Protein ID | OphauB2|618 |
Gene name | |
Location | Contig_11:278970..280782 |
Strand | + |
Gene length (bp) | 1812 |
Transcript length (bp) | 1626 |
Coding sequence length (bp) | 1626 |
Protein length (aa) | 542 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 63 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 54 | 76 | 22 |
3 | 91 | 113 | 22 |
4 | 153 | 175 | 22 |
5 | 206 | 228 | 22 |
6 | 240 | 262 | 22 |
7 | 272 | 294 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|618 MGTEFGLDSDTKPELRLDGIGVFWLVYAIVWTLVLSAGMFFLWTRRDHPILRIRGLPLSFAAVLFMHCYWLAVQL AYIYGPLMPEVAELWIMSIWYPFGFALFHAANSRFLYIADAQKKYVDRSVDNGWDRARPRIRKTLVARWRMLDYS YKMLIVVSLGLGFQFLLTLIMFLMSRKFHSSFGIPGTEVHGNYMERKIQQGRGWEWWPSVVFQLFWAWVFAPIIL WRARKLRDTQGWRTQTICCCIASLHAVPMWLIALYVPEMAPVNKYFIPPQWIAVSITMIEIFTIFIPCWEVRKQQ SLCQETLDSIARWEMRQKTNTQGDKSLKSGSSATSSWIGRGKPSSITSSGNGSILTMDALEHTLAKNPEPLQHFS ALRDFSGENIAFLTRIREWRAAYIVAPSAGKGEKEEAEAPSRECFESALRIYMDFISSNSAEFQVNLSSQDFKSL QAVFEPAARIIYGENSTPDPATPFDDMPRRNDDEDSTETARYWGEVPDVFTDSVFDDAEMSIKYLVLTNTWPKFI RERRSTDGSSTAESGR* |
Coding | >OphauB2|618 ATGGGTACCGAATTCGGTCTCGACTCGGACACCAAGCCTGAGCTCCGGCTCGACGGCATCGGCGTCTTCTGGCTC GTCTACGCCATTGTCTGGACGCTGGTGCTCAGCGCCGGCATGTTCTTCCTCTGGACGCGCCGCGACCACCCCATC CTCCGCATCCGCGGCCTGCCCCTGTCCTTTGCTGCCGTGCTCTTCATGCACTGCTACTGGCTGGCCGTGCAGCTG GCTTACATCTATGGCCCCCTCATGCCCGAGGTGGCGGAGCTGTGGATCATGAGCATCTGGTATCCCTTTGGCTTT GCCCTCTTCCACGCCGCCAACAGCCGCTTCCTCTATATTGCCGACGCGCAAAAGAAGTATGTCGACCGGTCCGTC GACAATGGCTGGGACCGAGCCAGGCCGCGTATCCGCAAGACACTGGTGGCGCGCTGGCGCATGCTCGACTACAGC TACAAGATGCTCATTGTCGTCAGCCTGGGCTTGGGCTTCCAGTTCCTCTTGACCCTCATCATGTTTCTCATGTCG CGCAAGTTTCACTCGTCGTTTGGTATTCCAGGAACCGAGGTCCATGGCAACTACATGGAGCGCAAGATTCAGCAG GGTCGAGGCTGGGAATGGTGGCCATCAGTCGTCTTCCAGCTCTTTTGGGCCTGGGTCTTTGCCCCTATTATCCTC TGGCGCGCTCGCAAGCTCCGTGACACTCAGGGATGGAGGACCCAGACCATTTGCTGCTGCATCGCCAGTCTTCAC GCTGTGCCCATGTGGCTCATTGCGCTCTACGTGCCCGAGATGGCCCCCGTCAACAAGTACTTTATCCCTCCTCAG TGGATTGCCGTGTCCATCACCATGATTGAAATCTTCACCATCTTCATCCCCTGCTGGGAGGTGCGCAAGCAGCAG TCCCTCTGCCAAGAGACTCTCGACTCGATTGCCCGCTGGGAGATGCGCCAAAAGACCAACACGCAGGGCGACAAG TCCCTCAAGTCTGGCTCGTCAGCCACGTCGTCTTGGATCGGCCGCGGCAAGCCCTCGTCCATTACCAGCTCCGGC AACGGCAGCATCCTCACCATGGACGCCCTCGAGCACACTCTGGCCAAGAACCCCGAGCCGCTGCAGCACTTTTCC GCCTTGCGTGACTTTTCGGGCGAGAACATTGCCTTTTTGACCCGTATCCGCGAATGGCGCGCCGCCTACATCGTT GCCCCCTCGGCGGGCAAAGGGGAAAAGGAGGAAGCCGAGGCGCCGTCGCGCGAGTGCTTTGAGAGCGCGCTGCGC ATCTACATGGACTTTATCAGCAGTAACAGCGCCGAGTTTCAGGTCAACCTCTCCTCACAAGACTTTAAGAGCCTG CAGGCCGTCTTTGAGCCGGCTGCCCGTATTATTTATGGCGAAAACTCGACGCCCGATCCGGCGACGCCCTTTGAC GATATGCCGCGCCGAAACGACGACGAAGACTCGACTGAGACGGCCCGTTACTGGGGCGAGGTGCCCGACGTCTTT ACCGACTCCGTCTTTGACGATGCCGAGATGAGTATCAAGTATCTCGTCTTGACGAATACTTGGCCCAAGTTTATT CGCGAGCGGCGCTCAACCGACGGCTCCAGCACGGCCGAGTCGGGCAGATGA |
Transcript | >OphauB2|618 ATGGGTACCGAATTCGGTCTCGACTCGGACACCAAGCCTGAGCTCCGGCTCGACGGCATCGGCGTCTTCTGGCTC GTCTACGCCATTGTCTGGACGCTGGTGCTCAGCGCCGGCATGTTCTTCCTCTGGACGCGCCGCGACCACCCCATC CTCCGCATCCGCGGCCTGCCCCTGTCCTTTGCTGCCGTGCTCTTCATGCACTGCTACTGGCTGGCCGTGCAGCTG GCTTACATCTATGGCCCCCTCATGCCCGAGGTGGCGGAGCTGTGGATCATGAGCATCTGGTATCCCTTTGGCTTT GCCCTCTTCCACGCCGCCAACAGCCGCTTCCTCTATATTGCCGACGCGCAAAAGAAGTATGTCGACCGGTCCGTC GACAATGGCTGGGACCGAGCCAGGCCGCGTATCCGCAAGACACTGGTGGCGCGCTGGCGCATGCTCGACTACAGC TACAAGATGCTCATTGTCGTCAGCCTGGGCTTGGGCTTCCAGTTCCTCTTGACCCTCATCATGTTTCTCATGTCG CGCAAGTTTCACTCGTCGTTTGGTATTCCAGGAACCGAGGTCCATGGCAACTACATGGAGCGCAAGATTCAGCAG GGTCGAGGCTGGGAATGGTGGCCATCAGTCGTCTTCCAGCTCTTTTGGGCCTGGGTCTTTGCCCCTATTATCCTC TGGCGCGCTCGCAAGCTCCGTGACACTCAGGGATGGAGGACCCAGACCATTTGCTGCTGCATCGCCAGTCTTCAC GCTGTGCCCATGTGGCTCATTGCGCTCTACGTGCCCGAGATGGCCCCCGTCAACAAGTACTTTATCCCTCCTCAG TGGATTGCCGTGTCCATCACCATGATTGAAATCTTCACCATCTTCATCCCCTGCTGGGAGGTGCGCAAGCAGCAG TCCCTCTGCCAAGAGACTCTCGACTCGATTGCCCGCTGGGAGATGCGCCAAAAGACCAACACGCAGGGCGACAAG TCCCTCAAGTCTGGCTCGTCAGCCACGTCGTCTTGGATCGGCCGCGGCAAGCCCTCGTCCATTACCAGCTCCGGC AACGGCAGCATCCTCACCATGGACGCCCTCGAGCACACTCTGGCCAAGAACCCCGAGCCGCTGCAGCACTTTTCC GCCTTGCGTGACTTTTCGGGCGAGAACATTGCCTTTTTGACCCGTATCCGCGAATGGCGCGCCGCCTACATCGTT GCCCCCTCGGCGGGCAAAGGGGAAAAGGAGGAAGCCGAGGCGCCGTCGCGCGAGTGCTTTGAGAGCGCGCTGCGC ATCTACATGGACTTTATCAGCAGTAACAGCGCCGAGTTTCAGGTCAACCTCTCCTCACAAGACTTTAAGAGCCTG CAGGCCGTCTTTGAGCCGGCTGCCCGTATTATTTATGGCGAAAACTCGACGCCCGATCCGGCGACGCCCTTTGAC GATATGCCGCGCCGAAACGACGACGAAGACTCGACTGAGACGGCCCGTTACTGGGGCGAGGTGCCCGACGTCTTT ACCGACTCCGTCTTTGACGATGCCGAGATGAGTATCAAGTATCTCGTCTTGACGAATACTTGGCCCAAGTTTATT CGCGAGCGGCGCTCAACCGACGGCTCCAGCACGGCCGAGTCGGGCAGATGA |
Gene | >OphauB2|618 ATGGGTACCGAATTCGGTCTCGACTCGGACACCAAGCCTGAGCTCCGGCTCGACGGCATCGGCGTCTTCTGGCTC GTCTACGCCATTGTCTGGACGCTGGTGCTCAGCGCCGGCATGTTCTTCCTCTGGACGCGCCGCGACCACCCCATC CTCCGCATCCGCGGCCTGCCCCTGTCCTTTGCTGCCGTGCTCTTCATGCACTGCTACTGGCTGGCCGTGCAGCTG GCTTACATCTATGGCCCCCTCATGCCCGAGGTGGCGGAGCTGTGGATCATGAGCATCTGGTATCCCTTTGGCTTT GCCCTCTTCCACGCCGCCAACAGCCGCTTCCTCTATATTGCCGACGCGCAAAAGAAGTATGTCGACCGGTCCGTC GACAATGGCTGGGACCGAGCCAGGCCGCGTATCCGCAAGACACTGGTGGCGCGCTGGCGCATGCTCGACTACAGC TACAAGATGCTCATTGTCGTCAGCCTGGGCTTGGGCTTCCAGTTCCTCTTGACCCTCATCATGTTTCTCATGTCG CGCAAGTTTCACTCGTCGTTTGGTATTCCAGGAACCGAGGTCCATGGCAACTACATGGAGCGCAAGATTCAGCAG GGTCGAGGCTGGGAATGGTGCGTCTTTGTTCCTGCAAGGGGGAGGAGCGCTTAGGAGTATGGGCTGACCTTTTAT CTAGGTGGCCATCAGTCGTCTTCCAGCTCTTTTGGGCCTGGGTCTTTGCCCCTATTATCCTCTGGCGCGCTCGCA AGCTCCGTGACACTCAGGGATGGAGGACCCAGACCATTTGCTGCTGCATCGCCAGGTAGGCTTCTCGCCTAGTCA AGGACGAGGACAGTGTGCTAACACATGCCTGCTCTAGTCTTCACGCTGTGCCCATGTGGCTCATTGCGCTCTACG TGCCCGAGATGGCCCCCGTCAACAAGTACTTTATCCCTCCTCAGTGGTGAGTCGCCTCCCCCCTTGTGTGCTGTC GATTCATGTTGCACGGCCTCTAACCTGGCCCGTCTCAGGATTGCCGTGTCCATCACCATGATTGAAATCTTCACC ATCTTCATCCCCTGCTGGGAGGTGCGCAAGCAGCAGTCCCTCTGCCAAGAGACTCTCGACTCGATTGCCCGCTGG GAGATGCGCCAAAAGACCAACACGCAGGGCGACAAGTCCCTCAAGTCTGGCTCGTCAGCCACGTCGTCTTGGATC GGCCGCGGCAAGCCCTCGTCCATTACCAGCTCCGGCAACGGCAGCATCCTCACCATGGACGCCCTCGAGCACACT CTGGCCAAGAACCCCGAGCCGCTGCAGCACTTTTCCGCCTTGCGTGACTTTTCGGGCGAGAACATTGCCTTTTTG ACCCGTATCCGCGAATGGCGCGCCGCCTACATCGTTGCCCCCTCGGCGGGCAAAGGGGAAAAGGAGGAAGCCGAG GCGCCGTCGCGCGAGTGCTTTGAGAGCGCGCTGCGCATCTACATGGACTTTATCAGCAGTAACAGCGCCGAGTTT CAGGTCAACCTCTCCTCACAAGACTTTAAGAGCCTGCAGGCCGTCTTTGAGCCGGCTGCCCGTATTATTTATGGC GAAAACTCGACGCCCGATCCGGCGACGCCCTTTGACGATATGCCGCGCCGAAACGACGACGAAGACTCGACTGAG ACGGCCCGTTACTGGGGCGAGGTGCCCGACGTCTTTACCGACTCCGTCTTTGACGATGCCGAGATGAGTATCAAG TATCTCGTCTTGACGAATACTTGGCCCAAGTTTATTCGCGAGCGGCGCTCAACCGACGGCTCCAGCACGGCCGAG TCGGGCAGATGA |