Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6445
Gene name
LocationContig_6:34528..34837
Strand-
Gene length (bp)309
Transcript length (bp)309
Coding sequence length (bp)309
Protein length (aa) 103

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 22 100 5.0E-10
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 6 95 1.0E-09
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 19 94 3.0E-08
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 19 95 8.0E-07
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 22 95 1.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.5

Transmembrane Domains

Domain # Start End Length
1 24 46 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6445
MVAYKLIQDDAHGTLVGGLKSWKWLHIICVVVTFFVAAFLMLLLPNSPVDAKWLSVEQKVHTIALIRVTHAGISN
STFKWPQVKECFSDVKSWLFMCVAFVS*
Coding >OphauB2|6445
ATGGTGGCCTACAAGCTCATCCAAGACGACGCCCATGGCACCCTCGTTGGCGGCCTCAAGTCGTGGAAGTGGCTG
CACATCATCTGCGTCGTCGTCACTTTTTTCGTCGCCGCCTTTCTCATGCTGCTGCTGCCAAACTCGCCCGTCGAT
GCAAAGTGGCTCTCGGTTGAGCAAAAAGTGCACACCATTGCCCTGATTCGCGTCACGCATGCTGGAATCTCCAAT
TCCACCTTTAAGTGGCCCCAGGTCAAGGAGTGTTTTTCTGATGTCAAGAGCTGGCTCTTTATGTGCGTTGCCTTT
GTCTCTTGA
Transcript >OphauB2|6445
ATGGTGGCCTACAAGCTCATCCAAGACGACGCCCATGGCACCCTCGTTGGCGGCCTCAAGTCGTGGAAGTGGCTG
CACATCATCTGCGTCGTCGTCACTTTTTTCGTCGCCGCCTTTCTCATGCTGCTGCTGCCAAACTCGCCCGTCGAT
GCAAAGTGGCTCTCGGTTGAGCAAAAAGTGCACACCATTGCCCTGATTCGCGTCACGCATGCTGGAATCTCCAAT
TCCACCTTTAAGTGGCCCCAGGTCAAGGAGTGTTTTTCTGATGTCAAGAGCTGGCTCTTTATGTGCGTTGCCTTT
GTCTCTTGA
Gene >OphauB2|6445
ATGGTGGCCTACAAGCTCATCCAAGACGACGCCCATGGCACCCTCGTTGGCGGCCTCAAGTCGTGGAAGTGGCTG
CACATCATCTGCGTCGTCGTCACTTTTTTCGTCGCCGCCTTTCTCATGCTGCTGCTGCCAAACTCGCCCGTCGAT
GCAAAGTGGCTCTCGGTTGAGCAAAAAGTGCACACCATTGCCCTGATTCGCGTCACGCATGCTGGAATCTCCAAT
TCCACCTTTAAGTGGCCCCAGGTCAAGGAGTGTTTTTCTGATGTCAAGAGCTGGCTCTTTATGTGCGTTGCCTTT
GTCTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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