Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6375
Gene name
LocationContig_58:101496..102639
Strand-
Gene length (bp)1143
Transcript length (bp)1143
Coding sequence length (bp)1143
Protein length (aa) 381

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04909 Amidohydro_2 Amidohydrolase 4.5E-25 9 377

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q54LN9|ACMSD_DICDI 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Dictyostelium discoideum GN=acmsd PE=3 SV=1 82 378 4.0E-24
sp|Q8TDX5|ACMSD_HUMAN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Homo sapiens GN=ACMSD PE=1 SV=1 9 380 3.0E-21
sp|Q8R5M5|ACMSD_RAT 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Rattus norvegicus GN=Acmsd PE=1 SV=1 9 380 4.0E-20
sp|Q8R519|ACMSD_MOUSE 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Mus musculus GN=Acmsd PE=1 SV=2 9 380 5.0E-20
sp|Q0II68|ACMSD_BOVIN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Bos taurus GN=ACMSD PE=2 SV=1 9 380 5.0E-20

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6375
MALSKPTVVDIHTHMYTPSYIKLLQGRSAIPLVRQFAQAPEPRLVLFESESRALAEALRDPSSAAKTVGRALTPD
YTSLQHKMSFMDAHGIDISVVSPANPWLDFIAADEAGQVAQDVNTEMADMCEQQPGRLYFFGVLPLRATLETVMS
SVQHLQGLQPCRGVIMGTNGMGNGMDDKKLLPVFEALAASQLTLFLHPHQGLPQALGSSSGGADYGHVLPLALGF
PFETTIGVTRMYLSGVFDAVRNLRLILAHSGGTLPFLAGRIESCIQHDAELARAAKGGKERRSVWNVLREQIYLD
ALVYSDVGVAAAIGASGADRLMFGSDHPFFPPLAGMDTDGMWPSVSINATAVTKAVGEGTPEAKAIMGANAIKIL
GLEQK*
Coding >OphauB2|6375
ATGGCTCTCTCCAAGCCCACTGTGGTTGACATCCACACACACATGTACACGCCCTCGTACATCAAGCTTCTCCAA
GGGCGGTCGGCCATTCCACTGGTGCGCCAGTTTGCCCAGGCGCCCGAGCCACGCCTGGTGCTGTTCGAGTCGGAG
TCGCGCGCTCTGGCCGAGGCACTGCGCGACCCTTCGAGCGCGGCAAAGACTGTCGGGCGGGCGCTGACGCCAGAC
TACACGTCGTTGCAGCACAAAATGAGCTTCATGGACGCGCACGGCATCGACATCTCAGTCGTGTCGCCGGCGAAT
CCCTGGCTCGATTTTATTGCTGCCGACGAGGCGGGCCAGGTGGCACAAGACGTCAACACGGAAATGGCCGACATG
TGCGAACAGCAGCCCGGACGCCTCTACTTCTTCGGTGTCTTGCCGCTCAGGGCCACGCTGGAGACGGTCATGAGC
TCTGTGCAGCACTTGCAAGGGCTGCAGCCATGTCGCGGCGTCATCATGGGCACCAACGGCATGGGCAACGGCATG
GATGACAAGAAGCTGCTGCCCGTGTTTGAGGCGCTAGCAGCAAGCCAGCTGACCCTCTTCTTGCATCCGCACCAG
GGACTGCCCCAGGCGCTGGGCAGCAGCAGCGGTGGCGCCGACTACGGACACGTGCTCCCGCTCGCGCTGGGCTTC
CCCTTTGAGACGACGATTGGCGTGACGCGCATGTACCTGTCAGGCGTTTTTGACGCAGTGCGCAATCTGCGCCTC
ATCTTGGCCCATAGTGGGGGAACGCTTCCCTTTCTGGCGGGCCGCATCGAGAGCTGCATCCAGCACGATGCCGAG
CTGGCGAGGGCGGCAAAGGGGGGCAAGGAGAGACGCAGTGTGTGGAATGTGCTGCGCGAGCAAATCTACCTCGAC
GCCCTTGTCTACTCGGACGTGGGCGTGGCGGCTGCCATTGGGGCCAGCGGTGCCGACAGGCTCATGTTTGGCAGC
GACCACCCCTTCTTCCCCCCGCTCGCAGGCATGGACACGGACGGCATGTGGCCCAGTGTGAGCATCAATGCCACT
GCCGTCACCAAGGCGGTGGGTGAGGGGACGCCCGAGGCCAAGGCCATTATGGGGGCCAACGCCATCAAGATTCTC
GGCCTGGAGCAAAAGTAG
Transcript >OphauB2|6375
ATGGCTCTCTCCAAGCCCACTGTGGTTGACATCCACACACACATGTACACGCCCTCGTACATCAAGCTTCTCCAA
GGGCGGTCGGCCATTCCACTGGTGCGCCAGTTTGCCCAGGCGCCCGAGCCACGCCTGGTGCTGTTCGAGTCGGAG
TCGCGCGCTCTGGCCGAGGCACTGCGCGACCCTTCGAGCGCGGCAAAGACTGTCGGGCGGGCGCTGACGCCAGAC
TACACGTCGTTGCAGCACAAAATGAGCTTCATGGACGCGCACGGCATCGACATCTCAGTCGTGTCGCCGGCGAAT
CCCTGGCTCGATTTTATTGCTGCCGACGAGGCGGGCCAGGTGGCACAAGACGTCAACACGGAAATGGCCGACATG
TGCGAACAGCAGCCCGGACGCCTCTACTTCTTCGGTGTCTTGCCGCTCAGGGCCACGCTGGAGACGGTCATGAGC
TCTGTGCAGCACTTGCAAGGGCTGCAGCCATGTCGCGGCGTCATCATGGGCACCAACGGCATGGGCAACGGCATG
GATGACAAGAAGCTGCTGCCCGTGTTTGAGGCGCTAGCAGCAAGCCAGCTGACCCTCTTCTTGCATCCGCACCAG
GGACTGCCCCAGGCGCTGGGCAGCAGCAGCGGTGGCGCCGACTACGGACACGTGCTCCCGCTCGCGCTGGGCTTC
CCCTTTGAGACGACGATTGGCGTGACGCGCATGTACCTGTCAGGCGTTTTTGACGCAGTGCGCAATCTGCGCCTC
ATCTTGGCCCATAGTGGGGGAACGCTTCCCTTTCTGGCGGGCCGCATCGAGAGCTGCATCCAGCACGATGCCGAG
CTGGCGAGGGCGGCAAAGGGGGGCAAGGAGAGACGCAGTGTGTGGAATGTGCTGCGCGAGCAAATCTACCTCGAC
GCCCTTGTCTACTCGGACGTGGGCGTGGCGGCTGCCATTGGGGCCAGCGGTGCCGACAGGCTCATGTTTGGCAGC
GACCACCCCTTCTTCCCCCCGCTCGCAGGCATGGACACGGACGGCATGTGGCCCAGTGTGAGCATCAATGCCACT
GCCGTCACCAAGGCGGTGGGTGAGGGGACGCCCGAGGCCAAGGCCATTATGGGGGCCAACGCCATCAAGATTCTC
GGCCTGGAGCAAAAGTAG
Gene >OphauB2|6375
ATGGCTCTCTCCAAGCCCACTGTGGTTGACATCCACACACACATGTACACGCCCTCGTACATCAAGCTTCTCCAA
GGGCGGTCGGCCATTCCACTGGTGCGCCAGTTTGCCCAGGCGCCCGAGCCACGCCTGGTGCTGTTCGAGTCGGAG
TCGCGCGCTCTGGCCGAGGCACTGCGCGACCCTTCGAGCGCGGCAAAGACTGTCGGGCGGGCGCTGACGCCAGAC
TACACGTCGTTGCAGCACAAAATGAGCTTCATGGACGCGCACGGCATCGACATCTCAGTCGTGTCGCCGGCGAAT
CCCTGGCTCGATTTTATTGCTGCCGACGAGGCGGGCCAGGTGGCACAAGACGTCAACACGGAAATGGCCGACATG
TGCGAACAGCAGCCCGGACGCCTCTACTTCTTCGGTGTCTTGCCGCTCAGGGCCACGCTGGAGACGGTCATGAGC
TCTGTGCAGCACTTGCAAGGGCTGCAGCCATGTCGCGGCGTCATCATGGGCACCAACGGCATGGGCAACGGCATG
GATGACAAGAAGCTGCTGCCCGTGTTTGAGGCGCTAGCAGCAAGCCAGCTGACCCTCTTCTTGCATCCGCACCAG
GGACTGCCCCAGGCGCTGGGCAGCAGCAGCGGTGGCGCCGACTACGGACACGTGCTCCCGCTCGCGCTGGGCTTC
CCCTTTGAGACGACGATTGGCGTGACGCGCATGTACCTGTCAGGCGTTTTTGACGCAGTGCGCAATCTGCGCCTC
ATCTTGGCCCATAGTGGGGGAACGCTTCCCTTTCTGGCGGGCCGCATCGAGAGCTGCATCCAGCACGATGCCGAG
CTGGCGAGGGCGGCAAAGGGGGGCAAGGAGAGACGCAGTGTGTGGAATGTGCTGCGCGAGCAAATCTACCTCGAC
GCCCTTGTCTACTCGGACGTGGGCGTGGCGGCTGCCATTGGGGCCAGCGGTGCCGACAGGCTCATGTTTGGCAGC
GACCACCCCTTCTTCCCCCCGCTCGCAGGCATGGACACGGACGGCATGTGGCCCAGTGTGAGCATCAATGCCACT
GCCGTCACCAAGGCGGTGGGTGAGGGGACGCCCGAGGCCAAGGCCATTATGGGGGCCAACGCCATCAAGATTCTC
GGCCTGGAGCAAAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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