Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|6110
Gene name
LocationContig_520:530..1476
Strand+
Gene length (bp)946
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01375 Enterotoxin_a Heat-labile enterotoxin alpha chain 6.2E-18 46 246

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 40 244 3.0E-09
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 40 244 3.0E-09
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 40 241 4.0E-06

GO

GO Term Description Terminal node
GO:0090729 toxin activity Yes
GO:0005615 extracellular space Yes
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|6110
MKTPELTLFLWAIGLLLLGRGQGSPIPEGKSDTAHRPSIVWRGESTQRGPKDVEEDGGFWARGEGIQELTKEQMQ
EGSSLEQHVFGQTLPYTKFVSTSSEPKMALEFADEFERGPNYVWFGYLYKIAADWKMIDLEDSLKHRYRGAHRKE
QSAVIGIPFEQIIGWYDLRKVGPEWGKNTASVTERLKKGETLDGFVNNEHFDPRYLKTRGAGGKPQLAGFHPDDD
LWNSEPWNKFPGHSAPEALKKYIQENYDPEIDDERIWKWAVEPQSQEADRMANMEAQRRLGEN*
Coding >OphauB2|6110
ATGAAAACGCCCGAGCTCACTCTCTTCTTATGGGCGATAGGCTTACTACTTCTTGGGCGTGGACAAGGCTCGCCT
ATACCCGAGGGAAAGTCTGATACGGCTCACCGGCCGAGTATCGTTTGGCGTGGCGAATCGACGCAACGAGGGCCC
AAGGATGTTGAGGAAGACGGAGGCTTCTGGGCGAGAGGCGAAGGAATTCAAGAACTTACAAAAGAACAAATGCAA
GAAGGCAGCAGTCTAGAGCAGCACGTTTTTGGTCAAACTTTGCCGTACACAAAATTTGTTTCAACAAGCTCCGAA
CCAAAAATGGCACTAGAGTTTGCAGATGAGTTTGAGCGAGGTCCAAACTATGTCTGGTTTGGCTACCTTTACAAA
ATTGCTGCCGACTGGAAAATGATTGATCTTGAAGACTCACTCAAACATCGATACCGCGGGGCGCACCGTAAGGAA
CAAAGTGCCGTTATAGGCATCCCGTTTGAGCAAATTATTGGTTGGTACGATTTACGAAAAGTTGGACCCGAATGG
GGAAAGAATACCGCGAGCGTCACCGAACGGCTCAAAAAAGGCGAGACGCTGGATGGTTTTGTAAACAATGAGCAC
TTTGACCCAAGGTACCTCAAGACAAGAGGCGCCGGCGGAAAGCCCCAACTCGCAGGGTTTCATCCTGACGACGAT
CTCTGGAACAGCGAGCCGTGGAACAAATTCCCAGGCCACTCGGCACCAGAAGCTCTCAAGAAATACATACAAGAG
AATTATGACCCCGAAATCGACGATGAGCGCATCTGGAAATGGGCCGTGGAGCCTCAGAGTCAAGAAGCCGACAGA
ATGGCAAACATGGAAGCACAACGGCGCCTCGGAGAGAATTAG
Transcript >OphauB2|6110
ATGAAAACGCCCGAGCTCACTCTCTTCTTATGGGCGATAGGCTTACTACTTCTTGGGCGTGGACAAGGCTCGCCT
ATACCCGAGGGAAAGTCTGATACGGCTCACCGGCCGAGTATCGTTTGGCGTGGCGAATCGACGCAACGAGGGCCC
AAGGATGTTGAGGAAGACGGAGGCTTCTGGGCGAGAGGCGAAGGAATTCAAGAACTTACAAAAGAACAAATGCAA
GAAGGCAGCAGTCTAGAGCAGCACGTTTTTGGTCAAACTTTGCCGTACACAAAATTTGTTTCAACAAGCTCCGAA
CCAAAAATGGCACTAGAGTTTGCAGATGAGTTTGAGCGAGGTCCAAACTATGTCTGGTTTGGCTACCTTTACAAA
ATTGCTGCCGACTGGAAAATGATTGATCTTGAAGACTCACTCAAACATCGATACCGCGGGGCGCACCGTAAGGAA
CAAAGTGCCGTTATAGGCATCCCGTTTGAGCAAATTATTGGTTGGTACGATTTACGAAAAGTTGGACCCGAATGG
GGAAAGAATACCGCGAGCGTCACCGAACGGCTCAAAAAAGGCGAGACGCTGGATGGTTTTGTAAACAATGAGCAC
TTTGACCCAAGGTACCTCAAGACAAGAGGCGCCGGCGGAAAGCCCCAACTCGCAGGGTTTCATCCTGACGACGAT
CTCTGGAACAGCGAGCCGTGGAACAAATTCCCAGGCCACTCGGCACCAGAAGCTCTCAAGAAATACATACAAGAG
AATTATGACCCCGAAATCGACGATGAGCGCATCTGGAAATGGGCCGTGGAGCCTCAGAGTCAAGAAGCCGACAGA
ATGGCAAACATGGAAGCACAACGGCGCCTCGGAGAGAATTAG
Gene >OphauB2|6110
ATGAAAACGCCCGAGCTCACTCTCTTCTTATGGGCGATAGGCTTACTACTTCTTGGGCGTGGACAAGGCTCGCCT
ATACCCGAGGGAAAGTCTGATACGGCTCACCGGCCGAGTATCGTTTGGCGTGGCGAATCGACGCAACGAGGGCCC
AAGGATGTTGAGGAAGACGGAGGCTTCTGGGCGAGAGGCGAAGGAATTCAAGAACTTACAAAAGAACAAATGCAA
GAAGGCAGCAGTCTAGAGCAGCACGTTTTTGGTCAAACTTTGCCGTACACAAAATTTGTTTCAACAAGCTCCGAA
CCAAAAATGGCACTAGAGTTTGCAGATGAGTTTGAGCGAGGTCCAAACTATGTCTGGTTTGGCTACCTTTACAAA
ATTGCTGCCGACTGGAAAATGATTGATCTTGAAGACTCACTCAAACATCGATACCGCGGGGCGCACCGTAAGGAA
CAAAGTGCCGTTATAGGCATCCCGTTTGAGCAAATTATTGGTTGGTACGATTTACGAAAAGTTGGACCCGAATGG
GGAAAGAATACCGCGAGCGTCACCGAACGGCTCAAAAAAGGCGAGACGCTGGATGGTTTTGTAAACAATGAGCAC
TTTGACCCAAGGTACCTCAAGACAAGAGGCGCCGGCGGAAAGCCCCAACTCGCAGGGTTTCATCCTGACGACGAT
CTCTGGAACAGCGAGCCGTGGAACAAATTCCCAGGCCACTCGGCACCAGAAGCTCTCAAGAAATACATACAAGAG
AATTATGACCCCGAAATCGACGATGAGCGCATCTGGAAATGGGCCGTGGAGCCTCAGAGTCAAGAAGCCGACAGA
ATGGCAAACATGGAAGCACAAGTAGCCAACAAGGCAGCTAAAACGCCAAAGTTGATGGGTGCCGCCTTTTACGGT
CCGGGTACCTCGACATTACAGATAGCGGCGCCTCGGAGAGAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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