© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6251 |
| Gene name | |
| Location | Contig_558:114..1022 |
| Strand | + |
| Gene length (bp) | 908 |
| Transcript length (bp) | 663 |
| Coding sequence length (bp) | 663 |
| Protein length (aa) | 221 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54RZ2|YIPF6_DICDI | Protein YIPF6 homolog OS=Dictyostelium discoideum GN=yipf6 PE=3 SV=2 | 72 | 217 | 3.0E-16 |
| sp|Q9P6P8|YIP4_SCHPO | Protein YIP4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.13c PE=1 SV=1 | 155 | 217 | 3.0E-16 |
| sp|A6QLC6|YIPF6_BOVIN | Protein YIPF6 OS=Bos taurus GN=YIPF6 PE=2 SV=1 | 55 | 217 | 7.0E-16 |
| sp|Q96EC8|YIPF6_HUMAN | Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=1 SV=2 | 55 | 217 | 1.0E-15 |
| sp|Q8BR70|YIPF6_MOUSE | Protein YIPF6 OS=Mus musculus GN=Yipf6 PE=1 SV=1 | 61 | 217 | 3.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54RZ2|YIPF6_DICDI | Protein YIPF6 homolog OS=Dictyostelium discoideum GN=yipf6 PE=3 SV=2 | 72 | 217 | 3.0E-16 |
| sp|Q9P6P8|YIP4_SCHPO | Protein YIP4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC644.13c PE=1 SV=1 | 155 | 217 | 3.0E-16 |
| sp|A6QLC6|YIPF6_BOVIN | Protein YIPF6 OS=Bos taurus GN=YIPF6 PE=2 SV=1 | 55 | 217 | 7.0E-16 |
| sp|Q96EC8|YIPF6_HUMAN | Protein YIPF6 OS=Homo sapiens GN=YIPF6 PE=1 SV=2 | 55 | 217 | 1.0E-15 |
| sp|Q8BR70|YIPF6_MOUSE | Protein YIPF6 OS=Mus musculus GN=Yipf6 PE=1 SV=1 | 61 | 217 | 3.0E-15 |
| sp|Q4QQU5|YIPF6_RAT | Protein YIPF6 OS=Rattus norvegicus GN=Yipf6 PE=1 SV=1 | 61 | 217 | 5.0E-15 |
| sp|Q28CH8|YIPF6_XENTR | Protein YIPF6 OS=Xenopus tropicalis GN=yipf6 PE=2 SV=1 | 35 | 217 | 1.0E-14 |
| sp|Q6IQ85|YIPF6_DANRE | Protein YIPF6 OS=Danio rerio GN=yipf6 PE=2 SV=1 | 72 | 217 | 2.0E-13 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 160 | 178 | 18 |
| 2 | 193 | 215 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6251 MASSTRDDYNQPPLEDDDLIDPDNATLDDLDDPLGRERLTGNIGSTAPSSRPLNESYLTSSIPGEDRRAAQNTID ETVWQTLRRDLLAVWAKLREVLYPRYLLGGTMFDSEGGLRGAYSNIRGAGISGTREELTGLASRVMDPEALLQSN MTPGLRDWDLWGPLIFCLLLSLLLSFTARADQKDAVFSGVFAMIWLGEAIVTLQIKLLGGNISFAQSRRG* |
| Coding | >OphauB2|6251 ATGGCTTCTAGCACAAGAGATGACTATAATCAGCCACCGCTCGAGGATGACGATCTTATTGATCCTGACAATGCT ACCCTCGACGATCTCGACGATCCTCTTGGGAGAGAGCGACTAACAGGCAACATTGGCTCGACAGCGCCATCATCG AGACCTCTTAACGAAAGCTATCTAACGTCATCAATTCCTGGCGAGGACCGCAGGGCGGCGCAAAACACAATCGAC GAGACAGTATGGCAGACACTGCGACGGGACCTATTAGCCGTTTGGGCCAAGCTTCGTGAGGTCCTCTACCCTCGC TACCTGCTCGGTGGCACAATGTTCGACTCAGAGGGTGGTCTGCGCGGCGCTTATTCGAATATACGAGGCGCCGGT ATCTCAGGCACGCGCGAAGAGTTGACTGGGCTTGCCAGCCGCGTCATGGATCCAGAGGCGCTGCTACAGAGCAAC ATGACTCCGGGCTTGCGCGACTGGGACTTATGGGGCCCTCTCATATTCTGTCTGCTTTTAAGTCTGCTTCTCAGC TTTACTGCTCGGGCCGACCAGAAGGATGCTGTCTTCAGCGGCGTGTTTGCTATGATTTGGCTTGGTGAAGCCATC GTTACCTTACAAATTAAGCTCCTCGGGGGCAACATTTCATTTGCGCAGAGTCGGCGTGGTTAA |
| Transcript | >OphauB2|6251 ATGGCTTCTAGCACAAGAGATGACTATAATCAGCCACCGCTCGAGGATGACGATCTTATTGATCCTGACAATGCT ACCCTCGACGATCTCGACGATCCTCTTGGGAGAGAGCGACTAACAGGCAACATTGGCTCGACAGCGCCATCATCG AGACCTCTTAACGAAAGCTATCTAACGTCATCAATTCCTGGCGAGGACCGCAGGGCGGCGCAAAACACAATCGAC GAGACAGTATGGCAGACACTGCGACGGGACCTATTAGCCGTTTGGGCCAAGCTTCGTGAGGTCCTCTACCCTCGC TACCTGCTCGGTGGCACAATGTTCGACTCAGAGGGTGGTCTGCGCGGCGCTTATTCGAATATACGAGGCGCCGGT ATCTCAGGCACGCGCGAAGAGTTGACTGGGCTTGCCAGCCGCGTCATGGATCCAGAGGCGCTGCTACAGAGCAAC ATGACTCCGGGCTTGCGCGACTGGGACTTATGGGGCCCTCTCATATTCTGTCTGCTTTTAAGTCTGCTTCTCAGC TTTACTGCTCGGGCCGACCAGAAGGATGCTGTCTTCAGCGGCGTGTTTGCTATGATTTGGCTTGGTGAAGCCATC GTTACCTTACAAATTAAGCTCCTCGGGGGCAACATTTCATTTGCGCAGAGTCGGCGTGGTTAA |
| Gene | >OphauB2|6251 ATGGCTTCTAGCACAAGAGATGACTATAATCAGCCACCGCTCGAGGATGACGATCTTATTGATCCTGACAATGGT AGCAATAAACGCTGAACGAATTGGGTGCCGAGCTAACAAGTTACAGCTACCCTCGACGATCTCGACGATCCTCTT GGGAGAGAGCGACTAACAGGCAACATTGGCTCGACAGCGCCATCATCGAGACCTCTTAACGAAAGCTATCTAACG TCATCAATTCCTGGCGAGGACCGCAGGGCGGCGCAAAACACAATCGACGAGACAGTATGGCAGACACTGCGACGG GACCTATTAGCCGTTTGGGCCAAGCTTCGTGAGGTCCTCTACCCTCGCTACCTGCTCGGTGGCACAATGTTCGAC TCAGAGGGTGGTCTGCGCGGCGCTTATTCGAATATACGAGGCGCCGGTATCTCAGGCACGCGCGAAGAGTTGACT GGGCTTGCCAGCCGCGTCATGGATCCAGAGGCGCTGCTACAGAGCAACATGACTCCGGGCTTGCGCGACTGGGAC TTATGGGGCCCTCTCATATTCTGTCTGCTTTTAAGTCTGCTTCTCAGCTTTACTGCTCGGGCCGACCAGAAGGAT GCTGTCTTCAGCGGCGTGTTTGCTATGATTTGGCTTGGTGAAGCCATCGTTACCTTACAAATTAAGCTCCTCGGG GGCAACATGTGGGCTTCTACTTTTATTGCACTATGTTCAAAGCTAATCATATGATGCAGTTCATTTGCGCAGAGT GTATGTATTATTGGATACACTCTCTTCCCTCTTGTCTTGGCCGCCCTAATGTCAGCACTCAAACTTTACTGGATT GCACGCATTCCTATTTATCTCGTCCTTATAGGGTGGTCTCTAGCTGCTGGTGTTAGTATTTTGGGTGGCAGCGGC GTGGTTAA |