Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6221
Gene name
LocationContig_55:51583..52117
Strand+
Gene length (bp)534
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5BHG4|LBUA_EMENI Lactobacillus up-regulated protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=lbuA PE=1 SV=2 39 132 5.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6221
MNFKCLVLVALVGFSAAIQGENVNPIDLVKSNMHQDVDGYIHLGMDGVVRSVSHDKKILDYLPLSPEQISAFIDN
YPAHTPEQKDTLKAAFANVDGRVVSEDVMRNPPAHPEPATVEGQLAAPLSRWTLQCVYCIE*
Coding >OphauB2|6221
ATGAACTTCAAGTGCCTAGTCCTTGTTGCCCTTGTTGGCTTCTCTGCTGCTATTCAGGGAGAAAACGTAAACCCC
ATTGACCTTGTCAAGAGCAACATGCACCAAGATGTCGACGGATATATACACCTCGGCATGGACGGCGTGGTGCGC
TCCGTTTCGCATGATAAAAAGATTCTTGACTACCTGCCGCTCAGCCCAGAACAAATCAGTGCCTTTATCGACAAC
TATCCAGCACACACGCCAGAGCAAAAGGATACTCTCAAGGCAGCCTTTGCCAATGTCGACGGCCGCGTCGTTTCC
GAGGACGTCATGCGCAACCCGCCTGCCCATCCTGAACCAGCGACAGTCGAGGGCCAACTGGCGGCGCCCCTGTCG
CGATGGACCCTGCAGTGCGTGTATTGTATTGAATAG
Transcript >OphauB2|6221
ATGAACTTCAAGTGCCTAGTCCTTGTTGCCCTTGTTGGCTTCTCTGCTGCTATTCAGGGAGAAAACGTAAACCCC
ATTGACCTTGTCAAGAGCAACATGCACCAAGATGTCGACGGATATATACACCTCGGCATGGACGGCGTGGTGCGC
TCCGTTTCGCATGATAAAAAGATTCTTGACTACCTGCCGCTCAGCCCAGAACAAATCAGTGCCTTTATCGACAAC
TATCCAGCACACACGCCAGAGCAAAAGGATACTCTCAAGGCAGCCTTTGCCAATGTCGACGGCCGCGTCGTTTCC
GAGGACGTCATGCGCAACCCGCCTGCCCATCCTGAACCAGCGACAGTCGAGGGCCAACTGGCGGCGCCCCTGTCG
CGATGGACCCTGCAGTGCGTGTATTGTATTGAATAG
Gene >OphauB2|6221
ATGAACTTCAAGTGCCTAGTCCTTGTTGCCCTTGTTGGCTTCTCTGCTGCTATTCAGGTGCGTATTGGTTTTTCT
GTTTGAATGCTGTACAGATTATACTGCGTACTGACCAGTGACCCAGGGAGAAAACGTAAACCCCATTGACCTTGT
CAAGAGCAACATGCACCAAGATGTCGACGGATATATACACCTCGGCATGGACGGCGTGGTGCGCTCCGTTTCGCA
TGATAAAAAGATTCTTGACTACCTGCCGCTCAGCCCAGAACAAATCAGTGCCTTTATCGACAACTATCCAGCACA
CACGCCAGAGCAAAAGGATACTCTCAAGGCAGCCTTTGCCAATGTCGACGGCCGCGTCGTTTCCGAGGACGTCAT
GCGCAACCCGCCTGCCCATCCTGAACCAGCGACAGTCGAGGGCCAACTGGCGGCGCCCCTGTCGCGAGTGCGTAG
ATCAGGCTGCTTTCCTTCGACATGCAGCACCTTGTCAAATTGCTACCATAGTGGACCCTGCAGTGCGTGTATTGT
ATTGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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