© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6196 |
| Gene name | |
| Location | Contig_54:109538..112177 |
| Strand | - |
| Gene length (bp) | 2639 |
| Transcript length (bp) | 2454 |
| Coding sequence length (bp) | 2454 |
| Protein length (aa) | 818 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00732 | GMC_oxred_N | GMC oxidoreductase | 1.7E-44 | 296 | 565 |
| PF05199 | GMC_oxred_C | GMC oxidoreductase | 1.2E-29 | 646 | 803 |
| PF00890 | FAD_binding_2 | FAD binding domain | 3.5E-06 | 292 | 324 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5WWZ9|FAO2_LOTJA | Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1 | 285 | 817 | 9.0E-90 |
| sp|Q9LW56|FAO3_ARATH | Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana GN=FAO3 PE=1 SV=1 | 309 | 816 | 4.0E-77 |
| sp|Q94BP3|FAO4B_ARATH | Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2 | 190 | 813 | 6.0E-75 |
| sp|Q9ZWB9|FAO1_ARATH | Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1 PE=3 SV=2 | 309 | 806 | 4.0E-65 |
| sp|O65709|FAO4A_ARATH | Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2 | 309 | 813 | 2.0E-62 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5WWZ9|FAO2_LOTJA | Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1 | 285 | 817 | 9.0E-90 |
| sp|Q9LW56|FAO3_ARATH | Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana GN=FAO3 PE=1 SV=1 | 309 | 816 | 4.0E-77 |
| sp|Q94BP3|FAO4B_ARATH | Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B PE=2 SV=2 | 190 | 813 | 6.0E-75 |
| sp|Q9ZWB9|FAO1_ARATH | Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1 PE=3 SV=2 | 309 | 806 | 4.0E-65 |
| sp|O65709|FAO4A_ARATH | Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A PE=3 SV=2 | 309 | 813 | 2.0E-62 |
| sp|B5WWZ8|FAO1_LOTJA | Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=1 | 205 | 813 | 8.0E-62 |
| sp|P9WMV7|Y492_MYCTU | Uncharacterized GMC-type oxidoreductase Rv0492c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0492c PE=1 SV=1 | 292 | 802 | 2.0E-32 |
| sp|P9WMV6|Y492_MYCTO | Uncharacterized GMC-type oxidoreductase MT0511/MT0512 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0511/MT0512 PE=3 SV=1 | 292 | 802 | 2.0E-32 |
| sp|P55582|Y4NJ_RHISN | Uncharacterized GMC-type oxidoreductase y4nJ OS=Rhizobium sp. (strain NGR234) GN=NGR_a02320 PE=3 SV=1 | 288 | 810 | 3.0E-25 |
| sp|Q2MF66|LIVQ_STRLV | 6'''-hydroxyparomomycin C oxidase OS=Streptomyces lividus GN=livQ PE=1 SV=1 | 740 | 815 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6196 MDRGFRSENRDIWKEFERHYIGKYGIAALQHHGIAGIAGIAALQQLQALQHLQALQHHRASYDSKGPPKDKDGAA TMHLPPQDQPVATPMPEPPSKDFMSEEQWETLFALVDGCLPSLTTEGPDSGRLSVAAEQVDDIVEHISKGCKDGP SKEQVKAFLQARPSEDSRLRAECIRTLASMPQRARLGHALGMLGTRHGSLLLTGSWKRVTEQPVGAREAIVKSWS GSWLPSLRMLAKGIVAAAQKANSMTSPYFEQLSGYNNVPRNWKAGEGYKFDFIQLAAGSQVHEMTTDVVVIGSGC GGAVAAKNVAQAGLQVLVVDKGYHFPPSHLPMPQDAACAHLYDHCGIWLTDDASTNILSGSCWGGGGTVNWSVCF RLQDFVRREWAAQGLPLFESPDFDACMDRVWDFVGASTGGIRHNHRNQVMLDGCQKLGWKGRTVEQNTANKDHYC GQCHLGCGSAEKRGPTVAWLPAAAEAGADFMEGFNAERIIFADDGVTATGVEGVWTARDANGHMHTPPSCRTQRR VRIRAKKVVLAAGSIRSPVMLIKSGIDNANVGRNLHLHPCNIVTATYDEDARPWEGGIITSYSAEFENLDLEGHG VKLEPIVMVPYTLYATQPWLGGLDAKQLMLRYGNLASFIVLTRDRDSGRVYMDRRTGEPRIDYTPSDFDRDHTLE GVQAMAKICYVTGAKEIRAGLPCLEPWLPHDNGERQRRHIVGKDPEFTDPSFAAWLQRLRQVDNRPPETTFASAH QMGTCRMSSSPDTGVVDDRGAVWGTRNLFVADASVFPSASGVNPMLTVMSLADWISRCVIKELAAGN* |
| Coding | >OphauB2|6196 ATGGACCGTGGCTTCCGCTCTGAAAATAGGGATATTTGGAAGGAGTTTGAGCGTCACTACATAGGCAAATACGGC ATTGCGGCATTGCAGCATCACGGCATTGCAGGCATTGCAGGCATTGCAGCTTTACAGCAGTTACAGGCATTGCAG CATTTACAGGCGTTGCAGCATCACAGAGCATCGTACGACAGCAAAGGCCCCCCAAAGGACAAGGACGGAGCAGCC ACGATGCATCTACCGCCCCAAGACCAGCCAGTGGCCACGCCCATGCCCGAGCCTCCCAGCAAGGACTTCATGTCG GAGGAGCAGTGGGAGACGCTGTTTGCGCTGGTTGATGGCTGCCTGCCGTCCTTGACGACCGAGGGGCCCGACTCG GGCAGGCTGAGCGTGGCAGCGGAACAAGTGGACGACATTGTAGAGCACATTTCCAAAGGGTGCAAGGACGGGCCC AGCAAGGAGCAGGTCAAGGCGTTTCTGCAGGCCAGGCCGTCCGAGGACAGCAGGCTCCGGGCCGAGTGCATCCGG ACACTGGCGTCGATGCCGCAGAGGGCCAGGCTGGGGCATGCGCTGGGGATGCTGGGGACGCGGCACGGCAGCCTG CTGCTGACGGGATCGTGGAAACGGGTGACGGAGCAGCCGGTTGGCGCGCGCGAGGCCATTGTCAAGTCGTGGTCG GGGTCGTGGCTGCCCAGCCTGCGCATGCTGGCCAAGGGCATCGTGGCGGCGGCGCAAAAGGCCAACTCGATGACG AGCCCCTACTTTGAGCAGCTGTCGGGCTACAACAACGTGCCGCGCAACTGGAAGGCGGGCGAGGGCTACAAGTTT GACTTTATCCAGCTGGCGGCGGGCAGCCAGGTGCACGAGATGACGACGGACGTGGTGGTGATTGGGTCGGGCTGC GGCGGCGCCGTGGCGGCCAAGAATGTGGCCCAGGCTGGCCTCCAGGTGCTTGTTGTCGACAAGGGCTACCACTTC CCGCCCTCGCACCTGCCCATGCCCCAGGACGCCGCCTGCGCCCATCTCTACGACCACTGCGGCATCTGGCTGACC GACGACGCCAGCACCAACATCCTCAGCGGCAGCTGCTGGGGCGGCGGCGGCACTGTCAACTGGAGCGTCTGCTTC CGCCTACAAGACTTTGTGCGCCGCGAGTGGGCCGCCCAGGGCCTGCCGCTCTTTGAGTCGCCCGACTTTGACGCC TGCATGGACCGCGTCTGGGACTTTGTCGGCGCCAGCACCGGCGGCATCCGCCACAACCACCGCAACCAAGTCATG CTCGACGGATGCCAAAAGCTGGGCTGGAAGGGCCGCACCGTGGAGCAGAACACGGCCAACAAGGACCACTACTGC GGCCAGTGCCACTTGGGCTGCGGCTCAGCCGAGAAGCGCGGCCCCACGGTGGCCTGGCTGCCTGCTGCTGCCGAG GCGGGCGCCGATTTTATGGAGGGCTTCAACGCCGAGCGCATCATCTTTGCCGACGACGGCGTCACGGCAACCGGC GTCGAGGGCGTCTGGACGGCCCGCGATGCCAATGGCCACATGCACACGCCCCCCAGCTGCCGCACCCAGCGCCGC GTCCGCATCCGCGCCAAAAAGGTCGTCTTGGCCGCAGGCTCCATCCGGAGTCCCGTCATGCTCATCAAGAGCGGC ATCGACAATGCCAATGTGGGCCGCAACCTGCACCTGCACCCCTGCAACATCGTCACGGCTACCTATGACGAGGAC GCCCGCCCCTGGGAGGGCGGCATCATCACGAGCTACAGTGCCGAGTTTGAAAACCTCGACCTCGAGGGCCACGGC GTCAAGCTCGAGCCCATTGTCATGGTGCCCTACACCCTCTACGCCACCCAGCCCTGGCTCGGCGGCCTCGACGCC AAGCAGCTGATGCTGAGGTATGGCAACCTGGCCAGCTTCATTGTGCTAACCCGCGACCGCGACTCGGGCCGCGTC TACATGGACCGCAGGACGGGCGAGCCGCGCATCGACTACACCCCCTCCGACTTTGACCGCGACCACACACTCGAG GGCGTCCAGGCCATGGCCAAGATATGCTACGTCACAGGCGCCAAGGAGATACGCGCTGGCCTGCCGTGCCTCGAG CCGTGGCTTCCGCACGACAATGGAGAGCGGCAGAGGCGGCACATTGTGGGCAAAGACCCCGAGTTTACCGACCCC TCCTTTGCCGCCTGGCTGCAGCGCCTGCGCCAAGTGGACAATCGCCCGCCTGAAACCACGTTTGCATCTGCTCAC CAAATGGGCACCTGTCGCATGAGCTCCAGCCCAGACACGGGCGTCGTTGATGACCGAGGCGCCGTCTGGGGCACC CGCAACCTCTTTGTCGCTGATGCCAGTGTCTTTCCCAGTGCCAGTGGCGTCAATCCCATGTTGACCGTCATGTCT CTGGCCGACTGGATTTCGCGTTGCGTCATCAAGGAGCTCGCCGCTGGCAACTAG |
| Transcript | >OphauB2|6196 ATGGACCGTGGCTTCCGCTCTGAAAATAGGGATATTTGGAAGGAGTTTGAGCGTCACTACATAGGCAAATACGGC ATTGCGGCATTGCAGCATCACGGCATTGCAGGCATTGCAGGCATTGCAGCTTTACAGCAGTTACAGGCATTGCAG CATTTACAGGCGTTGCAGCATCACAGAGCATCGTACGACAGCAAAGGCCCCCCAAAGGACAAGGACGGAGCAGCC ACGATGCATCTACCGCCCCAAGACCAGCCAGTGGCCACGCCCATGCCCGAGCCTCCCAGCAAGGACTTCATGTCG GAGGAGCAGTGGGAGACGCTGTTTGCGCTGGTTGATGGCTGCCTGCCGTCCTTGACGACCGAGGGGCCCGACTCG GGCAGGCTGAGCGTGGCAGCGGAACAAGTGGACGACATTGTAGAGCACATTTCCAAAGGGTGCAAGGACGGGCCC AGCAAGGAGCAGGTCAAGGCGTTTCTGCAGGCCAGGCCGTCCGAGGACAGCAGGCTCCGGGCCGAGTGCATCCGG ACACTGGCGTCGATGCCGCAGAGGGCCAGGCTGGGGCATGCGCTGGGGATGCTGGGGACGCGGCACGGCAGCCTG CTGCTGACGGGATCGTGGAAACGGGTGACGGAGCAGCCGGTTGGCGCGCGCGAGGCCATTGTCAAGTCGTGGTCG GGGTCGTGGCTGCCCAGCCTGCGCATGCTGGCCAAGGGCATCGTGGCGGCGGCGCAAAAGGCCAACTCGATGACG AGCCCCTACTTTGAGCAGCTGTCGGGCTACAACAACGTGCCGCGCAACTGGAAGGCGGGCGAGGGCTACAAGTTT GACTTTATCCAGCTGGCGGCGGGCAGCCAGGTGCACGAGATGACGACGGACGTGGTGGTGATTGGGTCGGGCTGC GGCGGCGCCGTGGCGGCCAAGAATGTGGCCCAGGCTGGCCTCCAGGTGCTTGTTGTCGACAAGGGCTACCACTTC CCGCCCTCGCACCTGCCCATGCCCCAGGACGCCGCCTGCGCCCATCTCTACGACCACTGCGGCATCTGGCTGACC GACGACGCCAGCACCAACATCCTCAGCGGCAGCTGCTGGGGCGGCGGCGGCACTGTCAACTGGAGCGTCTGCTTC CGCCTACAAGACTTTGTGCGCCGCGAGTGGGCCGCCCAGGGCCTGCCGCTCTTTGAGTCGCCCGACTTTGACGCC TGCATGGACCGCGTCTGGGACTTTGTCGGCGCCAGCACCGGCGGCATCCGCCACAACCACCGCAACCAAGTCATG CTCGACGGATGCCAAAAGCTGGGCTGGAAGGGCCGCACCGTGGAGCAGAACACGGCCAACAAGGACCACTACTGC GGCCAGTGCCACTTGGGCTGCGGCTCAGCCGAGAAGCGCGGCCCCACGGTGGCCTGGCTGCCTGCTGCTGCCGAG GCGGGCGCCGATTTTATGGAGGGCTTCAACGCCGAGCGCATCATCTTTGCCGACGACGGCGTCACGGCAACCGGC GTCGAGGGCGTCTGGACGGCCCGCGATGCCAATGGCCACATGCACACGCCCCCCAGCTGCCGCACCCAGCGCCGC GTCCGCATCCGCGCCAAAAAGGTCGTCTTGGCCGCAGGCTCCATCCGGAGTCCCGTCATGCTCATCAAGAGCGGC ATCGACAATGCCAATGTGGGCCGCAACCTGCACCTGCACCCCTGCAACATCGTCACGGCTACCTATGACGAGGAC GCCCGCCCCTGGGAGGGCGGCATCATCACGAGCTACAGTGCCGAGTTTGAAAACCTCGACCTCGAGGGCCACGGC GTCAAGCTCGAGCCCATTGTCATGGTGCCCTACACCCTCTACGCCACCCAGCCCTGGCTCGGCGGCCTCGACGCC AAGCAGCTGATGCTGAGGTATGGCAACCTGGCCAGCTTCATTGTGCTAACCCGCGACCGCGACTCGGGCCGCGTC TACATGGACCGCAGGACGGGCGAGCCGCGCATCGACTACACCCCCTCCGACTTTGACCGCGACCACACACTCGAG GGCGTCCAGGCCATGGCCAAGATATGCTACGTCACAGGCGCCAAGGAGATACGCGCTGGCCTGCCGTGCCTCGAG CCGTGGCTTCCGCACGACAATGGAGAGCGGCAGAGGCGGCACATTGTGGGCAAAGACCCCGAGTTTACCGACCCC TCCTTTGCCGCCTGGCTGCAGCGCCTGCGCCAAGTGGACAATCGCCCGCCTGAAACCACGTTTGCATCTGCTCAC CAAATGGGCACCTGTCGCATGAGCTCCAGCCCAGACACGGGCGTCGTTGATGACCGAGGCGCCGTCTGGGGCACC CGCAACCTCTTTGTCGCTGATGCCAGTGTCTTTCCCAGTGCCAGTGGCGTCAATCCCATGTTGACCGTCATGTCT CTGGCCGACTGGATTTCGCGTTGCGTCATCAAGGAGCTCGCCGCTGGCAACTAG |
| Gene | >OphauB2|6196 ATGGACCGTGGCTTCCGCTCTGAAAATAGGGATATTTGGAAGGGTGAGTGGTAGTACCTTTGGGCTTGGTGGGCA AGGGCTTGGAAAGGCAGAGGGAGCGAGGCGCAGAGTTTGAGCGTCACTACATAGGCAAATACGGCATTGCGGCAT TGCAGCATCACGGCATTGCAGGCATTGCAGGCATTGCAGCTTTACAGGTATTACAGCAGTTACAGGCATTGCAGC ATTTACAGGCATTGCAGCATTTACAGGCATTGCAGCAGTTACAGGCATTGCAGCATTTACAGGCGTTGCAGCATC ACAGAGCATCGTACGACAGCAAAGGCCCCCCAAAGGACAAGGACGGAGCAGCCACGATGCATCTACCGCCCCAAG ACCAGCCAGTGGCCACGCCCATGCCCGAGCCTCCCAGCAAGGACTTCATGTCGGAGGAGCAGTGGGAGACGCTGT TTGCGCTGGTTGATGGCTGCCTGCCGTCCTTGACGACCGAGGGGCCCGACTCGGGCAGGCTGAGCGTGGCAGCGG AACAAGTGGACGACATTGTAGAGCACATTTCCAAAGGGTGCAAGGACGGGCCCAGCAAGGAGCAGGTCAAGGCGT TTCTGCAGGCCAGGCCGTCCGAGGACAGCAGGCTCCGGGCCGAGTGCATCCGGACACTGGCGTCGATGCCGCAGA GGGCCAGGCTGGGGCATGCGCTGGGGATGCTGGGGACGCGGCACGGCAGCCTGCTGCTGACGGGATCGTGGAAAC GGGTGACGGAGCAGCCGGTTGGCGCGCGCGAGGCCATTGTCAAGTCGTGGTCGGGGTCGTGGCTGCCCAGCCTGC GCATGCTGGCCAAGGGCATCGTGGCGGCGGCGCAAAAGGCCAACTCGATGACGAGCCCCTACTTTGAGCAGCTGT CGGGCTACAACAACGTGCCGCGCAACTGGAAGGCGGGCGAGGGCTACAAGTTTGACTTTATCCAGCTGGCGGCGG GCAGCCAGGTGCACGAGATGACGACGGACGTGGTGGTGATTGGGTCGGGCTGCGGCGGCGCCGTGGCGGCCAAGA ATGTGGCCCAGGCTGGCCTCCAGGTGCTTGTTGTCGACAAGGGCTACCACTTCCCGCCCTCGCACCTGCCCATGC CCCAGGACGCCGCCTGCGCCCATCTCTACGACCACTGCGGCATCTGGCTGACCGACGACGCCAGCACCAACATCC TCAGCGGCAGCTGCTGGGGCGGCGGCGGCACTGTCAACTGGAGCGTCTGCTTCCGCCTACAAGACTTTGTGCGCC GCGAGTGGGCCGCCCAGGGCCTGCCGCTCTTTGAGTCGCCCGACTTTGACGCCTGCATGGACCGCGTCTGGGACT TTGTCGGCGCCAGCACCGGCGGCATCCGCCACAACCACCGCAACCAAGTCATGCTCGACGGATGCCAAAAGCTGG GCTGGAAGGGCCGCACCGTGGAGCAGAACACGGCCAACAAGGACCACTACTGCGGCCAGTGCCACTTGGGCTGCG GCTCAGCCGAGAAGCGCGGCCCCACGGTGGCCTGGCTGCCTGCTGCTGCCGAGGCGGGCGCCGATTTTATGGAGG GCTTCAACGCCGAGCGCATCATCTTTGCCGACGACGGCGTCACGGCAACCGGCGTCGAGGGCGTCTGGACGGCCC GCGATGCCAATGGCCACATGCACACGCCCCCCAGCTGCCGCACCCAGCGCCGCGTCCGCATCCGCGCCAAAAAGG TCGTCTTGGCCGCAGGCTCCATCCGGAGTCCCGTCATGCTCATCAAGAGCGGCATCGACAATGCCAATGTGGGCC GCAACCTGCACCTGCACCCCTGCAACATCGTCACGGCTACCTATGACGAGGACGCCCGCCCCTGGGAGGGCGGCA TCATCACGAGCTACAGTGCCGAGTTTGAAAACCTCGACCTCGAGGGCCACGGCGTCAAGCTCGAGCCCATTGTCA TGGTGGTATGGCCGCTTGTGTCTCTTGTCTGCTGCTCGCCGCTAACAAGACTGCCCCTCTAGCCCTACACCCTCT ACGCCACCCAGCCCTGGCTCGGCGGCCTCGACGCCAAGCAGCTGATGCTGAGGTATGGCAACCTGGCCAGCTTCA TTGTGCTAACCCGCGACCGCGACTCGGGCCGCGTCTACATGGACCGCAGGACGGGCGAGCCGCGCATCGACTACA CCCCCTCCGACTTTGACCGCGACCACACACTCGAGGGCGTCCAGGCCATGGCCAAGATATGCTACGTCACAGGCG CCAAGGAGATACGCGCTGGCCTGCCGTGCCTCGAGCCGTGGCTTCCGCACGACAATGGAGAGCGGCAGAGGCGGC ACATTGTGGGCAAAGACCCCGAGTTTACCGACCCCTCCTTTGCCGCCTGGCTGCAGCGCCTGCGCCAAGTGGACA ATCGCCCGCCTGAAACCACGTTTGCATCTGCTCACCAAATGGGCACCTGTCGCATGAGCTCCAGCCCAGACACGG GCGTCGTTGATGACCGAGGCGCCGTCTGGGGCACCCGCAACCTCTTTGTCGCTGATGCCAGTGTCTTTCCCAGTG CCAGTGGCGTCAATCCCATGTTGACCGTCATGTCTCTGGCCGACTGGATTTCGCGTTGCGTCATCAAGGAGCTCG CCGCTGGCAACTAG |