© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6338 |
| Gene name | |
| Location | Contig_57:97582..99423 |
| Strand | - |
| Gene length (bp) | 1841 |
| Transcript length (bp) | 1659 |
| Coding sequence length (bp) | 1659 |
| Protein length (aa) | 553 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.6E-44 | 71 | 517 |
| PF00324 | AA_permease | Amino acid permease | 1.9E-24 | 87 | 527 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 39 | 527 | 3.0E-73 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 47 | 515 | 2.0E-61 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 33 | 545 | 7.0E-54 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 1 | 541 | 3.0E-49 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 53 | 541 | 5.0E-48 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 39 | 527 | 3.0E-73 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 47 | 515 | 2.0E-61 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 33 | 545 | 7.0E-54 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 1 | 541 | 3.0E-49 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 53 | 541 | 5.0E-48 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 32 | 552 | 4.0E-46 |
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 22 | 551 | 1.0E-44 |
| sp|Q10087|YAO8_SCHPO | Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 | 33 | 550 | 5.0E-40 |
| sp|O74248|GPT1_CANAX | Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 | 41 | 548 | 4.0E-38 |
| sp|Q9C0Z0|YKM2_SCHPO | Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 | 39 | 551 | 2.0E-37 |
| sp|Q09887|YC9D_SCHPO | Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 | 38 | 541 | 7.0E-35 |
| sp|O59942|AAP2_NEUCR | Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 | 50 | 541 | 2.0E-33 |
| sp|P32837|UGA4_YEAST | GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 | 41 | 516 | 1.0E-31 |
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 33 | 526 | 5.0E-26 |
| sp|P36029|TPO5_YEAST | Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 | 47 | 552 | 2.0E-10 |
| sp|O07576|YHDG_BACSU | Uncharacterized amino acid permease YhdG OS=Bacillus subtilis (strain 168) GN=yhdG PE=2 SV=1 | 50 | 448 | 4.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 72 | 94 | 22 |
| 2 | 114 | 136 | 22 |
| 3 | 157 | 179 | 22 |
| 4 | 189 | 211 | 22 |
| 5 | 223 | 245 | 22 |
| 6 | 272 | 289 | 17 |
| 7 | 310 | 332 | 22 |
| 8 | 360 | 382 | 22 |
| 9 | 408 | 430 | 22 |
| 10 | 434 | 456 | 22 |
| 11 | 481 | 503 | 22 |
| 12 | 508 | 530 | 22 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 30 | Decorating |
| Orthofinder run ID | 4 |
| Orthogroup | 6251 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6338 MSKMLTSSRVKAFRGLRGNGWERKGHRLLDAPDEALRSERDASQVISRDDELLATLGYKRELNRGLGLFENWAAT FSCMNFVSGMPVLFGWVMMTGGPQAAITSWTVVSTVSCLLALAMAEIAAALPTAGGIYYWAYRLGGSEWGPFLSW MTAWWNWSAWILAVPGTQQGATNFLVSALQINYPDADFVSQSWFSLVVILLGLVIALIPNITNQSLLRIYFRFAI GIFLILFFLFWIWFPIAVAGRFQSPSFVFQTFHNGINHGPTQQASNAYCWAISFLFGAWEFGGYDASAHLAEETK DASKTVARGMYLSTLSTTLLSIPTLILILFCIQDFDALISATYANNWAEFLVQVVGPRGATAILLLSWIDCTCAT AAVILSAQRVTFAISRDNILPGSHLFRRVSGNNAAPVNAALLVVAIAALVSLTVLGSSVAFSAITATTVICQSMS YLFVLFTRYTFGKTTFEPAAWNLGFLSRPIGYLSILWLTFLSCILLLPQVFPVTMRTLNYAPICLIIVTAVSFIG WLLPFGMGGRHWFKGPCNTVAAQPEET* |
| Coding | >OphauB2|6338 ATGTCCAAGATGTTGACTTCGTCTCGCGTCAAGGCGTTTCGTGGCTTGAGGGGCAACGGGTGGGAGCGCAAGGGC CACCGGCTGCTGGATGCGCCAGACGAGGCGCTGCGGTCGGAGCGAGATGCTTCGCAGGTGATTTCTCGCGATGAC GAGCTGCTGGCTACGCTGGGCTACAAGCGAGAGTTGAACCGCGGCCTGGGACTGTTTGAGAATTGGGCGGCTACG TTTTCGTGTATGAACTTCGTCTCGGGAATGCCCGTCTTGTTTGGCTGGGTCATGATGACTGGCGGGCCCCAAGCT GCCATTACCTCGTGGACCGTTGTCAGTACCGTCTCGTGCTTGCTTGCCTTGGCCATGGCTGAGATTGCCGCCGCC CTGCCAACGGCTGGGGGCATCTACTACTGGGCCTATCGCCTAGGAGGCTCGGAATGGGGTCCCTTTCTGTCCTGG ATGACGGCATGGTGGAACTGGTCGGCTTGGATCCTGGCTGTCCCCGGCACGCAGCAAGGCGCCACAAACTTTCTC GTTTCCGCTCTTCAAATAAACTACCCCGATGCCGATTTCGTCAGCCAGAGCTGGTTCTCCTTGGTCGTTATCCTT CTCGGACTCGTCATTGCCCTGATTCCAAACATTACCAACCAAAGCTTGCTACGCATATATTTCCGCTTTGCCATT GGCATCTTCTTGATTCTCTTTTTCCTTTTCTGGATCTGGTTTCCCATTGCCGTGGCTGGCCGATTTCAGTCCCCG AGCTTCGTCTTCCAGACCTTCCACAACGGCATCAACCACGGCCCGACGCAACAGGCTTCAAATGCATACTGCTGG GCCATTAGCTTTCTCTTTGGCGCTTGGGAGTTTGGCGGCTACGATGCCTCGGCCCATTTGGCAGAGGAGACCAAG GACGCCAGCAAAACCGTGGCCCGAGGAATGTATCTCTCCACTCTCTCCACCACGCTTCTTTCCATTCCTACCCTC ATCTTGATTCTCTTTTGCATTCAGGACTTTGATGCCCTCATTTCTGCTACTTATGCCAACAACTGGGCCGAGTTT CTTGTTCAAGTCGTTGGCCCTCGCGGCGCCACCGCCATTTTGCTCCTTAGCTGGATCGACTGCACTTGCGCTACT GCTGCCGTTATTCTGTCTGCTCAGCGCGTCACTTTTGCCATTTCGCGCGACAACATTTTGCCCGGGTCGCACTTG TTTAGAAGAGTAAGCGGGAACAATGCCGCGCCAGTCAATGCTGCCTTGTTGGTCGTCGCCATTGCCGCCCTTGTC AGCCTTACTGTGCTTGGATCCTCAGTCGCCTTTAGTGCCATTACGGCAACGACTGTCATTTGCCAAAGCATGAGC TATCTGTTTGTCCTCTTCACTCGATACACCTTTGGCAAAACTACCTTTGAGCCGGCTGCATGGAATCTTGGCTTC CTGTCGCGCCCGATAGGATACCTTTCCATACTCTGGCTCACCTTTCTTTCATGTATTCTGCTACTGCCCCAGGTT TTCCCCGTGACTATGCGCACGCTAAACTATGCTCCGATCTGTCTTATTATTGTAACGGCTGTGTCTTTTATTGGG TGGCTTCTTCCTTTTGGAATGGGGGGGCGGCACTGGTTCAAAGGTCCATGCAATACGGTGGCGGCGCAGCCCGAG GAGACGTGA |
| Transcript | >OphauB2|6338 ATGTCCAAGATGTTGACTTCGTCTCGCGTCAAGGCGTTTCGTGGCTTGAGGGGCAACGGGTGGGAGCGCAAGGGC CACCGGCTGCTGGATGCGCCAGACGAGGCGCTGCGGTCGGAGCGAGATGCTTCGCAGGTGATTTCTCGCGATGAC GAGCTGCTGGCTACGCTGGGCTACAAGCGAGAGTTGAACCGCGGCCTGGGACTGTTTGAGAATTGGGCGGCTACG TTTTCGTGTATGAACTTCGTCTCGGGAATGCCCGTCTTGTTTGGCTGGGTCATGATGACTGGCGGGCCCCAAGCT GCCATTACCTCGTGGACCGTTGTCAGTACCGTCTCGTGCTTGCTTGCCTTGGCCATGGCTGAGATTGCCGCCGCC CTGCCAACGGCTGGGGGCATCTACTACTGGGCCTATCGCCTAGGAGGCTCGGAATGGGGTCCCTTTCTGTCCTGG ATGACGGCATGGTGGAACTGGTCGGCTTGGATCCTGGCTGTCCCCGGCACGCAGCAAGGCGCCACAAACTTTCTC GTTTCCGCTCTTCAAATAAACTACCCCGATGCCGATTTCGTCAGCCAGAGCTGGTTCTCCTTGGTCGTTATCCTT CTCGGACTCGTCATTGCCCTGATTCCAAACATTACCAACCAAAGCTTGCTACGCATATATTTCCGCTTTGCCATT GGCATCTTCTTGATTCTCTTTTTCCTTTTCTGGATCTGGTTTCCCATTGCCGTGGCTGGCCGATTTCAGTCCCCG AGCTTCGTCTTCCAGACCTTCCACAACGGCATCAACCACGGCCCGACGCAACAGGCTTCAAATGCATACTGCTGG GCCATTAGCTTTCTCTTTGGCGCTTGGGAGTTTGGCGGCTACGATGCCTCGGCCCATTTGGCAGAGGAGACCAAG GACGCCAGCAAAACCGTGGCCCGAGGAATGTATCTCTCCACTCTCTCCACCACGCTTCTTTCCATTCCTACCCTC ATCTTGATTCTCTTTTGCATTCAGGACTTTGATGCCCTCATTTCTGCTACTTATGCCAACAACTGGGCCGAGTTT CTTGTTCAAGTCGTTGGCCCTCGCGGCGCCACCGCCATTTTGCTCCTTAGCTGGATCGACTGCACTTGCGCTACT GCTGCCGTTATTCTGTCTGCTCAGCGCGTCACTTTTGCCATTTCGCGCGACAACATTTTGCCCGGGTCGCACTTG TTTAGAAGAGTAAGCGGGAACAATGCCGCGCCAGTCAATGCTGCCTTGTTGGTCGTCGCCATTGCCGCCCTTGTC AGCCTTACTGTGCTTGGATCCTCAGTCGCCTTTAGTGCCATTACGGCAACGACTGTCATTTGCCAAAGCATGAGC TATCTGTTTGTCCTCTTCACTCGATACACCTTTGGCAAAACTACCTTTGAGCCGGCTGCATGGAATCTTGGCTTC CTGTCGCGCCCGATAGGATACCTTTCCATACTCTGGCTCACCTTTCTTTCATGTATTCTGCTACTGCCCCAGGTT TTCCCCGTGACTATGCGCACGCTAAACTATGCTCCGATCTGTCTTATTATTGTAACGGCTGTGTCTTTTATTGGG TGGCTTCTTCCTTTTGGAATGGGGGGGCGGCACTGGTTCAAAGGTCCATGCAATACGGTGGCGGCGCAGCCCGAG GAGACGTGA |
| Gene | >OphauB2|6338 ATGTCCAAGATGTTGACTTCGTCTCGCGTCAAGGCGTTTCGTGGCTTGAGGGGCAACGGGTGGGAGCGCAAGGGC CACCGGCTGCTGGATGCGCCAGACGAGGCGCTGCGGTCGGAGCGAGATGCTTCGCAGGTGATTTCTCGCGATGAC GAGCTGCTGGCTACGCTGGGCTACAAGCGAGGTAGCATTGGCCTCATGGACGGTCGAGGTTGACGCAACTGACGG AATCCTTGGTAGAGTTGAACCGCGGCCTGGGACTGTTTGAGAATTGGGCGGCTACGTTTTCGGTTGGCTTCCTTG GCCATGGCCCCCCCCCCTGGAGATGGGCGCACAAGCTAATACGACGCAGTGTATGAACTTCGTCTCGGGAATGCC CGTCTTGTTTGGCTGGGTCATGATGACTGGCGGGCCCCAAGCTGCCATTACCTCGTGGACCGTTGTCAGTACCGT CTCGTGCTTGCTTGCCTTGGCCATGGCTGAGATTGCCGCCGCCCTGCCAACGGCTGGGGGCATCTACTACTGGGC CTATCGCCTAGGAGGCTCGGAATGGGGTCCCTTTCTGTCCTGGATGACGGCAGTAGGCGCCTTTGCCCCTACCTT GAGTACTCCCATGTCGTGCTCGCTCTGACGCCTTTTTGCAGTGGTGGAACTGGTCGGCTTGGATCCTGGCTGTCC CCGGCACGCAGCAAGGCGCCACAAACTTTCTCGTTTCCGCTCTTCAAATAAACTACCCCGATGCCGATTTCGTCA GCCAGAGCTGGTTCTCCTTGGTCGTTATCCTTCTCGGACTCGTCATTGCCCTGATTCCAAACATTACCAACCAAA GCTTGCTACGCATATATTTCCGCTTTGCCATTGGCATCTTCTTGATTCTCTTTTTCCTTTTCTGGATCTGGTTTC CCATTGCCGTGGCTGGCCGATTTCAGTCCCCGAGCTTCGTCTTCCAGACCTTCCACAACGGCATCAACCACGGCC CGACGCAACAGGCTTCAAATGCATACTGCTGGGCCATTAGCTTTCTCTTTGGCGCTTGGGAGTTTGGCGGCTACG ATGCCTCGGCCCATTTGGCAGAGGAGACCAAGGACGCCAGCAAAACCGTGGCCCGAGGAATGTATCTCTCCACTC TCTCCACCACGCTTCTTTCCATTCCTACCCTCATCTTGATTCTCTTTTGCATTCAGGACTTTGATGCCCTCATTT CTGCTACTTATGCCAACAACTGGGCCGAGTTTCTTGTTCAAGTCGTTGGCCCTCGCGGCGCCACCGCCATTTTGC TCCTTAGCTGGATCGACTGCACTTGCGCTACTGCTGCCGTTATTCTGTCTGCTCAGCGCGTCACTTTTGCCATTT CGCGCGACAACATTTTGCCCGGGTCGCACTTGTTTAGAAGAGTAAGCGGGAACAATGCCGCGCCAGTCAATGCTG CCTTGTTGGTCGTCGCCATTGCCGCCCTTGTCAGCCTTACTGTGCTTGGATCCTCAGTCGCCTTTAGTGCCATTA CGGCAACGACTGTCATTTGCCAAAGCATGAGCTATCTGTTTGTCCTCTTCACTCGATACACCTTTGGCAAAACTA CCTTTGAGCCGGCTGCATGGAATCTTGGCTTCCTGTCGCGCCCGATAGGATACCTTTCCATACTCTGGCTCACCT TTCTTTCATGTATTCTGCTACTGCCCCAGGTTTTCCCCGTGACTATGCGCACGCTAAACTATGCTCCGATCTGTC TTATTATTGTAACGGCTGTGTCTTTTATTGGGTGGCTTCTTCCTTTTGGAATGGGGGGGCGGCACTGGTTCAAAG GTCCATGCAATACGGTGGCGGCGCAGCCCGAGGAGACGTGA |