Protein ID | OphauB2|6110 |
Gene name | |
Location | Contig_520:530..1476 |
Strand | + |
Gene length (bp) | 946 |
Transcript length (bp) | 867 |
Coding sequence length (bp) | 867 |
Protein length (aa) | 289 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 6.2E-18 | 46 | 246 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 40 | 244 | 3.0E-09 |
sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 40 | 244 | 3.0E-09 |
sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 40 | 241 | 4.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0090729 | toxin activity | Yes |
GO:0005615 | extracellular space | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0003674 | molecular_function | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999747 |
Orthofinder run ID | 4 |
Orthogroup | 462 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|6110 MKTPELTLFLWAIGLLLLGRGQGSPIPEGKSDTAHRPSIVWRGESTQRGPKDVEEDGGFWARGEGIQELTKEQMQ EGSSLEQHVFGQTLPYTKFVSTSSEPKMALEFADEFERGPNYVWFGYLYKIAADWKMIDLEDSLKHRYRGAHRKE QSAVIGIPFEQIIGWYDLRKVGPEWGKNTASVTERLKKGETLDGFVNNEHFDPRYLKTRGAGGKPQLAGFHPDDD LWNSEPWNKFPGHSAPEALKKYIQENYDPEIDDERIWKWAVEPQSQEADRMANMEAQRRLGEN* |
Coding | >OphauB2|6110 ATGAAAACGCCCGAGCTCACTCTCTTCTTATGGGCGATAGGCTTACTACTTCTTGGGCGTGGACAAGGCTCGCCT ATACCCGAGGGAAAGTCTGATACGGCTCACCGGCCGAGTATCGTTTGGCGTGGCGAATCGACGCAACGAGGGCCC AAGGATGTTGAGGAAGACGGAGGCTTCTGGGCGAGAGGCGAAGGAATTCAAGAACTTACAAAAGAACAAATGCAA GAAGGCAGCAGTCTAGAGCAGCACGTTTTTGGTCAAACTTTGCCGTACACAAAATTTGTTTCAACAAGCTCCGAA CCAAAAATGGCACTAGAGTTTGCAGATGAGTTTGAGCGAGGTCCAAACTATGTCTGGTTTGGCTACCTTTACAAA ATTGCTGCCGACTGGAAAATGATTGATCTTGAAGACTCACTCAAACATCGATACCGCGGGGCGCACCGTAAGGAA CAAAGTGCCGTTATAGGCATCCCGTTTGAGCAAATTATTGGTTGGTACGATTTACGAAAAGTTGGACCCGAATGG GGAAAGAATACCGCGAGCGTCACCGAACGGCTCAAAAAAGGCGAGACGCTGGATGGTTTTGTAAACAATGAGCAC TTTGACCCAAGGTACCTCAAGACAAGAGGCGCCGGCGGAAAGCCCCAACTCGCAGGGTTTCATCCTGACGACGAT CTCTGGAACAGCGAGCCGTGGAACAAATTCCCAGGCCACTCGGCACCAGAAGCTCTCAAGAAATACATACAAGAG AATTATGACCCCGAAATCGACGATGAGCGCATCTGGAAATGGGCCGTGGAGCCTCAGAGTCAAGAAGCCGACAGA ATGGCAAACATGGAAGCACAACGGCGCCTCGGAGAGAATTAG |
Transcript | >OphauB2|6110 ATGAAAACGCCCGAGCTCACTCTCTTCTTATGGGCGATAGGCTTACTACTTCTTGGGCGTGGACAAGGCTCGCCT ATACCCGAGGGAAAGTCTGATACGGCTCACCGGCCGAGTATCGTTTGGCGTGGCGAATCGACGCAACGAGGGCCC AAGGATGTTGAGGAAGACGGAGGCTTCTGGGCGAGAGGCGAAGGAATTCAAGAACTTACAAAAGAACAAATGCAA GAAGGCAGCAGTCTAGAGCAGCACGTTTTTGGTCAAACTTTGCCGTACACAAAATTTGTTTCAACAAGCTCCGAA CCAAAAATGGCACTAGAGTTTGCAGATGAGTTTGAGCGAGGTCCAAACTATGTCTGGTTTGGCTACCTTTACAAA ATTGCTGCCGACTGGAAAATGATTGATCTTGAAGACTCACTCAAACATCGATACCGCGGGGCGCACCGTAAGGAA CAAAGTGCCGTTATAGGCATCCCGTTTGAGCAAATTATTGGTTGGTACGATTTACGAAAAGTTGGACCCGAATGG GGAAAGAATACCGCGAGCGTCACCGAACGGCTCAAAAAAGGCGAGACGCTGGATGGTTTTGTAAACAATGAGCAC TTTGACCCAAGGTACCTCAAGACAAGAGGCGCCGGCGGAAAGCCCCAACTCGCAGGGTTTCATCCTGACGACGAT CTCTGGAACAGCGAGCCGTGGAACAAATTCCCAGGCCACTCGGCACCAGAAGCTCTCAAGAAATACATACAAGAG AATTATGACCCCGAAATCGACGATGAGCGCATCTGGAAATGGGCCGTGGAGCCTCAGAGTCAAGAAGCCGACAGA ATGGCAAACATGGAAGCACAACGGCGCCTCGGAGAGAATTAG |
Gene | >OphauB2|6110 ATGAAAACGCCCGAGCTCACTCTCTTCTTATGGGCGATAGGCTTACTACTTCTTGGGCGTGGACAAGGCTCGCCT ATACCCGAGGGAAAGTCTGATACGGCTCACCGGCCGAGTATCGTTTGGCGTGGCGAATCGACGCAACGAGGGCCC AAGGATGTTGAGGAAGACGGAGGCTTCTGGGCGAGAGGCGAAGGAATTCAAGAACTTACAAAAGAACAAATGCAA GAAGGCAGCAGTCTAGAGCAGCACGTTTTTGGTCAAACTTTGCCGTACACAAAATTTGTTTCAACAAGCTCCGAA CCAAAAATGGCACTAGAGTTTGCAGATGAGTTTGAGCGAGGTCCAAACTATGTCTGGTTTGGCTACCTTTACAAA ATTGCTGCCGACTGGAAAATGATTGATCTTGAAGACTCACTCAAACATCGATACCGCGGGGCGCACCGTAAGGAA CAAAGTGCCGTTATAGGCATCCCGTTTGAGCAAATTATTGGTTGGTACGATTTACGAAAAGTTGGACCCGAATGG GGAAAGAATACCGCGAGCGTCACCGAACGGCTCAAAAAAGGCGAGACGCTGGATGGTTTTGTAAACAATGAGCAC TTTGACCCAAGGTACCTCAAGACAAGAGGCGCCGGCGGAAAGCCCCAACTCGCAGGGTTTCATCCTGACGACGAT CTCTGGAACAGCGAGCCGTGGAACAAATTCCCAGGCCACTCGGCACCAGAAGCTCTCAAGAAATACATACAAGAG AATTATGACCCCGAAATCGACGATGAGCGCATCTGGAAATGGGCCGTGGAGCCTCAGAGTCAAGAAGCCGACAGA ATGGCAAACATGGAAGCACAAGTAGCCAACAAGGCAGCTAAAACGCCAAAGTTGATGGGTGCCGCCTTTTACGGT CCGGGTACCTCGACATTACAGATAGCGGCGCCTCGGAGAGAATTAG |