Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6400
Gene name
LocationContig_59:44888..45389
Strand+
Gene length (bp)501
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 3.3E-10 26 90

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 5 24 19
2 113 135 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6400
MKSLVLAISLFALAAGATLDIAALRQQLPVCSFSCIVSSVQGSGCAVTDLSCLCARVEPLLAVVAPCLVKAGCAL
QNVTETVQVLLSVCQREVPDSVHAGSSMDNIKSIAAMVAVQWLGWALILAATTITVLPAVIPQY*
Coding >OphauB2|6400
ATGAAGTCTCTAGTGCTCGCCATATCGCTCTTTGCCCTCGCCGCCGGCGCAACGCTAGACATTGCGGCGCTGCGC
CAACAGCTGCCGGTATGTTCGTTTTCCTGCATCGTATCGAGTGTACAAGGCAGCGGGTGCGCAGTCACGGACTTG
TCCTGTCTGTGTGCGCGAGTCGAGCCGCTTCTGGCCGTTGTAGCACCGTGTCTGGTCAAGGCAGGCTGTGCGCTG
CAGAACGTCACGGAGACAGTTCAAGTTTTGTTGAGTGTATGCCAGCGAGAGGTACCAGATTCGGTTCATGCCGGC
TCGTCGATGGACAATATAAAGTCAATAGCGGCAATGGTTGCGGTGCAATGGCTGGGTTGGGCTCTAATTCTTGCG
GCTACAACCATTACTGTCTTGCCAGCAGTGATCCCTCAGTATTGA
Transcript >OphauB2|6400
ATGAAGTCTCTAGTGCTCGCCATATCGCTCTTTGCCCTCGCCGCCGGCGCAACGCTAGACATTGCGGCGCTGCGC
CAACAGCTGCCGGTATGTTCGTTTTCCTGCATCGTATCGAGTGTACAAGGCAGCGGGTGCGCAGTCACGGACTTG
TCCTGTCTGTGTGCGCGAGTCGAGCCGCTTCTGGCCGTTGTAGCACCGTGTCTGGTCAAGGCAGGCTGTGCGCTG
CAGAACGTCACGGAGACAGTTCAAGTTTTGTTGAGTGTATGCCAGCGAGAGGTACCAGATTCGGTTCATGCCGGC
TCGTCGATGGACAATATAAAGTCAATAGCGGCAATGGTTGCGGTGCAATGGCTGGGTTGGGCTCTAATTCTTGCG
GCTACAACCATTACTGTCTTGCCAGCAGTGATCCCTCAGTATTGA
Gene >OphauB2|6400
ATGAAGTCTCTAGTGCTCGCCATATCGCTCTTTGCCCTCGCCGCCGGCGCAACGCTAGACATTGCGGCGCTGCGC
CAACAGCTGCCGGTATGTTCGTTTTCCTGCATCGTATCGAGTGTACAAGGCAGCGGGTGCGCAGTCACGGACTTG
TCCTGTCTGTGTGCGCGAGTCGAGCCGCTTCTGGCCGTTGTAGCACCGTGTCTGGTCAAGGCAGGCTGTGCGCTG
CAGAACGTCACGGGTAAGTTGCTAGCAGGAGAACAGAATACGTCGGGGTACATCTGTTGGCTCTGTCTAGAGCAA
AATCTGACAATATGAACAGAGACAGTTCAAGTTTTGTTGAGTGTATGCCAGCGAGAGGTACCAGATTCGGTTCAT
GCCGGCTCGTCGATGGACAATATAAAGTCAATAGCGGCAATGGTTGCGGTGCAATGGCTGGGTTGGGCTCTAATT
CTTGCGGCTACAACCATTACTGTCTTGCCAGCAGTGATCCCTCAGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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