Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|6204
Gene name
Location	Contig_55:11129..11785
Strand	+
Gene length (bp)	656
Transcript length (bp)	558
Coding sequence length (bp)	558
Protein length (aa)	186

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16015	Promethin	Promethin	1.4E-32	44	148

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 53	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	70	92	22
2	97	119	22
3	126	148	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|6204 MSTQDQQLREDMRTHQQQLRETACDLKNAVQDRAAGVRSMAQESFDRVVPPTSRRRAYDYSSALASQRPILFSFI LSQLVFCFLPLLLFAAFAASTVVLALGAAVVFSLFWIGLALLVLVPVLLVASSVALIVWVWAVASFLLARWLYAH APVGVSGGLQVDAAGRKFNVVKDERGIDSNIVHKS*
Coding	>OphauB2\|6204 ATGTCGACGCAGGACCAGCAGCTTAGAGAGGATATGCGCACGCATCAGCAGCAGCTGCGCGAAACGGCCTGCGAT CTCAAGAATGCGGTGCAGGATCGTGCAGCGGGGGTGCGGTCAATGGCGCAGGAGTCGTTTGACCGCGTGGTGCCG CCCACGTCGCGCCGTCGCGCATACGACTATTCGTCTGCTCTAGCATCGCAGCGGCCCATTCTCTTTTCTTTTATC CTCTCGCAGCTCGTCTTTTGCTTCCTCCCGCTTCTTCTCTTTGCCGCCTTTGCCGCCTCTACCGTTGTTCTCGCC CTCGGAGCGGCCGTCGTCTTTTCTCTCTTTTGGATTGGCCTCGCCCTGCTTGTCCTTGTGCCTGTTCTTCTCGTC GCCTCGTCCGTCGCCCTCATTGTTTGGGTCTGGGCCGTTGCCAGCTTCCTTCTTGCTCGCTGGCTCTACGCGCAT GCTCCCGTGGGCGTCAGTGGCGGTCTTCAGGTTGACGCCGCCGGCCGCAAGTTTAATGTCGTCAAGGATGAGCGC GGCATCGACAGCAACATTGTGCACAAGTCTTAG
Transcript	>OphauB2\|6204 ATGTCGACGCAGGACCAGCAGCTTAGAGAGGATATGCGCACGCATCAGCAGCAGCTGCGCGAAACGGCCTGCGAT CTCAAGAATGCGGTGCAGGATCGTGCAGCGGGGGTGCGGTCAATGGCGCAGGAGTCGTTTGACCGCGTGGTGCCG CCCACGTCGCGCCGTCGCGCATACGACTATTCGTCTGCTCTAGCATCGCAGCGGCCCATTCTCTTTTCTTTTATC CTCTCGCAGCTCGTCTTTTGCTTCCTCCCGCTTCTTCTCTTTGCCGCCTTTGCCGCCTCTACCGTTGTTCTCGCC CTCGGAGCGGCCGTCGTCTTTTCTCTCTTTTGGATTGGCCTCGCCCTGCTTGTCCTTGTGCCTGTTCTTCTCGTC GCCTCGTCCGTCGCCCTCATTGTTTGGGTCTGGGCCGTTGCCAGCTTCCTTCTTGCTCGCTGGCTCTACGCGCAT GCTCCCGTGGGCGTCAGTGGCGGTCTTCAGGTTGACGCCGCCGGCCGCAAGTTTAATGTCGTCAAGGATGAGCGC GGCATCGACAGCAACATTGTGCACAAGTCTTAG
Gene	>OphauB2\|6204 ATGTCGACGCAGGACCAGCAGCTTAGAGAGGATATGCGCACGCATCAGCAGCAGCTGCGCGAAACGGCCTGCGAT CTCAAGAATGCGGTGCAGGATCGTGCAGCGGGGGTGCGGTCAATGGCGCAGGAGTCGTTTGACCGCGTGGTGCCG CCCACGTCGCGCCGTCGCGCATACGACTATTCGTCTGCTCTAGCATCGCAGCGGCCCATTCTCTTTGTACGAGGC GCCCGCCCACACTTTTTTTTGGCCGTTGTTTTTTTTTTCTTCGCCTGGCGAGATATTTTGCACCCAGCTAATTAT ATTTCCAATTGTAGTCTTTTATCCTCTCGCAGCTCGTCTTTTGCTTCCTCCCGCTTCTTCTCTTTGCCGCCTTTG CCGCCTCTACCGTTGTTCTCGCCCTCGGAGCGGCCGTCGTCTTTTCTCTCTTTTGGATTGGCCTCGCCCTGCTTG TCCTTGTGCCTGTTCTTCTCGTCGCCTCGTCCGTCGCCCTCATTGTTTGGGTCTGGGCCGTTGCCAGCTTCCTTC TTGCTCGCTGGCTCTACGCGCATGCTCCCGTGGGCGTCAGTGGCGGTCTTCAGGTTGACGCCGCCGGCCGCAAGT TTAATGTCGTCAAGGATGAGCGCGGCATCGACAGCAACATTGTGCACAAGTCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail