© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6352 |
| Gene name | |
| Location | Contig_58:41584..42891 |
| Strand | - |
| Gene length (bp) | 1307 |
| Transcript length (bp) | 1182 |
| Coding sequence length (bp) | 1182 |
| Protein length (aa) | 394 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 5.2E-10 | 93 | 205 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 1.7E-09 | 94 | 373 |
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 1.1E-06 | 94 | 202 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P0A573|Y2734_MYCBO | Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 | 66 | 221 | 7.0E-06 |
| sp|P9WNH3|Y2715_MYCTU | Uncharacterized protein Rv2715 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2715 PE=1 SV=1 | 66 | 221 | 7.0E-06 |
| sp|P9WNH2|Y2715_MYCTO | Uncharacterized protein MT2788 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2788 PE=3 SV=1 | 66 | 221 | 7.0E-06 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 413 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6352 MALAIPWPLSTAALVAATALATTALLVLARTALWPRRRRVLPSPLHTLAETKEPRMRLGSWLYPTDAFPGGRDVE TPYGSMRVYEFGPQDGPKVLFVHGISTPCMTLSLLAQACVARGCRVMLFDLFGRGYSDGVGDLPHDARLYSSQIL CALASSPLPWTGSQARLRLVGYSMGGSLAVCFANAFPDLVASLVLMAPAGLIRPTDFGTLSRILFRSGLLPDRIV TVLARRRLQAPIVASRLSPKAMAAATLAAAEATNLNRATATNKETRSRDKQQEPPLQERMLEYVRWMVLHHHGFV AAFMSCIRHAPLLDESESWRLLARRPPGSTAVLLADADEIINADHYTSHGLALVGGPDRVVWRVLPGSHDFVMTH VESVMGVLDDFWDMKKLG* |
| Coding | >OphauB2|6352 ATGGCCTTGGCGATACCATGGCCCTTGTCAACAGCAGCGCTCGTGGCGGCAACAGCCCTGGCGACAACGGCTTTG CTGGTGCTGGCGCGCACAGCTCTCTGGCCAAGACGCAGGCGCGTGCTGCCAAGTCCGCTGCACACATTGGCCGAG ACCAAGGAGCCGAGAATGCGCCTGGGCAGCTGGTTATACCCGACGGATGCCTTTCCTGGAGGCCGTGACGTCGAG ACACCATACGGCTCGATGCGCGTCTACGAATTCGGCCCTCAAGACGGACCAAAGGTGCTTTTTGTGCATGGCATC AGTACACCTTGTATGACACTATCCCTGCTTGCTCAGGCCTGTGTTGCCCGTGGCTGCCGCGTCATGCTATTTGAT CTCTTTGGCCGTGGCTATTCCGATGGTGTTGGCGATCTTCCCCACGATGCCCGTCTTTACTCGTCGCAGATACTG TGCGCCCTTGCCTCGAGCCCGCTGCCCTGGACGGGATCTCAGGCACGACTGCGCCTGGTTGGTTATTCCATGGGC GGCTCTCTGGCAGTCTGCTTCGCCAATGCCTTCCCCGACCTTGTCGCCTCGCTCGTCCTCATGGCCCCGGCAGGA TTGATTCGGCCCACCGACTTTGGCACCCTGTCTCGTATCCTCTTCCGTTCTGGCCTGCTGCCCGATCGCATTGTT ACTGTCCTTGCCCGACGGCGCTTGCAGGCTCCCATTGTTGCCTCTCGCCTCTCGCCCAAGGCCATGGCGGCAGCC ACCCTGGCTGCGGCCGAGGCAACCAATCTGAATAGGGCGACAGCCACAAACAAGGAAACTCGGTCCAGGGATAAG CAACAGGAGCCTCCTCTACAGGAACGCATGCTAGAATACGTCCGCTGGATGGTTCTTCATCACCATGGCTTCGTG GCTGCCTTTATGTCGTGCATTCGTCATGCGCCTCTGCTGGATGAGTCGGAGAGCTGGAGGCTCCTGGCCCGTCGC CCTCCTGGATCTACCGCTGTTTTGCTCGCCGACGCTGACGAAATTATCAATGCCGACCATTACACTAGCCATGGC CTGGCTCTAGTGGGCGGACCAGATCGTGTCGTATGGCGTGTGCTTCCAGGCAGCCACGACTTCGTCATGACGCAT GTTGAGTCTGTCATGGGGGTACTTGATGACTTTTGGGACATGAAGAAGCTTGGCTAG |
| Transcript | >OphauB2|6352 ATGGCCTTGGCGATACCATGGCCCTTGTCAACAGCAGCGCTCGTGGCGGCAACAGCCCTGGCGACAACGGCTTTG CTGGTGCTGGCGCGCACAGCTCTCTGGCCAAGACGCAGGCGCGTGCTGCCAAGTCCGCTGCACACATTGGCCGAG ACCAAGGAGCCGAGAATGCGCCTGGGCAGCTGGTTATACCCGACGGATGCCTTTCCTGGAGGCCGTGACGTCGAG ACACCATACGGCTCGATGCGCGTCTACGAATTCGGCCCTCAAGACGGACCAAAGGTGCTTTTTGTGCATGGCATC AGTACACCTTGTATGACACTATCCCTGCTTGCTCAGGCCTGTGTTGCCCGTGGCTGCCGCGTCATGCTATTTGAT CTCTTTGGCCGTGGCTATTCCGATGGTGTTGGCGATCTTCCCCACGATGCCCGTCTTTACTCGTCGCAGATACTG TGCGCCCTTGCCTCGAGCCCGCTGCCCTGGACGGGATCTCAGGCACGACTGCGCCTGGTTGGTTATTCCATGGGC GGCTCTCTGGCAGTCTGCTTCGCCAATGCCTTCCCCGACCTTGTCGCCTCGCTCGTCCTCATGGCCCCGGCAGGA TTGATTCGGCCCACCGACTTTGGCACCCTGTCTCGTATCCTCTTCCGTTCTGGCCTGCTGCCCGATCGCATTGTT ACTGTCCTTGCCCGACGGCGCTTGCAGGCTCCCATTGTTGCCTCTCGCCTCTCGCCCAAGGCCATGGCGGCAGCC ACCCTGGCTGCGGCCGAGGCAACCAATCTGAATAGGGCGACAGCCACAAACAAGGAAACTCGGTCCAGGGATAAG CAACAGGAGCCTCCTCTACAGGAACGCATGCTAGAATACGTCCGCTGGATGGTTCTTCATCACCATGGCTTCGTG GCTGCCTTTATGTCGTGCATTCGTCATGCGCCTCTGCTGGATGAGTCGGAGAGCTGGAGGCTCCTGGCCCGTCGC CCTCCTGGATCTACCGCTGTTTTGCTCGCCGACGCTGACGAAATTATCAATGCCGACCATTACACTAGCCATGGC CTGGCTCTAGTGGGCGGACCAGATCGTGTCGTATGGCGTGTGCTTCCAGGCAGCCACGACTTCGTCATGACGCAT GTTGAGTCTGTCATGGGGGTACTTGATGACTTTTGGGACATGAAGAAGCTTGGCTAG |
| Gene | >OphauB2|6352 ATGGCCTTGGCGATACCATGGCCCTTGTCAACAGCAGCGCTCGTGGCGGCAACAGCCCTGGCGACAACGGCTTTG CTGGTGCTGGCGCGCACAGCTCTCTGGCCAAGACGCAGGCGCGTGCTGCCAAGTCCGCTGCACACATTGGCCGAG ACCAAGGAGCCGAGAATGCGCCTGGGCAGCTGGTTATACCCGACGGATGCCTTTCCTGGAGGCCGTGACGTCGAG ACACCAGTCAGCTTCCTGAGCTCAAGTCGGTGCGCCACAGACGAGGCACTGCTGACAGCACCATGATTAAACAGT ACGGCTCGATGCGCGTCTACGAATTCGGCCCTCAAGACGGACCAAAGGTGCTTTTTGTGCATGGCATCAGTACAC CTTGTATGACACTATCCCTGCTTGCTCAGGCCTGTGTTGCCCGTGGCTGCCGCGTCATGCTATTTGTACGTCACG TCTGCCTGCTGCCTGCCAGAGTGGCCGCTAATTGGATGATGCAACAGGATCTCTTTGGCCGTGGCTATTCCGATG GTGTTGGCGATCTTCCCCACGATGCCCGTCTTTACTCGTCGCAGATACTGTGCGCCCTTGCCTCGAGCCCGCTGC CCTGGACGGGATCTCAGGCACGACTGCGCCTGGTTGGTTATTCCATGGGCGGCTCTCTGGCAGTCTGCTTCGCCA ATGCCTTCCCCGACCTTGTCGCCTCGCTCGTCCTCATGGCCCCGGCAGGATTGATTCGGCCCACCGACTTTGGCA CCCTGTCTCGTATCCTCTTCCGTTCTGGCCTGCTGCCCGATCGCATTGTTACTGTCCTTGCCCGACGGCGCTTGC AGGCTCCCATTGTTGCCTCTCGCCTCTCGCCCAAGGCCATGGCGGCAGCCACCCTGGCTGCGGCCGAGGCAACCA ATCTGAATAGGGCGACAGCCACAAACAAGGAAACTCGGTCCAGGGATAAGCAACAGGAGCCTCCTCTACAGGAAC GCATGCTAGAATACGTCCGCTGGATGGTTCTTCATCACCATGGCTTCGTGGCTGCCTTTATGTCGTGCATTCGTC ATGCGCCTCTGCTGGATGAGTCGGAGAGCTGGAGGCTCCTGGCCCGTCGCCCTCCTGGATCTACCGCTGTTTTGC TCGCCGACGCTGACGAAATTATCAATGCCGACCATTACACTAGCCATGGCCTGGCTCTAGTGGGCGGACCAGATC GTGTCGTATGGCGTGTGCTTCCAGGCAGCCACGACTTCGTCATGACGCATGTTGAGTCTGTCATGGGGGTACTTG ATGACTTTTGGGACATGAAGAAGCTTGGCTAG |