Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6446
Gene name
LocationContig_6:35132..35657
Strand-
Gene length (bp)525
Transcript length (bp)525
Coding sequence length (bp)525
Protein length (aa) 175

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.1E-11 74 171

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 31 170 3.0E-20
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 30 169 3.0E-16
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 36 168 2.0E-14
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 76 169 5.0E-11
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 58 169 6.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 31 170 3.0E-20
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 30 169 3.0E-16
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 36 168 2.0E-14
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 76 169 5.0E-11
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 58 169 6.0E-10
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 15 170 7.0E-10
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 53 169 2.0E-08
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 53 170 3.0E-08
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 37 170 7.0E-08
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 25 168 4.0E-07
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 62 169 9.0E-07
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 82 168 2.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0009987 cellular process No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

Domain # Start End Length
1 106 125 19
2 135 154 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6446
MAQLADDDIRTTTTTQLEQKHPPPDSRLRLVSHRDLDDTTLFFNRHKDNVAPLDPAGERRLLRRNFWFLLSQTWW
IAFLIHLDKSTLAQASTMGIFQDVQMTKDQFNLLYVVFYAGYLLALWPGAALAQRIGHKHFITASLLLWALLLGL
HPLVRTGRQMMALRFLLGMVCRLS*
Coding >OphauB2|6446
ATGGCGCAGCTCGCAGACGACGATATCCGCACCACCACCACCACCCAACTCGAGCAAAAACACCCTCCCCCCGAC
TCCCGCCTCCGCCTCGTCTCCCACCGCGACCTCGACGACACAACCCTCTTCTTCAACCGCCACAAGGACAATGTC
GCGCCCCTCGACCCCGCCGGCGAGCGCCGCCTGCTCCGCCGCAACTTTTGGTTCCTCCTCTCGCAGACGTGGTGG
ATTGCCTTTCTCATCCACCTCGACAAGTCGACCCTTGCTCAGGCCAGCACAATGGGCATTTTCCAAGACGTGCAA
ATGACAAAGGACCAGTTCAACTTGTTGTACGTCGTTTTTTACGCCGGCTATCTCTTGGCGCTGTGGCCGGGCGCC
GCGCTCGCCCAGAGAATTGGCCATAAGCACTTTATTACCGCTTCGCTGCTGCTCTGGGCCTTGTTGTTGGGGCTG
CATCCTCTTGTGCGGACGGGGCGCCAGATGATGGCCCTTCGCTTTTTACTCGGCATGGTTTGTCGTCTCTCTTAA
Transcript >OphauB2|6446
ATGGCGCAGCTCGCAGACGACGATATCCGCACCACCACCACCACCCAACTCGAGCAAAAACACCCTCCCCCCGAC
TCCCGCCTCCGCCTCGTCTCCCACCGCGACCTCGACGACACAACCCTCTTCTTCAACCGCCACAAGGACAATGTC
GCGCCCCTCGACCCCGCCGGCGAGCGCCGCCTGCTCCGCCGCAACTTTTGGTTCCTCCTCTCGCAGACGTGGTGG
ATTGCCTTTCTCATCCACCTCGACAAGTCGACCCTTGCTCAGGCCAGCACAATGGGCATTTTCCAAGACGTGCAA
ATGACAAAGGACCAGTTCAACTTGTTGTACGTCGTTTTTTACGCCGGCTATCTCTTGGCGCTGTGGCCGGGCGCC
GCGCTCGCCCAGAGAATTGGCCATAAGCACTTTATTACCGCTTCGCTGCTGCTCTGGGCCTTGTTGTTGGGGCTG
CATCCTCTTGTGCGGACGGGGCGCCAGATGATGGCCCTTCGCTTTTTACTCGGCATGGTTTGTCGTCTCTCTTAA
Gene >OphauB2|6446
ATGGCGCAGCTCGCAGACGACGATATCCGCACCACCACCACCACCCAACTCGAGCAAAAACACCCTCCCCCCGAC
TCCCGCCTCCGCCTCGTCTCCCACCGCGACCTCGACGACACAACCCTCTTCTTCAACCGCCACAAGGACAATGTC
GCGCCCCTCGACCCCGCCGGCGAGCGCCGCCTGCTCCGCCGCAACTTTTGGTTCCTCCTCTCGCAGACGTGGTGG
ATTGCCTTTCTCATCCACCTCGACAAGTCGACCCTTGCTCAGGCCAGCACAATGGGCATTTTCCAAGACGTGCAA
ATGACAAAGGACCAGTTCAACTTGTTGTACGTCGTTTTTTACGCCGGCTATCTCTTGGCGCTGTGGCCGGGCGCC
GCGCTCGCCCAGAGAATTGGCCATAAGCACTTTATTACCGCTTCGCTGCTGCTCTGGGCCTTGTTGTTGGGGCTG
CATCCTCTTGTGCGGACGGGGCGCCAGATGATGGCCCTTCGCTTTTTACTCGGCATGGTTTGTCGTCTCTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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