Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6237
Gene name
LocationContig_55:81919..82952
Strand-
Gene length (bp)1033
Transcript length (bp)966
Coding sequence length (bp)966
Protein length (aa) 322

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04909 Amidohydro_2 Amidohydrolase 3.0E-35 5 313

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q54LN9|ACMSD_DICDI 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Dictyostelium discoideum GN=acmsd PE=3 SV=1 70 277 1.0E-12
sp|P80402|DBD23_ASPOR 2,3-dihydroxybenzoate decarboxylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090005000447 PE=1 SV=2 48 312 9.0E-12
sp|Q8TDX5|ACMSD_HUMAN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Homo sapiens GN=ACMSD PE=1 SV=1 4 277 7.0E-11
sp|Q0II68|ACMSD_BOVIN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Bos taurus GN=ACMSD PE=2 SV=1 4 277 8.0E-11
sp|Q8R5M5|ACMSD_RAT 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Rattus norvegicus GN=Acmsd PE=1 SV=1 4 222 4.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q54LN9|ACMSD_DICDI 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Dictyostelium discoideum GN=acmsd PE=3 SV=1 70 277 1.0E-12
sp|P80402|DBD23_ASPOR 2,3-dihydroxybenzoate decarboxylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090005000447 PE=1 SV=2 48 312 9.0E-12
sp|Q8TDX5|ACMSD_HUMAN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Homo sapiens GN=ACMSD PE=1 SV=1 4 277 7.0E-11
sp|Q0II68|ACMSD_BOVIN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Bos taurus GN=ACMSD PE=2 SV=1 4 277 8.0E-11
sp|Q8R5M5|ACMSD_RAT 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Rattus norvegicus GN=Acmsd PE=1 SV=1 4 222 4.0E-09
sp|Q8R519|ACMSD_MOUSE 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Mus musculus GN=Acmsd PE=1 SV=2 4 277 6.0E-09
sp|P0CT50|SDC_TRIMF Salicylate decarboxylase OS=Trichosporon moniliiforme GN=sdc PE=1 SV=1 42 277 7.0E-07
[Show less]

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6237
MAKKIDVHHHIYPPEMTTVLKSAGGDPSGWGVPSWSLEADDEIAASIGVGTAIFSVTAPGASIIGDDASAAQFAS
RLNDYCAQIRDKDPMRYGFFCNLGSLLDTQRCLQEIGRAFDELGADGVVLFTRYGEDEVRYLGHDDFKPIWQELN
RRQAVVFVHPTHGLDTRLVNAHSPQPIFDYPHETTRAAADLIMSNNLREFPDCKIILSHAGGTLPFLIHRISMCE
DTQFATGKGREEIYEDARRFYFDLALSGDGRVLHHVMAFAKPGHVLFGSDYPNAPVASLTRDAEVIDGYDFGAQR
ASVYHGAATALFPRLAKAYKS*
Coding >OphauB2|6237
ATGGCCAAAAAGATTGACGTGCACCACCACATTTACCCCCCCGAGATGACGACTGTCCTCAAATCAGCAGGCGGC
GACCCTTCGGGCTGGGGCGTGCCCTCGTGGAGTCTGGAAGCCGACGATGAAATAGCCGCGAGCATTGGCGTCGGC
ACGGCCATTTTCTCCGTGACTGCCCCCGGCGCATCCATAATCGGCGACGACGCCTCGGCCGCGCAGTTTGCCTCA
CGGCTCAACGACTATTGCGCGCAGATTCGCGACAAGGATCCCATGCGCTACGGCTTCTTTTGCAATCTGGGGTCG
TTGCTGGACACGCAGCGATGCTTACAAGAGATTGGGCGAGCGTTTGACGAGCTCGGAGCAGATGGCGTCGTCTTG
TTTACGCGGTACGGAGAGGACGAGGTGCGCTATCTCGGACACGACGACTTCAAGCCCATTTGGCAAGAGTTGAAT
CGGCGGCAGGCGGTAGTCTTTGTCCATCCGACGCATGGGCTCGACACACGGCTAGTGAATGCGCACTCGCCGCAG
CCCATATTTGACTATCCGCATGAAACGACGCGGGCGGCGGCAGATTTAATAATGTCGAATAATCTGCGCGAGTTT
CCCGACTGCAAAATCATTCTCTCGCACGCAGGCGGGACGCTGCCGTTTCTGATTCATCGTATATCCATGTGTGAG
GATACGCAGTTTGCTACGGGCAAGGGCAGGGAGGAGATTTATGAGGACGCGCGTAGGTTTTACTTTGATTTGGCC
TTGTCGGGGGATGGGCGGGTGTTGCACCATGTCATGGCGTTTGCTAAGCCGGGACATGTCTTGTTTGGCAGCGAT
TATCCAAACGCGCCGGTGGCGAGTCTGACGAGGGATGCAGAGGTGATTGACGGGTATGATTTTGGGGCGCAACGG
GCGTCGGTGTATCATGGGGCGGCCACGGCCTTGTTTCCTAGACTAGCAAAGGCTTACAAGTCGTGA
Transcript >OphauB2|6237
ATGGCCAAAAAGATTGACGTGCACCACCACATTTACCCCCCCGAGATGACGACTGTCCTCAAATCAGCAGGCGGC
GACCCTTCGGGCTGGGGCGTGCCCTCGTGGAGTCTGGAAGCCGACGATGAAATAGCCGCGAGCATTGGCGTCGGC
ACGGCCATTTTCTCCGTGACTGCCCCCGGCGCATCCATAATCGGCGACGACGCCTCGGCCGCGCAGTTTGCCTCA
CGGCTCAACGACTATTGCGCGCAGATTCGCGACAAGGATCCCATGCGCTACGGCTTCTTTTGCAATCTGGGGTCG
TTGCTGGACACGCAGCGATGCTTACAAGAGATTGGGCGAGCGTTTGACGAGCTCGGAGCAGATGGCGTCGTCTTG
TTTACGCGGTACGGAGAGGACGAGGTGCGCTATCTCGGACACGACGACTTCAAGCCCATTTGGCAAGAGTTGAAT
CGGCGGCAGGCGGTAGTCTTTGTCCATCCGACGCATGGGCTCGACACACGGCTAGTGAATGCGCACTCGCCGCAG
CCCATATTTGACTATCCGCATGAAACGACGCGGGCGGCGGCAGATTTAATAATGTCGAATAATCTGCGCGAGTTT
CCCGACTGCAAAATCATTCTCTCGCACGCAGGCGGGACGCTGCCGTTTCTGATTCATCGTATATCCATGTGTGAG
GATACGCAGTTTGCTACGGGCAAGGGCAGGGAGGAGATTTATGAGGACGCGCGTAGGTTTTACTTTGATTTGGCC
TTGTCGGGGGATGGGCGGGTGTTGCACCATGTCATGGCGTTTGCTAAGCCGGGACATGTCTTGTTTGGCAGCGAT
TATCCAAACGCGCCGGTGGCGAGTCTGACGAGGGATGCAGAGGTGATTGACGGGTATGATTTTGGGGCGCAACGG
GCGTCGGTGTATCATGGGGCGGCCACGGCCTTGTTTCCTAGACTAGCAAAGGCTTACAAGTCGTGA
Gene >OphauB2|6237
ATGGCCAAAAAGATTGACGTGCACCACCACATTTACCCCCCCGAGATGACGACTGGTAAGCCTTGAGCACAACCC
GCAAACCCTGCAACCAGCACAGCAACTCACACTCGTCTCCTACGCAGTCCTCAAATCAGCAGGCGGCGACCCTTC
GGGCTGGGGCGTGCCCTCGTGGAGTCTGGAAGCCGACGATGAAATAGCCGCGAGCATTGGCGTCGGCACGGCCAT
TTTCTCCGTGACTGCCCCCGGCGCATCCATAATCGGCGACGACGCCTCGGCCGCGCAGTTTGCCTCACGGCTCAA
CGACTATTGCGCGCAGATTCGCGACAAGGATCCCATGCGCTACGGCTTCTTTTGCAATCTGGGGTCGTTGCTGGA
CACGCAGCGATGCTTACAAGAGATTGGGCGAGCGTTTGACGAGCTCGGAGCAGATGGCGTCGTCTTGTTTACGCG
GTACGGAGAGGACGAGGTGCGCTATCTCGGACACGACGACTTCAAGCCCATTTGGCAAGAGTTGAATCGGCGGCA
GGCGGTAGTCTTTGTCCATCCGACGCATGGGCTCGACACACGGCTAGTGAATGCGCACTCGCCGCAGCCCATATT
TGACTATCCGCATGAAACGACGCGGGCGGCGGCAGATTTAATAATGTCGAATAATCTGCGCGAGTTTCCCGACTG
CAAAATCATTCTCTCGCACGCAGGCGGGACGCTGCCGTTTCTGATTCATCGTATATCCATGTGTGAGGATACGCA
GTTTGCTACGGGCAAGGGCAGGGAGGAGATTTATGAGGACGCGCGTAGGTTTTACTTTGATTTGGCCTTGTCGGG
GGATGGGCGGGTGTTGCACCATGTCATGGCGTTTGCTAAGCCGGGACATGTCTTGTTTGGCAGCGATTATCCAAA
CGCGCCGGTGGCGAGTCTGACGAGGGATGCAGAGGTGATTGACGGGTATGATTTTGGGGCGCAACGGGCGTCGGT
GTATCATGGGGCGGCCACGGCCTTGTTTCCTAGACTAGCAAAGGCTTACAAGTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail