© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|6150 |
| Gene name | |
| Location | Contig_53:98760..99956 |
| Strand | + |
| Gene length (bp) | 1196 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1083 |
| Protein length (aa) | 361 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01145 | Band_7 | SPFH domain / Band 7 family | 1.6E-27 | 94 | 263 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5UP73|YR614_MIMIV | Putative band 7 family protein R614 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R614 PE=3 SV=1 | 38 | 319 | 4.0E-57 |
| sp|O28852|Y1420_ARCFU | Uncharacterized protein AF_1420 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1420 PE=3 SV=1 | 101 | 304 | 4.0E-35 |
| sp|Q8TAV4|STML3_HUMAN | Stomatin-like protein 3 OS=Homo sapiens GN=STOML3 PE=2 SV=1 | 57 | 306 | 3.0E-34 |
| sp|Q6PE84|STML3_MOUSE | Stomatin-like protein 3 OS=Mus musculus GN=Stoml3 PE=1 SV=2 | 101 | 306 | 6.0E-34 |
| sp|P27105|STOM_HUMAN | Erythrocyte band 7 integral membrane protein OS=Homo sapiens GN=STOM PE=1 SV=3 | 61 | 306 | 1.0E-31 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5UP73|YR614_MIMIV | Putative band 7 family protein R614 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R614 PE=3 SV=1 | 38 | 319 | 4.0E-57 |
| sp|O28852|Y1420_ARCFU | Uncharacterized protein AF_1420 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1420 PE=3 SV=1 | 101 | 304 | 4.0E-35 |
| sp|Q8TAV4|STML3_HUMAN | Stomatin-like protein 3 OS=Homo sapiens GN=STOML3 PE=2 SV=1 | 57 | 306 | 3.0E-34 |
| sp|Q6PE84|STML3_MOUSE | Stomatin-like protein 3 OS=Mus musculus GN=Stoml3 PE=1 SV=2 | 101 | 306 | 6.0E-34 |
| sp|P27105|STOM_HUMAN | Erythrocyte band 7 integral membrane protein OS=Homo sapiens GN=STOM PE=1 SV=3 | 61 | 306 | 1.0E-31 |
| sp|P54116|STOM_MOUSE | Erythrocyte band 7 integral membrane protein OS=Mus musculus GN=Stom PE=1 SV=3 | 81 | 306 | 4.0E-30 |
| sp|Q19958|STO2_CAEEL | Stomatin-2 OS=Caenorhabditis elegans GN=sto-2 PE=3 SV=4 | 63 | 304 | 6.0E-29 |
| sp|Q16TM5|BND7A_AEDAE | Band 7 protein AAEL010189 OS=Aedes aegypti GN=AAEL010189 PE=3 SV=1 | 57 | 306 | 2.0E-27 |
| sp|O59180|PSTOM_PYRHO | Stomatin homolog PH1511 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1511 PE=1 SV=1 | 101 | 327 | 2.0E-27 |
| sp|Q21190|UNC1_CAEEL | Protein unc-1 OS=Caenorhabditis elegans GN=unc-1 PE=3 SV=2 | 39 | 304 | 3.0E-27 |
| sp|Q9V0Y1|PSTOM_PYRAB | Stomatin homolog PYRAB06580 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB06580 PE=3 SV=1 | 93 | 306 | 4.0E-27 |
| sp|Q8K4G9|PODO_RAT | Podocin OS=Rattus norvegicus GN=Nphs2 PE=1 SV=2 | 85 | 312 | 4.0E-27 |
| sp|Q27433|MEC2_CAEEL | Mechanosensory protein 2 OS=Caenorhabditis elegans GN=mec-2 PE=1 SV=1 | 63 | 304 | 6.0E-27 |
| sp|Q7PPU9|BND7A_ANOGA | Band 7 protein AGAP004871 OS=Anopheles gambiae GN=AGAP004871 PE=3 SV=3 | 86 | 306 | 1.0E-26 |
| sp|Q22165|STO4_CAEEL | Stomatin-4 OS=Caenorhabditis elegans GN=sto-4 PE=3 SV=2 | 63 | 321 | 1.0E-26 |
| sp|Q9VZA4|BND7A_DROME | Band 7 protein CG42540 OS=Drosophila melanogaster GN=CG42540 PE=2 SV=2 | 86 | 304 | 3.0E-26 |
| sp|Q91X05|PODO_MOUSE | Podocin OS=Mus musculus GN=Nphs2 PE=1 SV=2 | 85 | 304 | 5.0E-26 |
| sp|Q19200|STO1_CAEEL | Stomatin-1 OS=Caenorhabditis elegans GN=sto-1 PE=3 SV=2 | 81 | 304 | 5.0E-26 |
| sp|Q20657|STO3_CAEEL | Stomatin-3 OS=Caenorhabditis elegans GN=sto-3 PE=3 SV=1 | 102 | 303 | 3.0E-24 |
| sp|Q9NP85|PODO_HUMAN | Podocin OS=Homo sapiens GN=NPHS2 PE=1 SV=1 | 64 | 304 | 5.0E-24 |
| sp|Q58237|Y827_METJA | Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0827 PE=3 SV=1 | 95 | 263 | 5.0E-23 |
| sp|O26788|Y692_METTH | Uncharacterized protein MTH_692 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_692 PE=3 SV=1 | 91 | 286 | 9.0E-23 |
| sp|Q9UJZ1|STML2_HUMAN | Stomatin-like protein 2, mitochondrial OS=Homo sapiens GN=STOML2 PE=1 SV=1 | 95 | 267 | 2.0E-21 |
| sp|Q32LL2|STML2_BOVIN | Stomatin-like protein 2, mitochondrial OS=Bos taurus GN=STOML2 PE=2 SV=1 | 95 | 267 | 3.0E-21 |
| sp|P0AA56|QMCA_SHIFL | Protein QmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1 | 93 | 320 | 4.0E-21 |
| sp|P0AA53|QMCA_ECOLI | Protein QmcA OS=Escherichia coli (strain K12) GN=qmcA PE=1 SV=1 | 93 | 320 | 4.0E-21 |
| sp|P0AA54|QMCA_ECOL6 | Protein QmcA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=qmcA PE=3 SV=1 | 93 | 320 | 4.0E-21 |
| sp|P0AA55|QMCA_ECO57 | Protein QmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1 | 93 | 320 | 4.0E-21 |
| sp|Q4FZT0|STML2_RAT | Stomatin-like protein 2, mitochondrial OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1 | 95 | 267 | 7.0E-21 |
| sp|Q99JB2|STML2_MOUSE | Stomatin-like protein 2, mitochondrial OS=Mus musculus GN=Stoml2 PE=1 SV=1 | 95 | 267 | 8.0E-21 |
| sp|P0DKS0|QMCA_WIGBR | Protein QmcA OS=Wigglesworthia glossinidia brevipalpis GN=qmcA PE=3 SV=1 | 95 | 290 | 4.0E-17 |
| sp|O60121|YH77_SCHPO | Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16G5.07c PE=3 SV=1 | 93 | 274 | 2.0E-16 |
| sp|P63694|Y1524_MYCBO | Uncharacterized protein Mb1524 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1524 PE=3 SV=1 | 95 | 290 | 5.0E-16 |
| sp|P9WPR8|Y1488_MYCTO | Uncharacterized protein MT1533.2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1533.2 PE=3 SV=1 | 95 | 290 | 5.0E-16 |
| sp|P9WPR9|Y1488_MYCTU | Uncharacterized protein Rv1488 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1488 PE=1 SV=1 | 95 | 290 | 5.0E-16 |
| sp|P72655|Y1128_SYNY3 | Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1128 PE=3 SV=1 | 93 | 298 | 4.0E-13 |
| sp|Q9FHM7|HIR4_ARATH | Hypersensitive-induced response protein 4 OS=Arabidopsis thaliana GN=HIR4 PE=1 SV=1 | 95 | 316 | 7.0E-11 |
| sp|Q9KV09|HFLK_VIBCH | Protein HflK OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=hflK PE=3 SV=1 | 76 | 235 | 2.0E-08 |
| sp|Q9FM19|HIR1_ARATH | Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana GN=HIR1 PE=1 SV=1 | 79 | 316 | 2.0E-07 |
| sp|P44546|HFLK_HAEIN | Protein HflK OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hflK PE=3 SV=1 | 72 | 223 | 5.0E-07 |
| sp|Q9UBI4|STML1_HUMAN | Stomatin-like protein 1 OS=Homo sapiens GN=STOML1 PE=1 SV=1 | 55 | 226 | 1.0E-06 |
| sp|Q8CI66|STML1_MOUSE | Stomatin-like protein 1 OS=Mus musculus GN=Stoml1 PE=2 SV=1 | 102 | 247 | 1.0E-06 |
| sp|O83151|HFLK_TREPA | Protein HflK OS=Treponema pallidum (strain Nichols) GN=hflK PE=3 SV=1 | 61 | 256 | 1.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|6150 MSGFNGQGSSSSKPLGPGRHSALTEGSDGGFQPQANMAVIPPRQEDLQRSYATLVGDDANPKGWYGSMINALGSC LGTVGAVPCCICFPNPYKKVHQGYVGLVTKFGRFYKAVDPGLVKINPLSEELIRIDVKIQTAEVPEQFCMTKDNV TLRLTSVIYYHIVAPHKAAFGISDIRQALMERTQTTLRHVVGARVLQDVVERREEIAQSIGEIIEDVAAGWGVQV ESMLIKDIVFSQDLQESLSMAAQSKRIGESKIIAAKAEVESAKLMRQAADILSSAPAMQIRYLEAMQAMAKSANS KVIFLPGASQNLSNAINAVAASQKPGEASDALDHHGQRLAFGDEDAGFQHAINARVVENI* |
| Coding | >OphauB2|6150 ATGTCGGGCTTCAACGGCCAAGGCTCTTCATCTTCCAAGCCCCTCGGCCCTGGCCGGCACTCAGCCCTCACTGAG GGCAGCGATGGCGGCTTCCAGCCCCAGGCAAACATGGCCGTCATTCCGCCCCGGCAGGAAGATTTGCAGCGCAGC TACGCCACTCTAGTGGGCGACGACGCCAACCCAAAGGGCTGGTACGGCAGCATGATCAATGCTCTTGGCTCTTGT CTGGGTACTGTTGGTGCTGTGCCCTGCTGCATCTGTTTTCCAAACCCGTACAAAAAGGTGCATCAAGGCTATGTC GGCCTGGTGACCAAGTTTGGCCGCTTTTACAAGGCTGTCGACCCTGGCCTAGTCAAGATTAACCCTCTGAGCGAG GAGCTCATTCGCATTGATGTAAAGATTCAGACAGCAGAGGTGCCCGAGCAGTTCTGCATGACAAAGGACAATGTC ACTCTCCGCCTCACCTCCGTCATTTACTACCACATTGTTGCTCCACACAAGGCTGCATTTGGCATCTCGGATATT CGTCAGGCCCTCATGGAACGCACGCAGACTACCTTGCGCCACGTGGTCGGCGCCCGTGTACTGCAAGATGTTGTA GAGCGCCGCGAGGAAATCGCACAGTCGATTGGCGAAATCATTGAGGACGTGGCTGCCGGATGGGGAGTCCAGGTC GAGAGCATGCTCATCAAGGATATCGTTTTTAGTCAGGATCTTCAGGAGTCGCTTTCCATGGCCGCCCAGAGTAAG CGCATCGGCGAAAGCAAGATTATTGCCGCCAAGGCAGAGGTCGAGTCTGCAAAGCTGATGCGTCAGGCTGCCGAT ATCCTCAGCTCGGCACCTGCCATGCAGATTCGCTATCTCGAGGCCATGCAAGCCATGGCCAAGTCTGCAAATAGC AAGGTCATCTTCCTGCCAGGCGCCAGCCAGAACCTTAGCAACGCCATCAACGCTGTTGCTGCATCGCAGAAGCCT GGTGAGGCAAGCGACGCCCTCGACCACCATGGCCAACGGCTCGCTTTTGGTGATGAGGACGCTGGCTTCCAGCAT GCCATCAATGCTCGTGTCGTGGAGAACATCTAA |
| Transcript | >OphauB2|6150 ATGTCGGGCTTCAACGGCCAAGGCTCTTCATCTTCCAAGCCCCTCGGCCCTGGCCGGCACTCAGCCCTCACTGAG GGCAGCGATGGCGGCTTCCAGCCCCAGGCAAACATGGCCGTCATTCCGCCCCGGCAGGAAGATTTGCAGCGCAGC TACGCCACTCTAGTGGGCGACGACGCCAACCCAAAGGGCTGGTACGGCAGCATGATCAATGCTCTTGGCTCTTGT CTGGGTACTGTTGGTGCTGTGCCCTGCTGCATCTGTTTTCCAAACCCGTACAAAAAGGTGCATCAAGGCTATGTC GGCCTGGTGACCAAGTTTGGCCGCTTTTACAAGGCTGTCGACCCTGGCCTAGTCAAGATTAACCCTCTGAGCGAG GAGCTCATTCGCATTGATGTAAAGATTCAGACAGCAGAGGTGCCCGAGCAGTTCTGCATGACAAAGGACAATGTC ACTCTCCGCCTCACCTCCGTCATTTACTACCACATTGTTGCTCCACACAAGGCTGCATTTGGCATCTCGGATATT CGTCAGGCCCTCATGGAACGCACGCAGACTACCTTGCGCCACGTGGTCGGCGCCCGTGTACTGCAAGATGTTGTA GAGCGCCGCGAGGAAATCGCACAGTCGATTGGCGAAATCATTGAGGACGTGGCTGCCGGATGGGGAGTCCAGGTC GAGAGCATGCTCATCAAGGATATCGTTTTTAGTCAGGATCTTCAGGAGTCGCTTTCCATGGCCGCCCAGAGTAAG CGCATCGGCGAAAGCAAGATTATTGCCGCCAAGGCAGAGGTCGAGTCTGCAAAGCTGATGCGTCAGGCTGCCGAT ATCCTCAGCTCGGCACCTGCCATGCAGATTCGCTATCTCGAGGCCATGCAAGCCATGGCCAAGTCTGCAAATAGC AAGGTCATCTTCCTGCCAGGCGCCAGCCAGAACCTTAGCAACGCCATCAACGCTGTTGCTGCATCGCAGAAGCCT GGTGAGGCAAGCGACGCCCTCGACCACCATGGCCAACGGCTCGCTTTTGGTGATGAGGACGCTGGCTTCCAGCAT GCCATCAATGCTCGTGTCGTGGAGAACATCTAA |
| Gene | >OphauB2|6150 ATGTCGGGCTTCAACGGCCAAGGCTCTTCATCTTCCAAGCCCCTCGGCCCTGGCCGGCACTCAGCCCTCACTGAG GGCAGCGATGGCGGCTTCCAGCCCCAGGCAAACATGGCCGTCATTCCGCCCCGGCAGGAAGATTTGCAGCGCAGC TACGCCACTCTAGTGGGCGACGACGCCAACCCAAAGGGCTGGTACGGCAGCATGAGTATGCACAAGCCTGCATCC TTGATTGCCCTCGCCTCTGACACTTTATCGCAGTCAATGCTCTTGGCTCTTGTCTGGGTACTGTTGGTGCTGTGC CCTGCTGCATCTGTTTTCCAAACCCGTACAAAAAGGTGCATCAAGGCTATGTCGGCCTGGTGACCAAGTTTGGCC GCTTTTACAAGGCTGTCGACCCTGGCCTAGTCAAGATTAACCCTCTGAGCGAGGAGCTCATTCGCATTGATGTAA AGATTCAGACAGCAGAGGTGCCCGAGCAGTTCTGCATGACAAAGGACAATGTCACTCTCCGCCTCACCTCCGTCA TTTACTACCACATTGTTGCTCCACACAAGGCTGCATTTGGCATCTCGGATATTCGTCAGGCCCTCATGGAACGCA CGCAGACTACCTTGCGCCACGTGGTCGGCGCCCGTGTACTGCAAGATGTTGTAGAGCGCCGCGAGGAAATCGCAC AGTCGATTGGCGAAATCATTGAGGACGTGGCTGCCGGATGGGGAGTCCAGGTCGAGAGCATGCTCATCAAGGATA TCGTTTTTAGTCAGGATCTTCAGGAGTCGCTTTCCATGGCCGCCCAGAGTAAGCGCATCGGCGAAAGCAAGATTA TTGCCGCCAAGGCAGAGGTTTGTCTTTTGCCAAGCCCACGCCATATTCTTTTTCAATACTAATGTTACCTTGCCC AGGTCGAGTCTGCAAAGCTGATGCGTCAGGCTGCCGATATCCTCAGCTCGGCACCTGCCATGCAGATTCGCTATC TCGAGGCCATGCAAGCCATGGCCAAGTCTGCAAATAGCAAGGTCATCTTCCTGCCAGGCGCCAGCCAGAACCTTA GCAACGCCATCAACGCTGTTGCTGCATCGCAGAAGCCTGGTGAGGCAAGCGACGCCCTCGACCACCATGGCCAAC GGCTCGCTTTTGGTGATGAGGACGCTGGCTTCCAGCATGCCATCAATGCTCGTGTCGTGGAGAACATCTAA |