAGAGATCTCTCGAGATTGCACAGGTGCAGCAGAATCACTACCGCCAGATT TGGGTCACCCAAACCTTTGTCTCAACCCAAGCAGCCCTCCAGGCAACCTTTACCCGCTTCAACCAAAGCATCGCC AGCGTCAGCTCCATCCCCGACATTGTCTGGTCATATACGCTCGAGCCACTCCCCCCAGCCCTCTACGCACGCCCC GGCGCCGACAACGCCCTCGGCCTCGAGGACCGCGAGCAAGCCCTCGTCATTGCTCTCTTTTCCGCCAGCTGGAAG AACCCAGCCGACGACGCCAAGGCGCAAAAGGCTTCGCGCGACATTGTTGCAGCCATTGAGCAAGACTTGAAGCGC CTCAATGCTCTGGATCCCTACGTCTACATGAATTACGCTGCAACGTGGCAGGATCCCATTGCGAGCTATGGCCAG GTTAATGTCAAGCGGTTGCGAGAGGTTGCAGCCAGTGTTGATCCTCATGGCGTCTTTGCGCGCCAGGTACCAGGT GGCTTCAAGATTCCTCGGCAGGCCCATCATGGTGCTTGA |
| Gene | >OphauB2|6458 ATGAAGCTAGCTACATCCTGTGTTTGTAAAAGACCTCGTTTTGTGCGACGGGAGCTAGACCTCTAACTTGAGCCC TCTTAGTGCGCGCTCCTGTCCGCTCGTCTGGGAGATTGGACCGTTTTCCCCGACAGCGCGGCCTACAACGCATCC GTCTCGTCCTACTTTTCCAGCCAAGCAGCCGCAGCTCGGCCTGCCTGTATAGTCTTGGCGCAAAACGCAGAGCAT GTGGCCACGGCAGTGCGCATCTTGGCTTCGGCGCCGCCCGCACAAGAAGACGACAAGCAAAACAACTGTCGCTTT GCCATTAGGTCTGGAGGCCATGCAGTTGATGCCAGGGCTTCGAATATCGAGGGCGGAGTGACGCTCGACCTGCGC GGCCTGTCTAAAATTGACCTCGACCTGGATAGATCGACTGCTCTGGTGGGCGTGGGAAATACATGGGACGCCGTC TATACCAAGCTCGACGCGCTGAATCTCGGCGTCAATGGCGGGCGTGTTGCAGGCGTGGGCGTGGGCGGCCTGACG CTCGGAGGAGGCATTTCCTACTTTGGCACTCGCTACGGCTGGACGGCGGACACGGTTTCCAACTTTGAAGTGGTG CTGGCAAACGGCAGCATCGTGAATGCCAACCGGTTCCGCAATGCTAATCTTTTCTGGGCGCTAAAGGGCGGCGGC AACAATTTTGGCGTCGTGACGAGAATCGATCTCGACACGTTTCAACAGGGCTCGTTTTGGGGCGGGCTGCTCACG CATCCGAGTAATGTGTCGGCAGAGGCAATCCACGAGTTTGTGAAGATGAATTCTGCCGACTCGTATGACCCATAT GCGGCCCTGATACTCTCATGGGGGTATACGCCAACCTTTGGATCGGCTATTCTGAGCAACATTGAATACACAAAG GACACAACGTCAACACCAGCCGTCTTTGCCGGCTTTGTCAATCTGCCGAGATATAGCGGAAATACTAGCATTTCC ACCTCTGCCAAGAGATCTCTCGAGATTGCACAGGTGCAGCAGAATCACTACCGGTAGGTTGGACATTTAGCCCTA CCCTGCCCATTGCTCCACTGACTTGCCTCGCTTCATAAACAGCCAGATTTGGGTCACCCAAACCTTTGTCTCAAC CCAAGCAGCCCTCCAGGCAACCTTTACCCGCTTCAACCAAAGCATCGCCAGCGTCAGCTCCATCCCCGACATTGT CTGGTCATATACGCTCGAGCCACTCCCCCCAGCCCTCTACGCACGCCCCGGCGCCGACAACGCCCTCGGCCTCGA GGACCGCGAGCAAGCCCTCGTCATTGCTCTCTTTTCCGCCAGCTGGAAGAACCCAGCCGACGACGCCAAGGCGCA AAAGGCTTCGCGCGACATTGTTGCAGCCATTGAGCAAGACTTGAAGCGCCTCAATGCTCTGGATCCCTACGTCTA CATGAATTACGCTGCAACGTGGCAGGATCCCATTGCGAGCTATGGCCAGGTTAATGTCAAGCGGTTGCGAGAGGT TGCAGCCAGTGTTGATCCTCATGGCGTCTTTGCGCGCCAGGTACCAGGTGGCTTCAAGATTCCTCGGCAGGCCCA TCATGGTGCTTGA |