Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6145
Gene name
LocationContig_53:87450..88289
Strand-
Gene length (bp)839
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13640 2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily 9.4E-11 125 247

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9ZW86|P4H1_ARATH Prolyl 4-hydroxylase 1 OS=Arabidopsis thaliana GN=P4H1 PE=1 SV=1 40 248 1.0E-20
sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana GN=P4H4 PE=2 SV=1 38 245 1.0E-18
sp|F4JAU3|P4H2_ARATH Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana GN=P4H2 PE=1 SV=1 38 245 1.0E-17
sp|Q8L970|P4H7_ARATH Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana GN=P4H7 PE=2 SV=1 38 245 3.0E-15
sp|F4J0A8|P4H6_ARATH Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana GN=P4H6 PE=2 SV=1 42 245 1.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|Q9ZW86|P4H1_ARATH Prolyl 4-hydroxylase 1 OS=Arabidopsis thaliana GN=P4H1 PE=1 SV=1 40 248 1.0E-20
sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana GN=P4H4 PE=2 SV=1 38 245 1.0E-18
sp|F4JAU3|P4H2_ARATH Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana GN=P4H2 PE=1 SV=1 38 245 1.0E-17
sp|Q8L970|P4H7_ARATH Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana GN=P4H7 PE=2 SV=1 38 245 3.0E-15
sp|F4J0A8|P4H6_ARATH Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana GN=P4H6 PE=2 SV=1 42 245 1.0E-14
sp|Q24JN5|P4H5_ARATH Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana GN=P4H5 PE=2 SV=1 39 245 9.0E-14
sp|F4JZ24|P4H10_ARATH Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana GN=P4H10 PE=2 SV=1 39 247 2.0E-13
sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1 46 248 3.0E-13
sp|F4JNU8|P4H8_ARATH Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana GN=P4H8 PE=3 SV=1 39 245 3.0E-13
sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1 45 248 3.0E-13
sp|Q9LN20|P4H3_ARATH Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana GN=P4H3 PE=2 SV=1 23 245 2.0E-12
sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1 39 248 2.0E-11
sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L593 PE=1 SV=1 44 248 2.0E-11
sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=1 SV=1 45 248 7.0E-11
sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1 SV=1 39 248 1.0E-10
sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1 45 248 3.0E-10
sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2 21 248 9.0E-10
sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1 14 248 2.0E-09
sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2 SV=1 39 248 3.0E-09
sp|F4ILF8|P4H13_ARATH Prolyl 4-hydroxylase 13 OS=Arabidopsis thaliana GN=P4H13 PE=2 SV=1 29 248 3.0E-09
sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1 21 248 6.0E-09
sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=1 SV=2 70 248 1.0E-08
sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1 21 248 4.0E-08
sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2 21 248 4.0E-08
sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=1 SV=1 48 250 1.0E-07
sp|Q8VZJ7|P4H9_ARATH Probable prolyl 4-hydroxylase 9 OS=Arabidopsis thaliana GN=P4H9 PE=2 SV=1 40 248 1.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6145
MARLVVTITIVAALSLSLADQVGLGAQHDSGCRHPGYQVHLVSSSPLVMYLEGFLTADERAHLEQVGQGRFSDSA
VVAASGEAAIHQVRTSQSTAVERDAVVRCIEQRALSLQGFDRLASQLEPMQLVRYGPQQRYHLHTDWFTDPTHAA
AQQGGNRASSIFGYVKAHKLTGGGTHFPLLDVPRNERWCRFVDCDAEYDSGLTFRPIEGNAVYWDNMLEPGRGDE
RTLHAGLPVVSGDKIGINIWTREAPLPPNLRDTSL*
Coding >OphauB2|6145
ATGGCTCGTCTAGTAGTCACGATTACCATTGTGGCGGCGCTCAGCCTCTCTCTTGCAGACCAAGTTGGCCTTGGA
GCGCAGCACGACAGCGGCTGCAGGCACCCGGGATACCAGGTCCATCTCGTCAGCTCCTCGCCGCTCGTCATGTAC
CTCGAGGGCTTTCTCACAGCCGACGAGAGAGCGCACCTCGAGCAGGTCGGCCAGGGACGCTTCAGCGACTCGGCC
GTGGTGGCGGCATCGGGCGAGGCAGCAATCCACCAAGTGCGCACGTCGCAGTCGACAGCGGTGGAGCGCGACGCC
GTTGTGCGATGCATTGAGCAGAGGGCACTGTCTCTCCAGGGCTTTGATAGGCTGGCGTCGCAGCTGGAGCCCATG
CAGCTGGTGCGATACGGGCCGCAGCAGCGCTACCACTTACACACCGACTGGTTCACCGACCCAACACACGCAGCG
GCACAGCAGGGCGGCAATCGGGCCAGCTCCATCTTTGGCTATGTCAAGGCGCACAAGCTGACGGGAGGCGGCACC
CACTTTCCGCTGCTCGACGTGCCGCGCAATGAGCGCTGGTGTCGCTTCGTCGACTGCGACGCCGAGTACGACAGC
GGCCTGACTTTCCGGCCCATTGAGGGCAACGCCGTCTACTGGGACAATATGCTGGAGCCGGGCCGTGGCGACGAG
CGCACCCTGCACGCCGGCCTGCCCGTCGTCAGCGGCGACAAGATTGGCATCAACATTTGGACGCGAGAGGCGCCG
CTGCCGCCCAACTTGCGCGACACGTCTTTGTAA
Transcript >OphauB2|6145
ATGGCTCGTCTAGTAGTCACGATTACCATTGTGGCGGCGCTCAGCCTCTCTCTTGCAGACCAAGTTGGCCTTGGA
GCGCAGCACGACAGCGGCTGCAGGCACCCGGGATACCAGGTCCATCTCGTCAGCTCCTCGCCGCTCGTCATGTAC
CTCGAGGGCTTTCTCACAGCCGACGAGAGAGCGCACCTCGAGCAGGTCGGCCAGGGACGCTTCAGCGACTCGGCC
GTGGTGGCGGCATCGGGCGAGGCAGCAATCCACCAAGTGCGCACGTCGCAGTCGACAGCGGTGGAGCGCGACGCC
GTTGTGCGATGCATTGAGCAGAGGGCACTGTCTCTCCAGGGCTTTGATAGGCTGGCGTCGCAGCTGGAGCCCATG
CAGCTGGTGCGATACGGGCCGCAGCAGCGCTACCACTTACACACCGACTGGTTCACCGACCCAACACACGCAGCG
GCACAGCAGGGCGGCAATCGGGCCAGCTCCATCTTTGGCTATGTCAAGGCGCACAAGCTGACGGGAGGCGGCACC
CACTTTCCGCTGCTCGACGTGCCGCGCAATGAGCGCTGGTGTCGCTTCGTCGACTGCGACGCCGAGTACGACAGC
GGCCTGACTTTCCGGCCCATTGAGGGCAACGCCGTCTACTGGGACAATATGCTGGAGCCGGGCCGTGGCGACGAG
CGCACCCTGCACGCCGGCCTGCCCGTCGTCAGCGGCGACAAGATTGGCATCAACATTTGGACGCGAGAGGCGCCG
CTGCCGCCCAACTTGCGCGACACGTCTTTGTAA
Gene >OphauB2|6145
ATGGCTCGTCTAGTAGTCACGATTACCATTGTGGCGGCGCTCAGCCTCTCTCTTGCAGACCAAGTTGGCCTTGGA
GCGCAGCACGACAGCGGCTGCAGGCACCCGGGATACCAGGTCCATCTCGTCAGCTCCTCGCCGCTCGTCATGTAC
CTCGAGGGCTTTCTCACAGCCGACGAGAGAGCGCACCTCGAGCAGGTCGGGTAGGCAGCTTCCCGGGCAAGGCGG
CAAGGAGCAAAAAGACTGACACTTGGGACAGCCAGGGACGCTTCAGCGACTCGGCCGTGGTGGCGGCATCGGGCG
AGGCAGCAATCCACCAAGTGCGCACGTCGCAGTCGACAGCGGTGGAGCGCGACGCCGTTGTGCGATGCATTGAGC
AGAGGGCACTGTCTCTCCAGGGCTTTGATAGGCTGGCGTCGCAGCTGGAGCCCATGCAGCTGGTGCGATACGGGC
CGCAGCAGCGCTACCACTTACACACCGACTGGTTCACCGACCCAACACACGCAGCGGCACAGCAGGGCGGCAATC
GGGCCAGCTCCATCTTTGGCTATGTCAAGGCGCACAAGCTGACGGGAGGCGGCACCCACTTTCCGCTGCTCGACG
TGCCGCGCAATGAGCGCTGGTGTCGCTTCGTCGACTGCGACGCCGAGTACGACAGCGGCCTGACTTTCCGGCCCA
TTGAGGGCAACGCCGTCTACTGGGACAATATGCTGGAGCCGGGCCGTGGCGACGAGCGCACCCTGCACGCCGGCC
TGCCCGTCGTCAGCGGCGACAAGATTGGCATCAACATTTGGACGCGAGAGGCGCCGCTGCCGCCCAACTTGCGCG
ACACGTCTTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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