© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6331 |
| Gene name | |
| Location | Contig_57:79271..79931 |
| Strand | + |
| Gene length (bp) | 660 |
| Transcript length (bp) | 660 |
| Coding sequence length (bp) | 660 |
| Protein length (aa) | 220 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02214 | BTB_2 | BTB/POZ domain | 1.0E-06 | 18 | 108 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9H3F6|BACD3_HUMAN | BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 OS=Homo sapiens GN=KCTD10 PE=1 SV=1 | 18 | 112 | 3.0E-07 |
| sp|Q7TPL3|BACD3_RAT | BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 OS=Rattus norvegicus GN=Kctd10 PE=1 SV=1 | 18 | 112 | 9.0E-07 |
| sp|Q54KH0|Y7435_DICDI | Uncharacterized protein DDB_G0287347 OS=Dictyostelium discoideum GN=DDB_G0287347 PE=3 SV=2 | 27 | 122 | 9.0E-07 |
| sp|Q922M3|BACD3_MOUSE | BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 OS=Mus musculus GN=Kctd10 PE=1 SV=1 | 18 | 112 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051260 | protein homooligomerization | Yes |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0009987 | cellular process | No |
| GO:0065003 | protein-containing complex assembly | No |
| GO:0008150 | biological_process | No |
| GO:0016043 | cellular component organization | No |
| GO:0043933 | protein-containing complex organization | No |
| GO:0051259 | protein complex oligomerization | No |
| GO:0022607 | cellular component assembly | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6331 MRPPIANGSASAIQATKIKLQIGERIFVTTLETLVRESTYFAALLTGRWETIAQPIFVDADAELFEYVLRYLRRG LFPLFYTTGIGHDHAQYYALLGEAKFFGIQKLVMWLQHRRYFQAITTTMDFEIFKTTQAVLDSGSGVDSHTTTQL FPWWSNQKVYVCPRGISLHRGAPTRCGRMCLRSQRNDANVYEDEAVLKMLKVMTKTDINYYVMESGLYT* |
| Coding | >OphauB2|6331 ATGCGCCCCCCCATTGCAAACGGATCCGCCTCCGCCATTCAAGCTACTAAGATCAAGCTCCAAATCGGCGAACGC ATCTTTGTCACCACGCTCGAAACCCTGGTTCGCGAAAGCACCTACTTTGCCGCCCTCCTAACTGGCCGCTGGGAA ACTATTGCGCAACCCATTTTTGTCGACGCCGACGCCGAGCTCTTTGAATACGTGCTACGCTACCTCCGCCGCGGA CTCTTCCCCCTCTTCTACACGACAGGCATAGGCCACGACCACGCCCAATACTATGCCCTGCTGGGCGAGGCCAAG TTTTTTGGCATTCAAAAACTAGTGATGTGGCTGCAGCATAGGCGCTACTTTCAAGCAATCACAACTACAATGGAC TTTGAAATATTTAAAACTACCCAAGCGGTGCTCGACTCGGGCAGCGGCGTCGACTCGCACACCACGACTCAACTC TTTCCCTGGTGGTCCAATCAAAAGGTGTATGTTTGTCCGCGCGGCATCTCGCTGCATCGGGGGGCGCCGACGCGC TGTGGGCGAATGTGTCTCAGGTCGCAGCGCAACGACGCCAATGTGTACGAGGACGAGGCGGTGCTAAAGATGCTA AAGGTTATGACCAAGACGGATATTAATTACTATGTCATGGAGTCGGGGCTTTATACTTGA |
| Transcript | >OphauB2|6331 ATGCGCCCCCCCATTGCAAACGGATCCGCCTCCGCCATTCAAGCTACTAAGATCAAGCTCCAAATCGGCGAACGC ATCTTTGTCACCACGCTCGAAACCCTGGTTCGCGAAAGCACCTACTTTGCCGCCCTCCTAACTGGCCGCTGGGAA ACTATTGCGCAACCCATTTTTGTCGACGCCGACGCCGAGCTCTTTGAATACGTGCTACGCTACCTCCGCCGCGGA CTCTTCCCCCTCTTCTACACGACAGGCATAGGCCACGACCACGCCCAATACTATGCCCTGCTGGGCGAGGCCAAG TTTTTTGGCATTCAAAAACTAGTGATGTGGCTGCAGCATAGGCGCTACTTTCAAGCAATCACAACTACAATGGAC TTTGAAATATTTAAAACTACCCAAGCGGTGCTCGACTCGGGCAGCGGCGTCGACTCGCACACCACGACTCAACTC TTTCCCTGGTGGTCCAATCAAAAGGTGTATGTTTGTCCGCGCGGCATCTCGCTGCATCGGGGGGCGCCGACGCGC TGTGGGCGAATGTGTCTCAGGTCGCAGCGCAACGACGCCAATGTGTACGAGGACGAGGCGGTGCTAAAGATGCTA AAGGTTATGACCAAGACGGATATTAATTACTATGTCATGGAGTCGGGGCTTTATACTTGA |
| Gene | >OphauB2|6331 ATGCGCCCCCCCATTGCAAACGGATCCGCCTCCGCCATTCAAGCTACTAAGATCAAGCTCCAAATCGGCGAACGC ATCTTTGTCACCACGCTCGAAACCCTGGTTCGCGAAAGCACCTACTTTGCCGCCCTCCTAACTGGCCGCTGGGAA ACTATTGCGCAACCCATTTTTGTCGACGCCGACGCCGAGCTCTTTGAATACGTGCTACGCTACCTCCGCCGCGGA CTCTTCCCCCTCTTCTACACGACAGGCATAGGCCACGACCACGCCCAATACTATGCCCTGCTGGGCGAGGCCAAG TTTTTTGGCATTCAAAAACTAGTGATGTGGCTGCAGCATAGGCGCTACTTTCAAGCAATCACAACTACAATGGAC TTTGAAATATTTAAAACTACCCAAGCGGTGCTCGACTCGGGCAGCGGCGTCGACTCGCACACCACGACTCAACTC TTTCCCTGGTGGTCCAATCAAAAGGTGTATGTTTGTCCGCGCGGCATCTCGCTGCATCGGGGGGCGCCGACGCGC TGTGGGCGAATGTGTCTCAGGTCGCAGCGCAACGACGCCAATGTGTACGAGGACGAGGCGGTGCTAAAGATGCTA AAGGTTATGACCAAGACGGATATTAATTACTATGTCATGGAGTCGGGGCTTTATACTTGA |