Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6171
Gene name
LocationContig_54:41894..43585
Strand+
Gene length (bp)1691
Transcript length (bp)1572
Coding sequence length (bp)1572
Protein length (aa) 524

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04882 Peroxin-3 Peroxin-3 9.8E-166 7 463

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q874C0|PEX3_YARLI Peroxisomal biogenesis factor 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX3 PE=3 SV=1 8 465 3.0E-67
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 OS=Pichia angusta GN=PEX3 PE=3 SV=1 1 463 4.0E-51
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 OS=Komagataella pastoris GN=PEX3 PE=1 SV=1 1 463 2.0E-41
sp|Q6BK00|PEX3_DEBHA Peroxisomal biogenesis factor 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX3 PE=3 SV=1 1 466 2.0E-36
sp|P28795|PEX3_YEAST Peroxisomal biogenesis factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX3 PE=1 SV=1 21 463 1.0E-24
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Swissprot ID Swissprot Description Start End E-value
sp|Q874C0|PEX3_YARLI Peroxisomal biogenesis factor 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX3 PE=3 SV=1 8 465 3.0E-67
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 OS=Pichia angusta GN=PEX3 PE=3 SV=1 1 463 4.0E-51
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 OS=Komagataella pastoris GN=PEX3 PE=1 SV=1 1 463 2.0E-41
sp|Q6BK00|PEX3_DEBHA Peroxisomal biogenesis factor 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PEX3 PE=3 SV=1 1 466 2.0E-36
sp|P28795|PEX3_YEAST Peroxisomal biogenesis factor 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX3 PE=1 SV=1 21 463 1.0E-24
sp|O94227|PEX3_KLULA Peroxisomal biogenesis factor 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PEX3 PE=3 SV=1 17 463 1.0E-23
sp|Q759H4|PEX3_ASHGO Peroxisomal biogenesis factor 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX3 PE=3 SV=1 41 463 3.0E-23
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 OS=Macaca fascicularis GN=PEX3 PE=2 SV=1 171 463 1.0E-17
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1 171 463 2.0E-17
sp|A6H7C2|PEX3_BOVIN Peroxisomal biogenesis factor 3 OS=Bos taurus GN=PEX3 PE=2 SV=1 166 463 2.0E-17
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus GN=PEX3 PE=2 SV=1 171 463 4.0E-17
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 OS=Rattus norvegicus GN=Pex3 PE=1 SV=1 171 463 1.0E-16
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 OS=Mus musculus GN=Pex3 PE=1 SV=1 171 463 3.0E-16
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 OS=Macaca fascicularis GN=PEX3 PE=2 SV=1 1 90 2.0E-07
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 OS=Homo sapiens GN=PEX3 PE=1 SV=1 1 90 2.0E-07
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 OS=Rattus norvegicus GN=Pex3 PE=1 SV=1 1 90 2.0E-07
sp|Q54U86|PEX3_DICDI Peroxisome biogenesis factor 3 OS=Dictyostelium discoideum GN=pex3 PE=3 SV=1 171 384 3.0E-07
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 OS=Mus musculus GN=Pex3 PE=1 SV=1 1 90 4.0E-07
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus GN=PEX3 PE=2 SV=1 1 90 5.0E-07
sp|Q8S9K7|PEX32_ARATH Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana GN=PEX3-2 PE=2 SV=1 171 463 9.0E-07
sp|A6H7C2|PEX3_BOVIN Peroxisomal biogenesis factor 3 OS=Bos taurus GN=PEX3 PE=2 SV=1 10 90 1.0E-06
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GO

GO Term Description Terminal node
GO:0005779 integral component of peroxisomal membrane Yes
GO:0007031 peroxisome organization Yes
GO:0110165 cellular anatomical entity No
GO:0071840 cellular component organization or biogenesis No
GO:0009987 cellular process No
GO:0008150 biological_process No
GO:0006996 organelle organization No
GO:0016043 cellular component organization No
GO:0031224 intrinsic component of membrane No
GO:0031301 integral component of organelle membrane No
GO:0005575 cellular_component No
GO:0016021 integral component of membrane No
GO:0031231 intrinsic component of peroxisomal membrane No
GO:0031300 intrinsic component of organelle membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 178 200 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6171
MLSSVRRWLRNNSTPIAIGVGVVGAGYAVSQYVLSKLNDARERMSSERIAKENLRRRFEQNQEDCTFTVLALLPT
ATTNILAALNTEQITYEIQQIKSSAKASKLDAGDSASPPSIADTTMTDEDGKSLASMHSDSGIHASQIAVPSSSS
FAASGPLGQQDGGAQRTRKTKRQLWDDLAISAVTRAFTLIYTLSLLTMLTRIQLNLLGRRSYLSSVVALATGAQQ
GTINLENKDDDNQEQDYGSDFDTNRKYLTFSWWLLNQGWIHVMERVERAVRSVFGNLSPRDLISLDRFSKLTMDV
RRLVEGSTVEERRGSKWLEVLLPPKEREDEVIRESGILEDNSAQGGASLEQSSAALRRLLDETADLIESPLFCHV
LTLSLDAAFSLLVDSKLATEAFGISPRTHLVEPDSSDVGRTKVILLPKILSVLTRQAHVIGNGMPNEYLDEIEAV
RAIEGFAAVVYSSNWENEMRDEGLMDDAVHVGSSAHVGGSGLYEERQSEQSIVVVDSPSGMQSAWERAVDKRT*
Coding >OphauB2|6171
ATGTTGTCCTCGGTCCGACGTTGGCTGCGCAACAACTCGACGCCCATTGCCATTGGCGTGGGCGTCGTGGGCGCA
GGCTATGCCGTATCGCAATATGTTCTGTCCAAGCTCAATGACGCGCGTGAGCGCATGAGCAGTGAGCGCATCGCC
AAGGAAAACTTGCGCCGACGCTTTGAACAGAACCAAGAAGACTGCACTTTTACCGTTCTCGCCCTCCTTCCCACC
GCGACAACAAACATTCTAGCTGCTCTGAATACAGAGCAAATCACATACGAGATTCAACAAATCAAAAGCTCAGCC
AAGGCCTCCAAACTCGACGCTGGCGACTCAGCGAGCCCGCCAAGCATCGCCGACACCACCATGACGGACGAGGAC
GGAAAGAGCCTGGCCAGTATGCACAGCGACAGTGGCATTCACGCCAGTCAAATCGCTGTGCCATCGTCATCGTCA
TTCGCTGCCTCTGGGCCTCTGGGCCAGCAAGACGGCGGTGCGCAGAGGACGCGCAAGACCAAGAGGCAGCTATGG
GACGACCTGGCCATTAGCGCCGTTACAAGAGCCTTTACCCTAATCTACACCCTCTCCCTTCTCACCATGCTGACC
CGGATCCAGCTCAACCTGCTGGGCCGTCGGAGCTACCTTTCGAGCGTTGTTGCTCTCGCAACCGGCGCACAACAA
GGCACCATCAACCTGGAAAACAAGGATGACGACAACCAAGAGCAAGACTATGGCAGTGACTTCGACACAAACCGC
AAGTATTTGACGTTTAGCTGGTGGCTGCTCAACCAGGGCTGGATTCATGTAATGGAGCGTGTCGAGCGTGCCGTG
CGAAGCGTTTTTGGAAACTTGAGCCCCCGAGATCTCATCAGTCTCGACAGGTTTTCCAAGCTGACAATGGATGTG
AGAAGGCTGGTCGAGGGGTCTACAGTCGAGGAGCGACGCGGGTCCAAGTGGCTCGAGGTGCTGCTGCCACCCAAA
GAGCGGGAAGACGAGGTGATTCGCGAATCAGGCATTCTTGAAGACAACTCAGCCCAGGGAGGCGCCTCTCTAGAG
CAATCGTCGGCAGCATTGCGGCGGCTGCTGGACGAAACGGCCGACCTTATTGAATCGCCACTTTTTTGCCACGTC
TTGACGCTCAGTCTTGATGCTGCCTTTTCCCTGCTTGTTGATAGCAAGCTGGCCACTGAGGCCTTTGGCATTAGC
CCACGAACCCACCTTGTCGAGCCCGACTCGTCAGATGTGGGGAGGACCAAGGTCATACTGCTGCCCAAGATTCTG
TCGGTTCTAACGCGCCAGGCGCACGTCATTGGCAACGGCATGCCCAACGAGTACCTAGACGAGATAGAGGCGGTG
CGAGCCATTGAAGGCTTTGCAGCCGTTGTCTACTCGAGCAACTGGGAAAACGAGATGCGCGATGAAGGGTTGATG
GATGATGCCGTCCATGTGGGAAGCAGCGCACATGTAGGCGGCAGTGGCTTGTACGAGGAGCGACAGAGCGAGCAA
AGCATCGTCGTGGTGGACTCACCAAGTGGGATGCAGAGTGCATGGGAGAGGGCTGTGGATAAGAGGACGTGA
Transcript >OphauB2|6171
ATGTTGTCCTCGGTCCGACGTTGGCTGCGCAACAACTCGACGCCCATTGCCATTGGCGTGGGCGTCGTGGGCGCA
GGCTATGCCGTATCGCAATATGTTCTGTCCAAGCTCAATGACGCGCGTGAGCGCATGAGCAGTGAGCGCATCGCC
AAGGAAAACTTGCGCCGACGCTTTGAACAGAACCAAGAAGACTGCACTTTTACCGTTCTCGCCCTCCTTCCCACC
GCGACAACAAACATTCTAGCTGCTCTGAATACAGAGCAAATCACATACGAGATTCAACAAATCAAAAGCTCAGCC
AAGGCCTCCAAACTCGACGCTGGCGACTCAGCGAGCCCGCCAAGCATCGCCGACACCACCATGACGGACGAGGAC
GGAAAGAGCCTGGCCAGTATGCACAGCGACAGTGGCATTCACGCCAGTCAAATCGCTGTGCCATCGTCATCGTCA
TTCGCTGCCTCTGGGCCTCTGGGCCAGCAAGACGGCGGTGCGCAGAGGACGCGCAAGACCAAGAGGCAGCTATGG
GACGACCTGGCCATTAGCGCCGTTACAAGAGCCTTTACCCTAATCTACACCCTCTCCCTTCTCACCATGCTGACC
CGGATCCAGCTCAACCTGCTGGGCCGTCGGAGCTACCTTTCGAGCGTTGTTGCTCTCGCAACCGGCGCACAACAA
GGCACCATCAACCTGGAAAACAAGGATGACGACAACCAAGAGCAAGACTATGGCAGTGACTTCGACACAAACCGC
AAGTATTTGACGTTTAGCTGGTGGCTGCTCAACCAGGGCTGGATTCATGTAATGGAGCGTGTCGAGCGTGCCGTG
CGAAGCGTTTTTGGAAACTTGAGCCCCCGAGATCTCATCAGTCTCGACAGGTTTTCCAAGCTGACAATGGATGTG
AGAAGGCTGGTCGAGGGGTCTACAGTCGAGGAGCGACGCGGGTCCAAGTGGCTCGAGGTGCTGCTGCCACCCAAA
GAGCGGGAAGACGAGGTGATTCGCGAATCAGGCATTCTTGAAGACAACTCAGCCCAGGGAGGCGCCTCTCTAGAG
CAATCGTCGGCAGCATTGCGGCGGCTGCTGGACGAAACGGCCGACCTTATTGAATCGCCACTTTTTTGCCACGTC
TTGACGCTCAGTCTTGATGCTGCCTTTTCCCTGCTTGTTGATAGCAAGCTGGCCACTGAGGCCTTTGGCATTAGC
CCACGAACCCACCTTGTCGAGCCCGACTCGTCAGATGTGGGGAGGACCAAGGTCATACTGCTGCCCAAGATTCTG
TCGGTTCTAACGCGCCAGGCGCACGTCATTGGCAACGGCATGCCCAACGAGTACCTAGACGAGATAGAGGCGGTG
CGAGCCATTGAAGGCTTTGCAGCCGTTGTCTACTCGAGCAACTGGGAAAACGAGATGCGCGATGAAGGGTTGATG
GATGATGCCGTCCATGTGGGAAGCAGCGCACATGTAGGCGGCAGTGGCTTGTACGAGGAGCGACAGAGCGAGCAA
AGCATCGTCGTGGTGGACTCACCAAGTGGGATGCAGAGTGCATGGGAGAGGGCTGTGGATAAGAGGACGTGA
Gene >OphauB2|6171
ATGTTGTCCTCGGTCCGACGTTGGCTGCGCAACAACTCGACGCCCATTGCCATTGGCGTGGGCGTCGTGGGCGCA
GGCTATGCCGTATCGCAATATGTTCTGTCCAAGCTCAATGACGCGCGTGAGCGCATGAGCAGTGAGCGCATCGCC
AAGGAAAAGTCAGTCTCTGCTCCCTTGATGTGTGTGGTCAGGGCGCGCCGACTGACACTCCGAGCGCAGCTTGCG
CCGACGCTTTGAACAGAACCAAGAAGACTGCACTTTTACCGTTCTCGCCCTCCTTCCCACCGCGACAACAAACAT
TCTAGCTGCTCTGAATACAGAGCAAATCACATACGAGATTCAACAAATCAAAAGCTCAGCCAAGGCCTCCAAACT
CGACGCTGGCGACTCAGCGAGCCCGCCAAGCATCGCCGACACCACCATGACGGACGAGGACGGAAAGAGCCTGGC
CAGTATGCACAGCGACAGTGGCATTCACGCCAGTCAAATCGCTGTGCCATCGTCATCGTCATTCGCTGCCTCTGG
GCCTCTGGGCCAGCAAGACGGCGGTGCGCAGAGGACGCGCAAGACCAAGAGGCAGCTATGGGACGACCTGGCCAT
TAGCGGTGCGCGCTTCTCTTTTACACCTTTGATGCTTGTAGCTGATGATTACAAACCCAATAGCCGTTACAAGAG
CCTTTACCCTAATCTACACCCTCTCCCTTCTCACCATGCTGACCCGGATCCAGCTCAACCTGCTGGGCCGTCGGA
GCTACCTTTCGAGCGTTGTTGCTCTCGCAACCGGCGCACAACAAGGCACCATCAACCTGGAAAACAAGGATGACG
ACAACCAAGAGCAAGACTATGGCAGTGACTTCGACACAAACCGCAAGTATTTGACGTTTAGCTGGTGGCTGCTCA
ACCAGGGCTGGATTCATGTAATGGAGCGTGTCGAGCGTGCCGTGCGAAGCGTTTTTGGAAACTTGAGCCCCCGAG
ATCTCATCAGTCTCGACAGGTTTTCCAAGCTGACAATGGATGTGAGAAGGCTGGTCGAGGGGTCTACAGTCGAGG
AGCGACGCGGGTCCAAGTGGCTCGAGGTGCTGCTGCCACCCAAAGAGCGGGAAGACGAGGTGATTCGCGAATCAG
GCATTCTTGAAGACAACTCAGCCCAGGGAGGCGCCTCTCTAGAGCAATCGTCGGCAGCATTGCGGCGGCTGCTGG
ACGAAACGGCCGACCTTATTGAATCGCCACTTTTTTGCCACGTCTTGACGCTCAGTCTTGATGCTGCCTTTTCCC
TGCTTGTTGATAGCAAGCTGGCCACTGAGGCCTTTGGCATTAGCCCACGAACCCACCTTGTCGAGCCCGACTCGT
CAGATGTGGGGAGGACCAAGGTCATACTGCTGCCCAAGATTCTGTCGGTTCTAACGCGCCAGGCGCACGTCATTG
GCAACGGCATGCCCAACGAGTACCTAGACGAGATAGAGGCGGTGCGAGCCATTGAAGGCTTTGCAGCCGTTGTCT
ACTCGAGCAACTGGGAAAACGAGATGCGCGATGAAGGGTTGATGGATGATGCCGTCCATGTGGGAAGCAGCGCAC
ATGTAGGCGGCAGTGGCTTGTACGAGGAGCGACAGAGCGAGCAAAGCATCGTCGTGGTGGACTCACCAAGTGGGA
TGCAGAGTGCATGGGAGAGGGCTGTGGATAAGAGGACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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